Sequence
The following sequences are available for this feature:
polypeptide sequence
>TCONS_00000374-protein ID=TCONS_00000374-protein|Name=TCONS_00000374-protein|organism=Clytia hemisphaerica|type=polypeptide|length=639bp Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following
gene feature:
This polypeptide derives from the following
transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Biological Process
Term Definition
GO:0007186 G-protein coupled receptor signaling pathway
Vocabulary: Molecular Function
Term Definition
GO:0004930 G-protein coupled receptor activity
Vocabulary: Cellular Component
Term Definition
GO:0016021 integral component of membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category
Term Accession
Term Name
biological_process
GO:0007186 G-protein coupled receptor signaling pathway
cellular_component
GO:0016021 integral component of membrane
molecular_function
GO:0004930 G-protein coupled receptor activity
InterPro
Analysis Name:
InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
50 100 150 200 250 300 350 400 450 500 550 600 Score = 23.93 Score = 21.71 Score = 27.41 Score = 24.5 Score = 19.66 Score = 26.36 Expect = 1.4E-37 / Score = 129.3 Score = Expect = 3.7E-57 / Score = 193.1 Score = Score = Score = 30.883 Sequence PR00237 PF00001 PS00237 G3DSA:1.20.1070.10 SSF81321 PS50262
IPR Term IPR Description Source Source Term Source Description Alignment
IPR000276 G protein-coupled receptor, rhodopsin-like PRINTS PR00237 GPCRRHODOPSN coord: 96..118 IPR000276 G protein-coupled receptor, rhodopsin-like PFAM PF00001 7tm_1 coord: 32..360 IPR000276 G protein-coupled receptor, rhodopsin-like PROSITE PS00237 G_PROTEIN_RECEP_F1_1 coord: 102..118 None No IPR available GENE3D 1.20.1070.10 coord: 5..392 None No IPR available SUPERFAMILY 81321 Family A G protein-coupled receptor-like coord: 22..211 IPR017452 GPCR, rhodopsin-like, 7TM PROSITE PS50262 G_PROTEIN_RECEP_F1_2 coord: 32..360
Blast
BLAST of TCONS_00000374-protein vs. Swiss-Prot (Human)
Match:
OX2R (Orexin receptor type 2 OS=Homo sapiens GN=HCRTR2 PE=1 SV=2)
HSP 1 Score: 87.8113 bits (216), Expect = 2.715e-18
Identity = 58/183 (31.69%), Postives = 94/183 (51.37%), Query Frame = 0
Query: 23 IIICIVGFLGNLVVISAIIFDKRLQTSLNYLVLNLSFCNICVVVFSIPFQLLTKRHHHDFIFGELGCQLIYPFATWAVNVSVSSLLTITIERWIAIVHPMTWRSCQKHTLKMIFANHVYGYVTIIPYAVHIRLA-VIPG-----TELRYCAEIWDTGT-AKFYTILLFLLQYLLPLALMMFFY 198
II+ +V +GN++V A+ + ++T NY ++NLS ++ V + +P L+ F FG+ C++I T +V+VSV +L I ++RW AI HP+ ++S K I + + +IP A+ + + V PG T C E W K Y I FL+ Y+ PL LM+ Y
Sbjct: 62 IIVFVVALIGNVLVCVAVWKNHHMRTVTNYFIVNLSLADVLVTITCLPATLVVDITETWF-FGQSLCKVIPYLQTVSVSVSVLTLSCIALDRWYAICHPLMFKSTAKRARNSIVIIWIVSCIIMIPQAIVMECSTVFPGLANKTTLFTVCDERWGGEIYPKMYHICFFLVTYMAPLCLMVLAY 243
The following BLAST results are available for this feature:
