TCONS_00000402-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00000402-protein
Unique NameTCONS_00000402-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length638

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00000402-protein ID=TCONS_00000402-protein|Name=TCONS_00000402-protein|organism=Clytia hemisphaerica|type=polypeptide|length=638bp
MYQQGSSGYYGDGGGQYHDEGNQNQYGHNYRDYRMNDQSIKGKIEQKYWK
TKQKAIEKLGKDQDEFVIAGDAEVDARLEAFQHIKITCMQLMAAIECYQN
KIFALSQDENEMGRFLKDQGSLDKTKAGKMMIAVGKAQSFAAQQRLGMRS
SLARLYSEIETFRFRAIQDTQLTVTKMETSRSEYRARLLWMADISKELDP
DQFKRLDKFRDVQMQVKLAKKKFDQLKGDVIQKIDLLSASRCNLLSATLE
PYQSSMVKFLNTTAKSYNTVHEEYKGHPSYKFNILKNIIPNNGIVDDEED
DLANDQDNKSSNKENRRKKKTAKPEQAEEATEEKTSNDDDGDDKLINFDS
SPSEDVDQGVVPKPTERDADLLGASLDQDSSPGFGDYTETKDNNEGFEDL
LGKFEENNVLADKPSHQPSLISTSTEDTSDPFSFISNLDSDRRKSDTTPP
TKDSLPEPSVDDLLFGSPNRKLDGTEKTDLDILTDVLSNQNLGITETEHN
KSFSDQWQSMFGAGVSEESTPSMSDLLAQDLENSKSDSTPKQPENMVDAN
IKSDRMYMPSFLLEQMRKTDPQALKNGPPKGALAVKDSAKASSGKPGKSG
EKGKDMSAWFNLFADLDPLANPDDIGDSKDGQSEKQAC
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_000270XLOC_000270Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00000402TCONS_00000402Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010504AH_dom
IPR006723Islet_autoAg_Ica1_C
IPR027267AH/BAR-dom
Vocabulary: Molecular Function
TermDefinition
GO:0019904protein domain specific binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0019904 protein domain specific binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010504Arfaptin homology (AH) domainSMARTSM01015Arfaptin_2coord: 40..267
e-value: 6.0E-85
score: 298.2
IPR010504Arfaptin homology (AH) domainPFAMPF06456Arfaptincoord: 42..265
e-value: 5.0E-67
score: 225.7
IPR010504Arfaptin homology (AH) domainPROSITEPS50870AHcoord: 69..272
score: 42.209
IPR006723Islet cell autoantigen Ica1, C-terminalSMARTSM01237ICA69_2coord: 279..638
e-value: 4.1E-7
score: 23.1
IPR006723Islet cell autoantigen Ica1, C-terminalPFAMPF04629ICA69coord: 406..630
e-value: 1.6E-21
score: 77.7
NoneNo IPR availableGENE3D1.20.1270.60coord: 50..279
e-value: 1.2E-12
score: 47.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 619..638
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..30
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 512..553
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 297..478
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 565..606
IPR027267Arfaptin homology (AH) domain/BAR domainSUPERFAMILY103657BAR/IMD domain-likecoord: 67..266

Blast
[Close]
BLAST of TCONS_00000402-protein vs. Swiss-Prot (Human)
Match: ICA69 (Islet cell autoantigen 1 OS=Homo sapiens GN=ICA1 PE=1 SV=2)

HSP 1 Score: 304.294 bits (778), Expect = 2.182e-96
Identity = 141/268 (52.61%), Postives = 193/268 (72.01%), Query Frame = 0 
Query:   21 GNQNQYGHNYRDYRMNDQSIKGKIEQKYWKTKQKAIEKLGKDQDEFVIAGDAEVDARLEAFQHIKITCMQLMAAIECYQNKIFALSQDENEMGRFLKDQGSLDKTKAGKMMIAVGKAQSFAAQQRLGMRSSLARLYSEIETFRFRAIQDTQLTVTKMETSRSEYRARLLWMADISKELDPDQFKRLDKFRDVQMQVKLAKKKFDQLKGDVIQKIDLLSASRCNLLSATLEPYQSSMVKFLNTTAKSYNTVHEEYKGHPSYKFNILKNI 288
            G++  Y  + +D    D+S+  K++QKYW+TKQ  I+  GK +DE V+A DA++DA+LE F  I+ TC+ L  AI  YQ +I  LSQ+ENE+G+FL+ QG  DKT+AGKMM A GKA  F++QQRL +R+ L R + E+ETFR RAI DT LTV +ME  R+EYR  LLWM D+S+ELDPD +K+++KFR VQ QV+LAKK FD+LK DV QK+DLL ASRCNLLS  L  YQ++++ F   T+ +   +HE +KG+  Y+F  LK++
Sbjct:    3 GHKCSYPWDLQDRYAQDKSVVNKMQQKYWETKQAFIKATGKKEDEHVVASDADLDAKLELFHSIQRTCLDLSKAIVLYQKRICFLSQEENELGKFLRSQGFQDKTRAGKMMQATGKALCFSSQQRLALRNPLCRFHQEVETFRHRAISDTWLTVNRMEQCRTEYRGALLWMKDVSQELDPDLYKQMEKFRKVQTQVRLAKKNFDKLKMDVCQKVDLLGASRCNLLSHMLATYQTTLLHFWEKTSHTMAAIHESFKGYQPYEFTTLKSL 270
The following BLAST results are available for this feature:
BLAST of TCONS_00000402-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ICA692.182e-9652.61Islet cell autoantigen 1 OS=Homo sapiens GN=ICA1 P... [more]
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