TCONS_00000586-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00000586-protein
Unique NameTCONS_00000586-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length306

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00000586-protein ID=TCONS_00000586-protein|Name=TCONS_00000586-protein|organism=Clytia hemisphaerica|type=polypeptide|length=306bp
AYTMEETYLVYLGWLCLMYIVYHIVSYTWFIVRTYYLTRIPYFRKNLKEY
GQWAVVTGCTDGIGKEYAKQLASKGLNVVLISRNVEKLNQLASEIKESSN
VETKIIQHDFCNIDDEKAYEIMASELNGLDIGILINNVGMAYGGPLKMLH
DLDHDRLSNIMKVNMFNVVRMTHMLQGGMVKRGRGAIVHISSGTVFLKSG
MANVYSSTKSFVLKMAETLRLECQGIVDHQVLTTMYVSSKMSKVRPAPTI
PTPQDYVASALRTLGVAPIACGYPSHEMIRLILLALPEKVCYWVFKIARS
RKEKMR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_000347XLOC_000347Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00000586TCONS_00000586Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002347SDR_fam
IPR016040NAD(P)-bd_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002347Short-chain dehydrogenase/reductase SDRPRINTSPR00081GDHRDHcoord: 179..195
score: 30.49
coord: 129..140
score: 35.83
coord: 53..70
score: 39.9
coord: 205..224
score: 24.87
IPR002347Short-chain dehydrogenase/reductase SDRPFAMPF00106adh_shortcoord: 53..242
e-value: 6.5E-35
score: 120.3
NoneNo IPR availableGENE3D3.40.50.720coord: 44..290
e-value: 1.7E-34
score: 118.7
NoneNo IPR availablePIRSFPIRSF00012611-beta-HSD1coord: 4..306
e-value: 1.6E-80
score: 268.2
NoneNo IPR availableCDDcd0535617beta-HSD1_like_SDR_ccoord: 51..288
e-value: 3.92729E-87
score: 262.54
IPR016040NAD(P)-binding domainSUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 49..264

Blast
[Close]
BLAST of TCONS_00000586-protein vs. Swiss-Prot (Human)
Match: DHB12 (Very-long-chain 3-oxoacyl-CoA reductase OS=Homo sapiens GN=HSD17B12 PE=1 SV=2)

HSP 1 Score: 181.03 bits (458), Expect = 4.550e-55
Identity = 103/249 (41.37%), Postives = 160/249 (64.26%), Query Frame = 0 
Query:   51 GQWAVVTGCTDGIGKEYAKQLASKGLNVVLISRNVEKLNQLASEIKESSNVETKIIQHDFCNIDDEKAYEIMASELNGLDIGILINNVGMAYGGPLKMLHDLDHDR-LSNIMKVNMFNVVRMTHMLQGGMVKRGRGAIVHISSGTVFLKSGMANVYSSTKSFVLKMAETLRLE--CQGIVDHQVLTTMYVSSKMSKVR-PAPTIPTPQDYVASALRTLGVAPIACGYPSHEMIRLILLALPEKVCYWVF 295
            G+WAVVTG TDGIGK YA++LA  G+ VVLISR+ +KL+Q++SEIKE   VET+ I  DF +   E  Y+ + + L GL+IGIL+NNVGM+Y  P   L   D D  +  ++ +N+ +V +MT ++  GMV+R +GAI++ISSG+  L   +  +YS+TK+FV   ++ L  E   +G+    VL   +V++K++K+R P    P+P+ +V SA++T+G+     GY  H ++  I+  LP     W++
Sbjct:   50 GEWAVVTGSTDGIGKSYAEELAKHGMKVVLISRSKDKLDQVSSEIKEKFKVETRTIAVDFAS---EDIYDKIKTGLAGLEIGILVNNVGMSYEYPEYFLDVPDLDNVIKKMININILSVCKMTQLVLPGMVERSKGAILNISSGSGMLPVPLLTIYSATKTFVDFFSQCLHEEYRSKGVFVQSVL-PYFVATKLAKIRKPTLDKPSPETFVKSAIKTVGLQSRTNGYLIHALMGSIISNLPS----WIY 290
The following BLAST results are available for this feature:
BLAST of TCONS_00000586-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DHB124.550e-5541.37Very-long-chain 3-oxoacyl-CoA reductase OS=Homo sa... [more]
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