TCONS_00000542-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00000542-protein
Unique NameTCONS_00000542-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length317

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00000542-protein ID=TCONS_00000542-protein|Name=TCONS_00000542-protein|organism=Clytia hemisphaerica|type=polypeptide|length=317bp
MKTIIALLAFTTFAAAQVCEDKQWYCPMYARMGYCKAEPQQMKLVCPKSC
KMCGGDEKPDGSGSKPDQCGMPVAESRIIGGEVAKKDAWPWQISLYYNGQ
FMCGGSILSPRWVLTAAHCVDGFDYRGYQIVLGDYNRKTVDGDEQVYRAV
RAFHHPNWMRPSELNNDMALIELDKPAVFNDHVQPICLPEAGEELAAGSE
CYITGWGQHDVGQSGPPAMVLKQALLKTVSQQTCYNKNTRNLGIHVTDHM
ICAGRGPRDPTSGCHGDSGGPFVCKSNGRWVLYGSVSWGSGYCKSSEAYT
VFAKISSQVKWIESYAY
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_000327XLOC_000327Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00000542TCONS_00000542Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001314Peptidase_S1A
IPR001254Trypsin_dom
IPR003582ShKT_dom
IPR018114TRYPSIN_HIS
IPR033116TRYPSIN_SER
IPR009003Peptidase_S1_PA
Vocabulary: Molecular Function
TermDefinition
GO:0004252serine-type endopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
molecular_function GO:0004252 serine-type endopeptidase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001314Peptidase S1A, chymotrypsin familyPRINTSPR00722CHYMOTRYPSINcoord: 104..119
score: 61.39
coord: 261..273
score: 57.06
coord: 163..177
score: 36.01
IPR001254Serine proteases, trypsin domainSMARTSM00020trypsin_2coord: 77..312
e-value: 4.0E-81
score: 285.5
IPR001254Serine proteases, trypsin domainPFAMPF00089Trypsincoord: 78..312
e-value: 1.6E-64
score: 217.6
IPR001254Serine proteases, trypsin domainPROSITEPS50240TRYPSIN_DOMcoord: 78..317
score: 35.232
IPR001254Serine proteases, trypsin domainCDDcd00190Tryp_SPccoord: 78..314
e-value: 3.73191E-93
score: 278.006
IPR003582ShKT domainSMARTSM00254ShkT_1coord: 18..54
e-value: 6.7E-4
score: 29.0
IPR003582ShKT domainPFAMPF01549ShKcoord: 19..53
e-value: 3.0E-6
score: 27.6
IPR003582ShKT domainPROSITEPS51670SHKTcoord: 19..53
score: 9.927
NoneNo IPR availableGENE3D2.40.10.10coord: 109..183
e-value: 4.0E-30
score: 103.3
NoneNo IPR availableGENE3D2.40.10.10coord: 78..108
e-value: 4.1E-21
score: 74.4
NoneNo IPR availableGENE3D2.40.10.10coord: 184..316
e-value: 2.0E-39
score: 134.4
IPR018114Serine proteases, trypsin family, histidine active sitePROSITEPS00134TRYPSIN_HIScoord: 114..119
IPR033116Serine proteases, trypsin family, serine active sitePROSITEPS00135TRYPSIN_SERcoord: 262..273
IPR009003Peptidase S1, PA clanSUPERFAMILY50494Trypsin-like serine proteasescoord: 66..315

Blast
[Close]
BLAST of TCONS_00000542-protein vs. Swiss-Prot (Human)
Match: TRYG1 (Tryptase gamma OS=Homo sapiens GN=TPSG1 PE=2 SV=3)

HSP 1 Score: 165.622 bits (418), Expect = 6.784e-49
Identity = 95/251 (37.85%), Postives = 129/251 (51.39%), Query Frame = 0 
Query:   69 CGMPV---AESRIIGGEVAKKDAWPWQISLYYNGQFMCGGSILSPRWVLTAAHCVDG-FDYRGYQIVLGDYNRKTVDGDEQVYRAVRAFHHPNWMRPSELNNDMALIELDKPAVFNDHVQPICLPEAGEELAAGSECYITGWGQHDVGQSGPPAMVLKQALLKTVSQQTCYNKNTRNLGIHVTDHMICAGRGPRDPTSGCHGDSGGPFVCKSNGRWVLYGSVSWGSGYCKSSEAYTVFAKISSQVKWIESY 315
            CG P    A  RI+GG  A   AWPWQ SL      +CGGS+LSP+WVLTAAHC  G  +   YQ+ LG+    T+       R +     P+       + D+AL+EL  P   +  + P+CLPEA ++   G  C++TGWG    G+  PP   L++  +  V  +TC        G  +   M+CA RGP D    C  DSGGP VC+ NG WV  G+VSWG G C       V+ ++ + V WI  +
Sbjct:   26 CGRPQVSDAGGRIVGGHAAPAGAWPWQASLRLRRMHVCGGSLLSPQWVLTAAHCFSGSLNSSDYQVHLGELE-ITLSPHFSTVRQIILHSSPSGQ--PGTSGDIALVELSVPVTLSSRILPVCLPEASDDFCPGIRCWVTGWGYTREGEPLPPPYSLREVKVSVVDTETCRRDYPGPGGSILQPDMLCA-RGPGD---ACQDDSGGPLVCQVNGAWVQAGTVSWGEG-CGRPNRPGVYTRVPAYVNWIRRH 268
The following BLAST results are available for this feature:
BLAST of TCONS_00000542-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TRYG16.784e-4937.85Tryptase gamma OS=Homo sapiens GN=TPSG1 PE=2 SV=3[more]
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