Sequence
The following sequences are available for this feature:
polypeptide sequence
>TCONS_00000586-protein ID=TCONS_00000586-protein|Name=TCONS_00000586-protein|organism=Clytia hemisphaerica|type=polypeptide|length=306bp Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following
gene feature:
This polypeptide derives from the following
transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
InterPro
Analysis Name:
InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
50 100 150 200 250 300 Score = 39.9 Score = 35.83 Score = 30.49 Score = 24.87 Expect = 6.5E-35 / Score = 120.3 Expect = 1.7E-34 / Score = 118.7 Expect = 1.6E-80 / Score = 268.2 Expect = 3.92729E-87 / Score = 262.54 Score = Sequence PR00081 PF00106 G3DSA:3.40.50.720 PIRSF000126 cd05356 SSF51735
IPR Term IPR Description Source Source Term Source Description Alignment
IPR002347 Short-chain dehydrogenase/reductase SDR PRINTS PR00081 GDHRDH coord: 179..195 IPR002347 Short-chain dehydrogenase/reductase SDR PFAM PF00106 adh_short coord: 53..242 None No IPR available GENE3D 3.40.50.720 coord: 44..290 None No IPR available PIRSF PIRSF000126 11-beta-HSD1 coord: 4..306 None No IPR available CDD cd05356 17beta-HSD1_like_SDR_c coord: 51..288 IPR016040 NAD(P)-binding domain SUPERFAMILY 51735 NAD(P)-binding Rossmann-fold domains coord: 49..264
Blast
BLAST of TCONS_00000586-protein vs. Swiss-Prot (Human)
Match:
DHB12 (Very-long-chain 3-oxoacyl-CoA reductase OS=Homo sapiens GN=HSD17B12 PE=1 SV=2)
HSP 1 Score: 181.03 bits (458), Expect = 4.550e-55
Identity = 103/249 (41.37%), Postives = 160/249 (64.26%), Query Frame = 0
Query: 51 GQWAVVTGCTDGIGKEYAKQLASKGLNVVLISRNVEKLNQLASEIKESSNVETKIIQHDFCNIDDEKAYEIMASELNGLDIGILINNVGMAYGGPLKMLHDLDHDR-LSNIMKVNMFNVVRMTHMLQGGMVKRGRGAIVHISSGTVFLKSGMANVYSSTKSFVLKMAETLRLE--CQGIVDHQVLTTMYVSSKMSKVR-PAPTIPTPQDYVASALRTLGVAPIACGYPSHEMIRLILLALPEKVCYWVF 295
G+WAVVTG TDGIGK YA++LA G+ VVLISR+ +KL+Q++SEIKE VET+ I DF + E Y+ + + L GL+IGIL+NNVGM+Y P L D D + ++ +N+ +V +MT ++ GMV+R +GAI++ISSG+ L + +YS+TK+FV ++ L E +G+ VL +V++K++K+R P P+P+ +V SA++T+G+ GY H ++ I+ LP W++
Sbjct: 50 GEWAVVTGSTDGIGKSYAEELAKHGMKVVLISRSKDKLDQVSSEIKEKFKVETRTIAVDFAS---EDIYDKIKTGLAGLEIGILVNNVGMSYEYPEYFLDVPDLDNVIKKMININILSVCKMTQLVLPGMVERSKGAILNISSGSGMLPVPLLTIYSATKTFVDFFSQCLHEEYRSKGVFVQSVL-PYFVATKLAKIRKPTLDKPSPETFVKSAIKTVGLQSRTNGYLIHALMGSIISNLPS----WIY 290
The following BLAST results are available for this feature:
BLAST of TCONS_00000586-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (
Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens) )
Total hits: 1
A Y T M E E T Y L V Y L G W L C L M Y I V Y H I V S Y T W F I V R T Y Y L T R I P Y F R K N L K E Y G Q W A V V T G C T D G I G K E Y A K Q L A S K G L N V V L I S R N V E K L N Q L A S E I K E S S N V E T K I I Q H D F C N I D D E K A Y E I M A S E L N G L D I G I L I N N V G M A Y G G P L K M L H D L D H D R L S N I M K V N M F N V V R M T H M L Q G G M V K R G R G A I V H I S S G T V F L K S G M A N V Y S S T K S F V L K M A E T L R L E C Q G I V D H Q V L T T M Y V S S K M S K V R P A P T I P T P Q D Y V A S A L R T L G V A P I A C G Y P S H E M I R L I L L A L P E K V C Y W V F K I A R S R K E K M R 50 100 150 200 250 300 Expect = 4.55e-55 / Id = 41.37 Sequence DHB12
Match Name E-value Identity Description
DHB12 4.550e-55 41.37 Very-long-chain 3-oxoacyl-CoA reductase OS=Homo sa... [more]
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