Dll1 distalless homeodomain protein (polypeptide) - C. hemisphaerica

Overview
NameDll1 distalless homeodomain protein
Unique NameTCONS_00000458-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length352

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00000458-protein ID=TCONS_00000458-protein|Name=Dll1 distalless homeodomain protein|organism=Clytia hemisphaerica|type=polypeptide|length=352bp
MIEMKMSPHQQAVLSQQVPNMSSFLPPSKAPEAYRPLNYTPTSFVTNFKE
MSQQIDSNNNNNNNNNPHESEGKFSPRPATQFSPMGDLRSHPSTQDTHPF
KTFDDSKSFLNNNTPNGSMPEQDSISSSLQSFHSSGLPTSYTSSYNNNSM
QTTLSSPSSITSNMSRSFSSSSYVKQESDEEDEGDLTQSKNGKGGKLPRK
PRTIFTSQQLRELNRAFERTHYLSLPERAELAHALGLTQTQIKIWFQNKR
SKFKKIIKANGGQMPPPSSLVSGGNPGLWPSGYGEKSFGGPPMPHLSPFS
PPPSSHSSVPGDSWYYRMQSAGGYGSHETMFPYGGTSGTDVRTTRPNFSY
HM
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_000289XLOC_000289Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00000458TCONS_00000458Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020479Homeobox_metazoa
IPR000047HTH_motif
IPR001356Homeobox_dom
IPR017970Homeobox_CS
IPR009057Homeobox-like
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0043565sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
molecular_function GO:0003677 DNA binding
molecular_function GO:0043565 sequence-specific DNA binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020479Homeobox domain, metazoaPRINTSPR00024HOMEOBOXcoord: 235..245
score: 60.52
coord: 245..254
score: 68.71
coord: 220..231
score: 43.98
IPR000047Helix-turn-helix motifPRINTSPR00031HTHREPRESSRcoord: 227..236
score: 57.48
coord: 236..252
score: 63.85
IPR001356Homeobox domainSMARTSM00389HOX_1coord: 198..260
e-value: 3.9E-26
score: 102.8
IPR001356Homeobox domainPFAMPF00046Homeoboxcoord: 199..255
e-value: 8.7E-22
score: 76.6
IPR001356Homeobox domainPROSITEPS50071HOMEOBOX_2coord: 196..256
score: 20.083
NoneNo IPR availableGENE3D1.10.10.60coord: 169..255
e-value: 3.5E-26
score: 90.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 54..204
NoneNo IPR availableCDDcd00086homeodomaincoord: 199..255
e-value: 2.77948E-23
score: 89.9952
IPR017970Homeobox, conserved sitePROSITEPS00027HOMEOBOX_1coord: 231..254
IPR009057Homeobox domain-likeSUPERFAMILY46689Homeodomain-likecoord: 197..261

Blast
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BLAST of Dll1 distalless homeodomain protein vs. Swiss-Prot (Human)
Match: DLX1 (Homeobox protein DLX-1 OS=Homo sapiens GN=DLX1 PE=1 SV=3)

HSP 1 Score: 112.079 bits (279), Expect = 6.938e-29
Identity = 51/74 (68.92%), Postives = 63/74 (85.14%), Query Frame = 0 
Query:  191 NGKGGKLPRKPRTIFTSQQLRELNRAFERTHYLSLPERAELAHALGLTQTQIKIWFQNKRSKFKKIIKANGGQM 264
            NGKG K+ RKPRTI++S QL+ LNR F++T YL+LPERAELA +LGLTQTQ+KIWFQNKRSKFKK++K  G  +
Sbjct:  122 NGKGKKI-RKPRTIYSSLQLQALNRRFQQTQYLALPERAELAASLGLTQTQVKIWFQNKRSKFKKLMKQGGAAL 194
The following BLAST results are available for this feature:
BLAST of Dll1 distalless homeodomain protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DLX16.938e-2968.92Homeobox protein DLX-1 OS=Homo sapiens GN=DLX1 PE=... [more]
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