TCONS_00000579-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00000579-protein
Unique NameTCONS_00000579-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length165

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00000579-protein ID=TCONS_00000579-protein|Name=TCONS_00000579-protein|organism=Clytia hemisphaerica|type=polypeptide|length=165bp
YGSWKSWDHCPSGSWVVSFQTKVESDQGGGSIHFTDDSALNAILMTCSDR
LFTKISSGQQVWGEWRGESNTCQNGFSRFTLKIEEEQGGNLFQDDSTTNA
IRMWCTENETWYKSGEGDWGEWTPTEYCPTGYRITGIKTQIESNQGGGDD
SALNGVQLICKYFGN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_000342XLOC_000342Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00000579TCONS_00000579Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005515VOMI
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005515Vitelline membrane outer layer protein I (VOMI)GENE3D2.100.10.20coord: 1..161
e-value: 5.6E-35
score: 120.5
IPR005515Vitelline membrane outer layer protein I (VOMI)PFAMPF03762VOMIcoord: 1..160
e-value: 6.0E-33
score: 114.2
IPR005515Vitelline membrane outer layer protein I (VOMI)SUPERFAMILY51092Vitelline membrane outer protein-I (VMO-I)coord: 1..160

Blast
BLAST of TCONS_00000579-protein vs. Swiss-Prot (Human)
Match: VMO1 (Vitelline membrane outer layer protein 1 homolog OS=Homo sapiens GN=VMO1 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.186e-16
Identity = 54/168 (32.14%), Postives = 82/168 (48.81%), Query Frame = 0
Query:    1 YGSWKSWDHCPSGSWVVSFQTKVESDQGGGSIHFTDDSALNAILMTCSDRLFTK----ISSGQQVWGEWRGESNTCQNG--FSRFTLKIEEEQGGNLFQDDSTTNAIRMWCTENETWYKSGE--GDWGEWTPTEYCPTGYRITGIKTQIESNQGGGDDSALNGVQLIC 160
            +G W   + CP G +   F  KVE  QG       DD+ALN I + C+          + S    WGEW  E   C+ G     F+L++E         D++  N +R  C++ E     G   GD+G+W+  ++CP G    G++T+I+  +G GDD+ALN  +L C
Sbjct:   44 WGDWAWPEMCPDGFFASGFSLKVEPPQG----IPGDDTALNGIRLHCARGNVLGNTHVVESQSGSWGEWS-EPLWCRGGAYLVAFSLRVEAP---TTLGDNTAANNVRFRCSDGEELQGPGLSWGDFGDWS--DHCPKG--ACGLQTKIQGPRGLGDDTALNDARLFC 199          
The following BLAST results are available for this feature:
BLAST of TCONS_00000579-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
VMO12.186e-1632.14Vitelline membrane outer layer protein 1 homolog O... [more]
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