TCONS_00000663-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00000663-protein
Unique Name	TCONS_00000663-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	438

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00000663-protein ID=TCONS_00000663-protein|Name=TCONS_00000663-protein|organism=Clytia hemisphaerica|type=polypeptide|length=438bp
FQMKIENNENNETVENESYRNPSPPPLTDAEKESVTGDLIGNTIFSQRWV
LDVLLKLYKHEEDTIYTSLVENIKNEEKEQGSEHTSDNNERFLKDDFEND
LCQLWDMTANSEVALFITEHDSKNILLDALRQTQSPRLMEICFGILGNLF
CVKEIGSSLSQDGEMRCEILSYLTVMDALSLVELTRLLCTCLSCHSTLLL
WVNDCCQGKNLEHLLYLLNNTLNVTLLCHVVKNLEIIFDECEDPLDSFIT
SEFIDGVIESFDSLNEKGDRVEYLVSMIYLLQILTTNNKGNEIISNKKET
LLHLFSKYYHLADVKGGCEMTESNRLTIYASILSILDSLVSEHKEIVSEK
NRKFVQQSVEYFSRYITDELQDENTNEFQVVVLCFEHLASLLTKLESGVL
NLYKEAVDKLMNAIKSSKFASTFLGYFTKPVLLVEFQS

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_000409	XLOC_000409	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00000663	TCONS_00000663	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011989	ARM-like

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 38..426 e-value: 2.1E-6 score: 25.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..33

Blast

[Close]

BLAST of TCONS_00000663-protein vs. Swiss-Prot (Human)
Match: SAAL1 (Protein SAAL1 OS=Homo sapiens GN=SAAL1 PE=1 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 1.695e-36
Identity = 99/359 (27.58%), Postives = 184/359 (51.25%), Query Frame = 0

Query:   20 RNPSPPPL---TDAEKESVTGDLIGNTIFSQRWVLDVLLKLYKHEEDTIYTSLVENIKNEEKEQGSEHTSDNNERF--LKDDFENDLCQLWDMTANSEVALFITEHDSKNILLDALRQTQSPRLMEICFGILGNLFCVKEIGSSLSQDGEMRCEILSYLTVMDALSLVELTRLLCTCLSCHSTLLLWVNDCCQGKNL-EHLLYLLNNTLNVTLLCHVVKNLEIIFDECEDPLDSFITSEFI-DGVIESFDSLNE---------------------KGDRVEYLVSMIYLLQILTTNNKGNEIISNKKETLLHLFSKYYHLADVKGGCEMTES-----NRLTIYASILSILDSLVSEHKE 345
            RNPSPPP     + E+E   GD IG+T++S+ W+  VL            + L++ +  E     ++ +SD+ E+   L ++ EN++C++WDM+ + +VALF+ E ++ +I +  L +++ PRL EIC GILGN+ C +EI  S+S D  +   +L  L   D  +L+E +RLL TCLS      +WV    +   + + + ++++++ NV LL  V + ++ +FD     LD  +  E++ +G  +  D   E                     + +  E+L   +++LQ+LTT + G + I +  +T   +++  + L      C+  +       + T+ AS+ S+L ++ +   E
Sbjct:    3 RNPSPPPPGRDKEEEEEVAGGDCIGSTVYSKHWLFGVL------------SGLIQIVSPE----NTKSSSDDEEQLTELDEEMENEICRVWDMSMDEDVALFLQEFNAPDIFMGVLAKSKCPRLREICVGILGNMACFQEICVSISSDKNLGQVLLHCLYDSDPPTLLETSRLLLTCLSQAEVASVWVERIQEHPAIYDSICFIMSSSTNVDLLVKVGEVVDKLFD-----LDEKLMLEWVRNGAAQPLDQPQEESEEQPVFRLVPCILEAAKQVRSENPEWLDVYMHILQLLTTVDDGIQAIVHCPDTGKDIWNLLFDLV-CHEFCQSDDPPIILQEQKTVLASVFSVLSAIYASQTE 339

The following BLAST results are available for this feature:

BLAST of TCONS_00000663-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00000663-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
SAAL1	1.695e-36	27.58	Protein SAAL1 OS=Homo sapiens GN=SAAL1 PE=1 SV=2	[more]

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TCONS_00000663-protein (polypeptide) - C. hemisphaerica