Sequence
The following sequences are available for this feature:
polypeptide sequence
>TCONS_00000579-protein ID=TCONS_00000579-protein|Name=TCONS_00000579-protein|organism=Clytia hemisphaerica|type=polypeptide|length=165bp Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following
gene feature:
This polypeptide derives from the following
transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
Term Definition
IPR005515 VOMI
InterPro
Analysis Name:
InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
Y G S W K S W D H C P S G S W V V S F Q T K V E S D Q G G G S I H F T D D S A L N A I L M T C S D R L F T K I S S G Q Q V W G E W R G E S N T C Q N G F S R F T L K I E E E Q G G N L F Q D D S T T N A I R M W C T E N E T W Y K S G E G D W G E W T P T E Y C P T G Y R I T G I K T Q I E S N Q G G G D D S A L N G V Q L I C K Y F G N 20 40 60 80 100 120 140 160 Expect = 5.6E-35 / Score = 120.5 Expect = 6.0E-33 / Score = 114.2 Score = Sequence G3DSA:2.100.10.20 PF03762 SSF51092
IPR Term IPR Description Source Source Term Source Description Alignment
IPR005515 Vitelline membrane outer layer protein I (VOMI) GENE3D 2.100.10.20 coord: 1..161 IPR005515 Vitelline membrane outer layer protein I (VOMI) PFAM PF03762 VOMI coord: 1..160 IPR005515 Vitelline membrane outer layer protein I (VOMI) SUPERFAMILY 51092 Vitelline membrane outer protein-I (VMO-I) coord: 1..160
Blast
BLAST of TCONS_00000579-protein vs. Swiss-Prot (Human)
Match:
VMO1 (Vitelline membrane outer layer protein 1 homolog OS=Homo sapiens GN=VMO1 PE=1 SV=1)
HSP 1 Score: 72.7886 bits (177), Expect = 2.186e-16
Identity = 54/168 (32.14%), Postives = 82/168 (48.81%), Query Frame = 0
Query: 1 YGSWKSWDHCPSGSWVVSFQTKVESDQGGGSIHFTDDSALNAILMTCSDRLFTK----ISSGQQVWGEWRGESNTCQNG--FSRFTLKIEEEQGGNLFQDDSTTNAIRMWCTENETWYKSGE--GDWGEWTPTEYCPTGYRITGIKTQIESNQGGGDDSALNGVQLIC 160
+G W + CP G + F KVE QG DD+ALN I + C+ + S WGEW E C+ G F+L++E D++ N +R C++ E G GD+G+W+ ++CP G G++T+I+ +G GDD+ALN +L C
Sbjct: 44 WGDWAWPEMCPDGFFASGFSLKVEPPQG----IPGDDTALNGIRLHCARGNVLGNTHVVESQSGSWGEWS-EPLWCRGGAYLVAFSLRVEAP---TTLGDNTAANNVRFRCSDGEELQGPGLSWGDFGDWS--DHCPKG--ACGLQTKIQGPRGLGDDTALNDARLFC 199
The following BLAST results are available for this feature:
BLAST of TCONS_00000579-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (
Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens) )
Total hits: 1
Y G S W K S W D H C P S G S W V V S F Q T K V E S D Q G G G S I H F T D D S A L N A I L M T C S D R L F T K I S S G Q Q V W G E W R G E S N T C Q N G F S R F T L K I E E E Q G G N L F Q D D S T T N A I R M W C T E N E T W Y K S G E G D W G E W T P T E Y C P T G Y R I T G I K T Q I E S N Q G G G D D S A L N G V Q L I C K Y F G N 20 40 60 80 100 120 140 160 Expect = 2.19e-16 / Id = 32.14 Sequence VMO1
Match Name E-value Identity Description
VMO1 2.186e-16 32.14 Vitelline membrane outer layer protein 1 homolog O... [more]
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