TCONS_00000560-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00000560-protein
Unique NameTCONS_00000560-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length325

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00000560-protein ID=TCONS_00000560-protein|Name=TCONS_00000560-protein|organism=Clytia hemisphaerica|type=polypeptide|length=325bp
MIPSRIQTKIQIGCFALLICVFLSMLHFLCQREDTSAAINLLHLTKNKLF
SLKKKVDLIDRKSRTLSKDNTDVTLFLITPTYARYTQQADLVRLSYTLKH
VDNLHWIVVEDSEVQTKLVRKVLKDSQITYTQLNVKTRKDLQLGENDPRW
KKHRGVDQRNHALEWIRLNVGWNRRGVVYFADDDNTYHLDLFSEMRTTRK
VSIWPVALVGGLRWEGPICKNGKVVRFFTAWKVGQRAFPVDMAAFAVNLD
LLRDNHVLINPQVERGFLESDFLEQLKITRDDLEAKAEDCSKILVWHTQT
AKPKMKEEIKLVKRNGVGSDSKIII
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_000332XLOC_000332Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00000560TCONS_00000560Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005027Glyco_trans_43
IPR029044Nucleotide-diphossugar_trans
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0015018galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane
molecular_function GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 273..293
IPR005027Glycosyl transferase, family 43PFAMPF03360Glyco_transf_43coord: 94..300
e-value: 1.4E-69
score: 234.0
IPR005027Glycosyl transferase, family 43CDDcd00218GlcAT-Icoord: 74..302
e-value: 1.57239E-112
score: 327.716
IPR029044Nucleotide-diphospho-sugar transferasesGENE3D3.90.550.10coord: 73..317
e-value: 1.5E-86
score: 289.1
IPR029044Nucleotide-diphospho-sugar transferasesSUPERFAMILY53448Nucleotide-diphospho-sugar transferasescoord: 74..308

Blast
[Close]
BLAST of TCONS_00000560-protein vs. Swiss-Prot (Human)
Match: B3GA3 (Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 3 OS=Homo sapiens GN=B3GAT3 PE=1 SV=2)

HSP 1 Score: 250.751 bits (639), Expect = 1.135e-81
Identity = 134/263 (50.95%), Postives = 172/263 (65.40%), Query Frame = 0 
Query:   74 TLFLITPTYARYTQQADLVRLSYTLKHVDNLHWIVVEDSEVQTKLVRKVLKDSQITYTQLNVKTRKDLQLGENDPRWKKHRGVDQRNHALEWIRLNVGW----------NRRGVVYFADDDNTYHLDLFSEMRTTRKVSIWPVALVGGLRWEGPICKNGKVVRFFTAWKVGQRAFPVDMAAFAVNLDLLRDN-HVLINPQVERGFLESDFLEQLKITRDDLEAKAEDCSKILVWHTQTAKPKMKEEIKLVKRNGVGSDSKIII 325
            T++++TPTYAR  Q+A+LVRLS TL  V  LHW++VED+E  T LV  +L  S + +T L V T K  +L E +P W   RGV+QRN AL+W+R   G             +GVVYFADDDNTY  +LF EMR TR VS+WPV LVGGLR+EGP  ++G+VV F TAW+   R FPVDMA FAV L LL D  +   +    RG LES  L  L +   DLE +A +C+++LVWHT+T KPKMK+E +L +R G GSD  I +
Sbjct:   76 TIYVVTPTYARLVQKAELVRLSQTLSLVPRLHWLLVEDAEGPTPLVSGLLAASGLLFTHLVVLTPKAQRLREGEPGWVHPRGVEQRNKALDWLRGRGGAVGGEKDPPPPGTQGVVYFADDDNTYSRELFEEMRWTRGVSVWPVGLVGGLRFEGPQVQDGRVVGFHTAWEP-SRPFPVDMAGFAVALPLLLDKPNAQFDSTAPRGHLESSLLSHL-VDPKDLEPRAANCTRVLVWHTRTEKPKMKQEEQL-QRQGRGSDPAIEV 335
The following BLAST results are available for this feature:
BLAST of TCONS_00000560-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
B3GA31.135e-8150.95Galactosylgalactosylxylosylprotein 3-beta-glucuron... [more]
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