TCONS_00000374-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00000374-protein
Unique NameTCONS_00000374-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length639

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00000374-protein ID=TCONS_00000374-protein|Name=TCONS_00000374-protein|organism=Clytia hemisphaerica|type=polypeptide|length=639bp
MSNNTTIKPTDLLPVEAKDIPQIIICIVGFLGNLVVISAIIFDKRLQTSL
NYLVLNLSFCNICVVVFSIPFQLLTKRHHHDFIFGELGCQLIYPFATWAV
NVSVSSLLTITIERWIAIVHPMTWRSCQKHTLKMIFANHVYGYVTIIPYA
VHIRLAVIPGTELRYCAEIWDTGTAKFYTILLFLLQYLLPLALMMFFYTS
AWIHLKRQNDHTIRLSEEARTARSMSLRLNNEEEIRARFAKRGRTESILS
TTYSGEAKDMCLMFCLKMFRVSNYYKRTSSSASSSYDNADYFIANGRRRQ
TIRTFFMFLLIIVIFAISSLPNQIIWLVYSFKQGAKFSESVTSTFVIFHY
LNYIMNPFIYGGLNKYFLRAYKRLFLCSHSEENNNTSTTLAPPCSPGLTG
HPDLFREGIITRNPVNVISAGSLDSIYEEAEEEDEWSVATDKDQTPVSSP
PMSTKRVKFKFSVTSNPFRKLSTISNMSDQEKKERRHRKISQALVQDRQR
KLTLPALAASTSINHEDKARIRKHSVPAQIQNPKAFIFDDSFSVLPPTRV
NSSSLKDKLNLLTSRVSPRSSVTEILNNNTLPTKAVTSRRRKTGIFNMTD
SGSFETHNNGQKSCFDQISEESEVSSHSERSSLLXFRRI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_000248XLOC_000248Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00000374TCONS_00000374Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000276GPCR_Rhodpsn
IPR017452GPCR_Rhodpsn_7TM
Vocabulary: Biological Process
TermDefinition
GO:0007186G-protein coupled receptor signaling pathway
Vocabulary: Molecular Function
TermDefinition
GO:0004930G-protein coupled receptor activity
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007186 G-protein coupled receptor signaling pathway
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0004930 G-protein coupled receptor activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000276G protein-coupled receptor, rhodopsin-likePRINTSPR00237GPCRRHODOPSNcoord: 96..118
score: 27.41
coord: 17..41
score: 23.93
coord: 304..328
score: 19.66
coord: 50..71
score: 21.71
coord: 179..202
score: 24.5
coord: 342..368
score: 26.36
IPR000276G protein-coupled receptor, rhodopsin-likePFAMPF000017tm_1coord: 32..360
e-value: 1.4E-37
score: 129.3
IPR000276G protein-coupled receptor, rhodopsin-likePROSITEPS00237G_PROTEIN_RECEP_F1_1coord: 102..118
NoneNo IPR availableGENE3D1.20.1070.10coord: 5..392
e-value: 3.7E-57
score: 193.1
NoneNo IPR availableSUPERFAMILY81321Family A G protein-coupled receptor-likecoord: 22..211
coord: 290..392
IPR017452GPCR, rhodopsin-like, 7TMPROSITEPS50262G_PROTEIN_RECEP_F1_2coord: 32..360
score: 30.883

Blast
[Close]
BLAST of TCONS_00000374-protein vs. Swiss-Prot (Human)
Match: OX2R (Orexin receptor type 2 OS=Homo sapiens GN=HCRTR2 PE=1 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 2.715e-18
Identity = 58/183 (31.69%), Postives = 94/183 (51.37%), Query Frame = 0 
Query:   23 IIICIVGFLGNLVVISAIIFDKRLQTSLNYLVLNLSFCNICVVVFSIPFQLLTKRHHHDFIFGELGCQLIYPFATWAVNVSVSSLLTITIERWIAIVHPMTWRSCQKHTLKMIFANHVYGYVTIIPYAVHIRLA-VIPG-----TELRYCAEIWDTGT-AKFYTILLFLLQYLLPLALMMFFY 198
            II+ +V  +GN++V  A+  +  ++T  NY ++NLS  ++ V +  +P  L+       F FG+  C++I    T +V+VSV +L  I ++RW AI HP+ ++S  K     I    +   + +IP A+ +  + V PG     T    C E W      K Y I  FL+ Y+ PL LM+  Y
Sbjct:   62 IIVFVVALIGNVLVCVAVWKNHHMRTVTNYFIVNLSLADVLVTITCLPATLVVDITETWF-FGQSLCKVIPYLQTVSVSVSVLTLSCIALDRWYAICHPLMFKSTAKRARNSIVIIWIVSCIIMIPQAIVMECSTVFPGLANKTTLFTVCDERWGGEIYPKMYHICFFLVTYMAPLCLMVLAY 243
The following BLAST results are available for this feature:
BLAST of TCONS_00000374-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
OX2R2.715e-1831.69Orexin receptor type 2 OS=Homo sapiens GN=HCRTR2 P... [more]
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