TCONS_00000451-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00000451-protein
Unique Name	TCONS_00000451-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	301

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00000451-protein ID=TCONS_00000451-protein|Name=TCONS_00000451-protein|organism=Clytia hemisphaerica|type=polypeptide|length=301bp
NPEKLAQTSEIRGESEKLEDTRELMKAKEKEQAVKKNSTKKVSNTRHSRF
GGSFWVSNMKGIGHKNTLVHHQHVSDANDISFDHKKYRAKVPVRKREAKD
NIVERRSTLTIRLLLKEFCKKFLEDCYNPLMRQVKENITSKRSQENDETF
YMWALRFFMAFNRVHSFKVEYVSETLNMNIFYQTLKQINHYYDNFFMHKR
GGWEPWQRRLHYGIQAYKELLTYIAHMDTSHDTILKDASSIIKNNVFYHE
EYRSIFLVLIRHYDAHKQSKKYLADLIDTFHVFLKMLERFCSNKGAIIIK
V

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_000287	XLOC_000287	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00000451	TCONS_00000451	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR006906	Timeless

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 11..31
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..44
IPR006906	Timeless protein	PFAM	PF04821	TIMELESS	coord: 1..56 e-value: 1.8E-7 score: 30.7

Blast

[Close]

BLAST of TCONS_00000451-protein vs. Swiss-Prot (Human)
Match: TIM (Protein timeless homolog OS=Homo sapiens GN=TIMELESS PE=1 SV=2)

HSP 1 Score: 256.529 bits (654), Expect = 9.369e-78
Identity = 128/300 (42.67%), Postives = 196/300 (65.33%), Query Frame = 0

Query:    1 NPEKLAQTSEIRGESEKLEDTRELMKAKEKEQAVKKNSTKKVSNTRHSRFGGSFWVSNMKGIGHKNTLVHHQHVSDANDISFDHKKYRAKVPVRKREAKDNIVERRSTLTIRLLLKEFCKKFLEDCYNPLMRQVKENITSKRSQENDETFYMWALRFFMAFNRVHSFKVEYVSETLNMNIFYQTLKQINHYYDNFFMHKRGGWEPWQRRLHYGIQAYKELLTYIAHMDTSHDTILKDASSIIKNNVFYHEEYRSIFLVLIRHYDAHKQSKKYLADLIDTFHVFLKMLERFCSNKGAIIIK 300
            NPE+LA   + R   E+  D  EL   +++E A KK    +  N RHSRFGGS+ V  +K IG ++ L+ H+ + +  + S D  K   KVP R++ A++  ++RRS L +RL L++FC +FLE+CYN LM  VK+++  +++Q++DET+YMWAL FFMAFNR  SF+   VSETL++  F+   + + +YY+   +  R     W RR+H  ++AY+ELL  +  MD S D  ++++S IIKNN+FY  EYR +FL L R +D   Q + +L DL++T H+FLKMLERFC ++G ++++
Sbjct:  230 NPEQLAGVGQGRLAQERSADFAELEVLRQREMAEKKTRALQRGN-RHSRFGGSYIVQGLKSIGERD-LIFHKGLHNLRNYSSDLGKQPKKVPKRRQAARELSIQRRSALNVRLFLRDFCSEFLENCYNRLMGSVKDHLLREKAQQHDETYYMWALAFFMAFNRAASFRPGLVSETLSVRTFHFIEQNLTNYYE-MMLTDRKEAASWARRMHLALKAYQELLATVNEMDISPDEAVRESSRIIKNNIFYVMEYRELFLALFRKFDERCQPRSFLRDLVETTHLFLKMLERFCRSRGNLVVQ 526

The following BLAST results are available for this feature:

BLAST of TCONS_00000451-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00000451-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
TIM	9.369e-78	42.67	Protein timeless homolog OS=Homo sapiens GN=TIMELE...	[more]

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TCONS_00000451-protein (polypeptide) - C. hemisphaerica