TCONS_00000663-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00000663-protein
Unique NameTCONS_00000663-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length438

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00000663-protein ID=TCONS_00000663-protein|Name=TCONS_00000663-protein|organism=Clytia hemisphaerica|type=polypeptide|length=438bp
FQMKIENNENNETVENESYRNPSPPPLTDAEKESVTGDLIGNTIFSQRWV
LDVLLKLYKHEEDTIYTSLVENIKNEEKEQGSEHTSDNNERFLKDDFEND
LCQLWDMTANSEVALFITEHDSKNILLDALRQTQSPRLMEICFGILGNLF
CVKEIGSSLSQDGEMRCEILSYLTVMDALSLVELTRLLCTCLSCHSTLLL
WVNDCCQGKNLEHLLYLLNNTLNVTLLCHVVKNLEIIFDECEDPLDSFIT
SEFIDGVIESFDSLNEKGDRVEYLVSMIYLLQILTTNNKGNEIISNKKET
LLHLFSKYYHLADVKGGCEMTESNRLTIYASILSILDSLVSEHKEIVSEK
NRKFVQQSVEYFSRYITDELQDENTNEFQVVVLCFEHLASLLTKLESGVL
NLYKEAVDKLMNAIKSSKFASTFLGYFTKPVLLVEFQS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_000409XLOC_000409Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00000663TCONS_00000663Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 38..426
e-value: 2.1E-6
score: 25.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..33

Blast
BLAST of TCONS_00000663-protein vs. Swiss-Prot (Human)
Match: SAAL1 (Protein SAAL1 OS=Homo sapiens GN=SAAL1 PE=1 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 1.695e-36
Identity = 99/359 (27.58%), Postives = 184/359 (51.25%), Query Frame = 0
Query:   20 RNPSPPPL---TDAEKESVTGDLIGNTIFSQRWVLDVLLKLYKHEEDTIYTSLVENIKNEEKEQGSEHTSDNNERF--LKDDFENDLCQLWDMTANSEVALFITEHDSKNILLDALRQTQSPRLMEICFGILGNLFCVKEIGSSLSQDGEMRCEILSYLTVMDALSLVELTRLLCTCLSCHSTLLLWVNDCCQGKNL-EHLLYLLNNTLNVTLLCHVVKNLEIIFDECEDPLDSFITSEFI-DGVIESFDSLNE---------------------KGDRVEYLVSMIYLLQILTTNNKGNEIISNKKETLLHLFSKYYHLADVKGGCEMTES-----NRLTIYASILSILDSLVSEHKE 345
            RNPSPPP     + E+E   GD IG+T++S+ W+  VL            + L++ +  E     ++ +SD+ E+   L ++ EN++C++WDM+ + +VALF+ E ++ +I +  L +++ PRL EIC GILGN+ C +EI  S+S D  +   +L  L   D  +L+E +RLL TCLS      +WV    +   + + + ++++++ NV LL  V + ++ +FD     LD  +  E++ +G  +  D   E                     + +  E+L   +++LQ+LTT + G + I +  +T   +++  + L      C+  +       + T+ AS+ S+L ++ +   E
Sbjct:    3 RNPSPPPPGRDKEEEEEVAGGDCIGSTVYSKHWLFGVL------------SGLIQIVSPE----NTKSSSDDEEQLTELDEEMENEICRVWDMSMDEDVALFLQEFNAPDIFMGVLAKSKCPRLREICVGILGNMACFQEICVSISSDKNLGQVLLHCLYDSDPPTLLETSRLLLTCLSQAEVASVWVERIQEHPAIYDSICFIMSSSTNVDLLVKVGEVVDKLFD-----LDEKLMLEWVRNGAAQPLDQPQEESEEQPVFRLVPCILEAAKQVRSENPEWLDVYMHILQLLTTVDDGIQAIVHCPDTGKDIWNLLFDLV-CHEFCQSDDPPIILQEQKTVLASVFSVLSAIYASQTE 339          
The following BLAST results are available for this feature:
BLAST of TCONS_00000663-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SAAL11.695e-3627.58Protein SAAL1 OS=Homo sapiens GN=SAAL1 PE=1 SV=2[more]
back to top