TCONS_00000181-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00000181-protein
Unique Name	TCONS_00000181-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	542

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00000181-protein ID=TCONS_00000181-protein|Name=TCONS_00000181-protein|organism=Clytia hemisphaerica|type=polypeptide|length=542bp
MWKSLALVLVVLCILEQGQCEVFTSMANMENLAETEQLLFSSFKTYLQAE
EDRLKVLKNFMLRVEDAQKNVNLSDVAKYLGNPINTYLMLRRLSSEWRDV
ESFLSQDGEAAEDFKAIYDNAKMVLPTTEDHEGAMTALFRLQDTYKVPSN
MLAKGIIPGVKSLSHHLEIREIYEIGLHAYDNQNYQYASEWMRTAYEEFG
LNATIDGIKRNKVLDYLAYSEYKKGNLPEAFKLTKELAALKPKDKRILGN
LEHYRYELRASQSTGKRGDPGTLTDEELYKNAKGGSQTEARSRRASLGDY
EKLCRGEVRQQTKRELKKMKCWYKTNDPTLILKPQKFERIWADPEIFMLR
DVITNRQIEQLKEEAYPILKRATIQDPITGQLRHADYRVSKSAWLSPSRH
EFVRQIALRAQSATNLDIRSSEQLQIANYGIGGHYEPHFDHAREDEDKFT
DLGMGNRIATVLYYLSDVEAGGATVFTVGKTAVFPSKGDAVFWYNLKRNG
IGNPRTRHAACPVLVGTKWVSNFWIHEYNQEFRRPCALKSHL

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_000107	XLOC_000107	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00000181	TCONS_00000181	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR006620	Pro_4_hyd_alph
IPR005123	Oxoglu/Fe-dep_dioxygenase
IPR011990	TPR-like_helical_dom
IPR013547	Pro_4_hyd_alph_N

Vocabulary: **Molecular Function**
Term	Definition
GO:0005506	iron ion binding
GO:0031418	L-ascorbic acid binding
GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0016491	oxidoreductase activity
GO:0005515	protein binding
GO:0004656	procollagen-proline 4-dioxygenase activity
GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen

Vocabulary: **Biological Process**
Term	Definition
GO:0055114	oxidation-reduction process

Vocabulary: **Cellular Component**
Term	Definition
GO:0005783	endoplasmic reticulum

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
cellular_component	GO:0005783	endoplasmic reticulum
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0031418	L-ascorbic acid binding
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
molecular_function	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
molecular_function	GO:0004656	procollagen-proline 4-dioxygenase activity
molecular_function	GO:0005515	protein binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006620	Prolyl 4-hydroxylase, alpha subunit	SMART	SM00702	p4hc	coord: 344..526 e-value: 1.1E-64 score: 230.8
IPR005123	Oxoglutarate/iron-dependent dioxygenase	PFAM	PF13640	2OG-FeII_Oxy_3	coord: 424..526 e-value: 1.0E-16 score: 61.5
IPR005123	Oxoglutarate/iron-dependent dioxygenase	PROSITE	PS51471	FE2OG_OXY	coord: 420..527 score: 12.933
IPR011990	Tetratricopeptide-like helical domain	GENE3D	1.25.40.10		coord: 128..259 e-value: 5.6E-10 score: 38.7
IPR011990	Tetratricopeptide-like helical domain	SUPERFAMILY	48452	TPR-like	coord: 170..257
None	No IPR available	GENE3D	2.60.120.620		coord: 332..533 e-value: 8.0E-40 score: 136.3
IPR013547	Prolyl 4-hydroxylase alpha-subunit, N-terminal	PFAM	PF08336	P4Ha_N	coord: 25..158 e-value: 1.6E-32 score: 112.2

Blast

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BLAST of TCONS_00000181-protein vs. Swiss-Prot (Human)
Match: P4HA1 (Prolyl 4-hydroxylase subunit alpha-1 OS=Homo sapiens GN=P4HA1 PE=1 SV=2)

HSP 1 Score: 397.512 bits (1020), Expect = 4.218e-133
Identity = 225/536 (41.98%), Postives = 323/536 (60.26%), Query Frame = 0

Query:    8 VLVVLCILEQGQCE--VFTSMANMENLAETEQLLFSSFKTYLQAEEDRLKVLKNFMLRVEDAQKNVNLSDVAKYLGNPINTYLMLRRLSSEWRDVESFLSQDGEAAEDFKAIYDNAKMVLPTTEDHEGAMTALFRLQDTYKVPSNMLAKGIIPGVKSLSHHLEIREIYEIGLHAYDNQNYQYASEWMRTAYEEFGLNATIDGIKRNKVLDYLAYSEYKKGNLPEAFKLTKELAALKPKDKRILGNLEHYRYELRASQSTGKRGDPGTLTDEELYKNAKGGSQTEARSRRASLGDYEKLCRGEVRQQTKRELKKMKCWYK--TNDPTLILKPQKFERIWADPEIFMLRDVITNRQIEQLKEEAYPILKRATIQDPITGQLRHADYRVSKSAWLSPSRHEFVRQIALRAQSATNLDIRSSEQLQIANYGIGGHYEPHFDHAREDE-DKFTDLGMGNRIATVLYYLSDVEAGGATVFTVGKTAVFPSKGDAVFWYNLKRNGIGNPRTRHAACPVLVGTKWVSNFWIHEYNQEFRRPCAL 538
            +L++  +L Q       FTS+  M +L  TE+ L +S K Y++AEED+L+ +K +  ++ D   +    D   ++G+P+N + +++RL++EW ++E+ + +D   ++ F +     +   P  ED  GA  AL RLQDTY + ++ ++KG +PGVK  S  L   + +E+G  AY   +Y +   WM  A  +      I  I +  VLDYL+Y+ Y++G+L +A  LTK+L  L P+ +R  GNL+++ Y +   +   K       +D++     KG +      R+     YE LCRGE  + T R  KK+ C Y     +P  IL P K E  W  P I    D+I++ +IE +K+ A P L+RATI +PITG L    YR+SKSAWLS   +  V +I +R Q  T LD+ ++E+LQ+ANYG+GG YEPHFD AR+DE D F +LG GNRIAT L+Y+SDV AGGATVF     +V+P KG AVFWYNL  +G G+  TRHAACPVLVG KWVSN W+HE  QEFRRPC L
Sbjct:    5 ILIIGILLPQSLAHPGFFTSIGQMTDLIHTEKDLVTSLKDYIKAEEDKLEQIKKWAEKL-DRLTSTATKDPEGFVGHPVNAFKLMKRLNTEWSELENLVLKD--MSDGFISNLTIQRQYFPNDEDQVGAAKALLRLQDTYNLDTDTISKGNLPGVKHKSF-LTAEDCFELGKVAYTEADYYHTELWMEQALRQLD-EGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRANGNLKYFEYIMAKEKDVNKSASDDQ-SDQKTTPKKKGVAVDYLPERQK----YEMLCRGEGIKMTPRRQKKLFCRYHDGNRNPKFILAPAKQEDEWDKPRIIRFHDIISDAEIEIVKDLAKPRLRRATISNPITGDLETVHYRISKSAWLSGYENPVVSRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDAFKELGTGNRIATWLFYMSDVSAGGATVFPEVGASVWPKKGTAVFWYNLFASGEGDYSTRHAACPVLVGNKWVSNKWLHERGQEFRRPCTL 530

The following BLAST results are available for this feature:

BLAST of TCONS_00000181-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00000181-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1

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Match Name	E-value	Identity	Description
P4HA1	4.218e-133	41.98	Prolyl 4-hydroxylase subunit alpha-1 OS=Homo sapie...	[more]

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TCONS_00000181-protein (polypeptide) - C. hemisphaerica

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