Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00000376-protein ID=TCONS_00000376-protein|Name=TCONS_00000376-protein|organism=Clytia hemisphaerica|type=polypeptide|length=423bp
MDTLQYCRCCRIFVSLDRYLIRGGICDRCSLRYTSIYYNNAYSSRFSMND
VIYIKIWSLNTERLTMIWDFAIHQSSYIKDVKQLVSKITGISFENNRLYH
LRENPHIGQEIRPSKHCHSIWHPLNDFETIEYHYSITKGPKELNYYRRTN
YDDIKVDKVDKYMVVENKTKISIMCNKNFEEPKEICSFEIDRSSSIKDIK
EMVAKIIDXSKDWERIYLTSLSGGDHDSQKICDSYNINCISTFRLNFLTK
TVELKFQNFRLIRDVKIHIQKEFNIRVGDQVLIYKGKKLMENQRTRDVFL
ENQMNSLRDVSISLVIEKKPFMLRIEPQIRSMSWFSISINDSDNIEEVKQ
QIQAKTDIPIQNIHLIDQKTQDILCDTKKVEDYKFLDYSNITLQRKLVIR
LHFAKDNRIEERFEILPGYEXSH Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005515 |
protein binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR000626 | Ubiquitin domain | SMART | SM00213 | ubq_7 | coord: 325..396
e-value: 1.7
score: 12.3
coord: 241..317
e-value: 1.6
score: 12.8 |
| IPR000626 | Ubiquitin domain | PFAM | PF00240 | ubiquitin | coord: 335..393
e-value: 7.6E-5
score: 22.3
coord: 249..295
e-value: 7.1E-6
score: 25.6 |
| IPR000626 | Ubiquitin domain | PROSITE | PS50053 | UBIQUITIN_2 | coord: 243..303
score: 9.09 |
| None | No IPR available | GENE3D | 3.10.20.90 | | coord: 161..240
e-value: 0.21
score: 11.1 |
| None | No IPR available | GENE3D | 3.10.20.90 | | coord: 323..397
e-value: 4.8E-9
score: 35.6 |
| None | No IPR available | GENE3D | 3.10.20.90 | | coord: 241..318
e-value: 4.7E-8
score: 32.4 |
| None | No IPR available | GENE3D | 3.10.20.90 | | coord: 46..141
e-value: 0.018
score: 14.3 |
| None | No IPR available | CDD | cd01769 | UBL | coord: 249..289
e-value: 2.86978E-4
score: 37.6318 |
| None | No IPR available | CDD | cd01769 | UBL | coord: 335..393
e-value: 6.89225E-5
score: 39.5578 |
| IPR029071 | Ubiquitin-related domain | SUPERFAMILY | 54236 | Ubiquitin-like | coord: 324..398 |
| IPR029071 | Ubiquitin-related domain | SUPERFAMILY | 54236 | Ubiquitin-like | coord: 249..297 |
Blast
The following BLAST results are available for this feature:
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