TCONS_00000159-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00000159-protein
Unique NameTCONS_00000159-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length345

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00000159-protein ID=TCONS_00000159-protein|Name=TCONS_00000159-protein|organism=Clytia hemisphaerica|type=polypeptide|length=345bp
NKITMAFDVYVSYAEEDSQWIHENLVEELEESSNLSVCLRSRDFDSDLSL
IENRKLFVEKCSSCVLVFSKNYCKKASEWSYFTKLIKSKEDKSITGLLDN
KEDAEVLENLNVKSNEELETEENENQKEEEEEEEQEKTTNVSDYILFDNV
YPHLVSSSFCAEDEDLTRDDLEDLTLKMEDVKTMMLLQENNTPPADEQKI
GFQQPGITGKNKHFEKFESQKEQMEVLDALQTMMEKFQSRYDLFAVQNQN
NNNVMLILRKKRYRRILKNFEDCILQAVNGKKNSALIHSLPFVMDMLEGN
QDIHGFQCCCCGNLFHSQRALDIHLDFCVKQHWKDLMKFTPKYKY
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_000092XLOC_000092Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00000159TCONS_00000159Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000157TIR_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0007165signal transduction
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007165 signal transduction
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
ZOOM
x 1
POSITION
0
50100150200250300Score = Score = Expect = 1.0E-12 / Score = 47.9Score = 14.002Score = SequenceCoilmobidb-litePF01582G3DSA:3.40.50.10140PS50104SSF52200
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 104..140
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 112..139
IPR000157Toll/interleukin-1 receptor homology (TIR) domainPFAMPF01582TIRcoord: 6..80
e-value: 3.3E-6
score: 26.9
IPR000157Toll/interleukin-1 receptor homology (TIR) domainGENE3D3.40.50.10140coord: 4..144
e-value: 1.0E-12
score: 47.9
IPR000157Toll/interleukin-1 receptor homology (TIR) domainPROSITEPS50104TIRcoord: 5..79
score: 14.002
IPR000157Toll/interleukin-1 receptor homology (TIR) domainSUPERFAMILY52200Toll/Interleukin receptor TIR domaincoord: 6..82

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00000159-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
ZOOM
x 1
POSITION
0
50100150200250300Sequence
Match NameE-valueIdentityDescription
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