TCONS_00000146-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00000146-protein
Unique NameTCONS_00000146-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length573

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00000146-protein ID=TCONS_00000146-protein|Name=TCONS_00000146-protein|organism=Clytia hemisphaerica|type=polypeptide|length=573bp
ICFSELGLLLIAVEDRIGSEMVFVVNPSDDVIIRKETRAFLIAQDSKSVK
KARRYCGRCHRDIVNQKKKLPVCSCKKSSGEVYTSMRRESAFPSTYIQLM
EQKPRPSFSIDNMSRSTIYCSSAVDRFHASLKKLKYEIPKDHNLYDITGT
YFWCPERPFDEAIMSLEEAAKEDFMEHVVVAVIADEKSPPLGIRELIQPL
RASNQQPKDLKKIIILVADKSFLMKEWASISTFPGVFIVQGSPYRQVDLR
VVNVHLADLVIILSPPNIAQEALEGVEKPAMLDKEVIMVTMNLRAMTFEQ
YRLGDTPNIKRQKHEEALPSLMKNDATNLNRTRHERRSMSTNLEYRIRRK
NNEQIRMITELVYDSNTLYMEECEEDDEEFESEGIWMTKSYACGSVFTDS
VLDFLASATYFNPDILTLVRNLVTGSVTGSSDLDIILSQGRQPEGTEATE
EINQARKRCRVEQLALNDESFKIFGEVKRFGELFMRALSYHGTLCLGLYR
LHNQERRSKSLNKRYVINFPPPDFLLKKDDLVYVLLQFEEKGYNLQTLSE
EDDKYGGEEKINLEFDSNDQTQL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_000083XLOC_000083Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00000146TCONS_00000146Clytia hemisphaericatranscript
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.720coord: 168..377
e-value: 5.5E-15
score: 54.9

Blast
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BLAST of TCONS_00000146-protein vs. Swiss-Prot (Human)
Match: KCMA1 (Calcium-activated potassium channel subunit alpha-1 OS=Homo sapiens GN=KCNMA1 PE=1 SV=2)

HSP 1 Score: 278.87 bits (712), Expect = 6.254e-82
Identity = 187/593 (31.53%), Postives = 298/593 (50.25%), Query Frame = 0 
Query:    1 ICFSELGLLLIAVEDRIGS-EMVFVVNPSDDVIIRKETRAFLIAQDSKSVKKARRYCGRCHRDIVNQKKKLPVCSCKKSSGEVYTSMRRESAFPSTY----IQLMEQKPRPSFSIDNMSRSTIYCSSAVDRFHASLKKLKYEIPK----------------------------------------DHNL--YDITGTYFWCPERPFDEAIMSLEEAAKEDFMEHVVVAVIADEKSPPLGIRELIQPLRASNQQPKDLKKIIILVADKSFLMKEWASISTFPGVFIVQGSPYRQVDLRVVNVHLADLVIILSPPNIAQEALEGVEKPAMLDKEVIMVTMNLRAMTFEQYRLGDTPNIKRQKHEEALPSLMKNDATNLNRTRH---ERRSMSTNLEYRIRRKNNEQIRMITELVYDSNTLYMEECEEDDEEFESEGIWMTKSYACGSVFTDSVLDFLASATYFNPDILTLVRNLVTGSVTGSSDLDIILSQGRQPEGTEATEEINQARKRCRVEQLALNDESFKIFGEVKRFGELFMRALSYHGTLCLGLYRLHNQERRSKS-LNKRYVINFPPPDFLLKKDDLVYVLLQFEEKG 542
            +CF +L LL+IA+E +  + E   ++NP + + I++ T  F IA D+K VK+A  YC  CH DI +  K++  C CK+    +Y  MRR   F           M  + R +  +D + R+    S +V+    S +  + E P                                         D N+  YD TG + WC  +  ++ I++  EAA      HVVV +  D  S  +G+R L+ PLRASN    +LK I+  V    +L +EW ++  FP V I+ G+P  + DLR VN++L D+ +ILS           ++  ++ DKE I+ ++N+++M F+     D+  + +   +   P  M   + + N   H    + S++T +           I +ITELV D+N  ++++ ++DD + E   +++T+ +ACG+ F  SVLD L SATYFN +ILTL+R LVTG  T   +L+ ++++     G  +T +    R RCRV QLAL D  F   G+   +G+LF +AL  +  LC G+YRL +    + S   KRYVI  PP +F L   DL++ L+QF+   
Sbjct:  621 LCFVKLKLLMIAIEYKSANRESRILINPGNHLKIQEGTLGFFIASDAKEVKRAFFYCKACHDDITD-PKRIKKCGCKRPKMSIYKRMRRACCFDCGRSERDCSCMSGRVRGN--VDTLERAFPLSSVSVNDCSTSFRAFEDEQPSTLSPKKKQRNGGMRNSPNTSPKLMRHDPLLIPGNDQIDNMDSNVKKYDSTGMFHWCAPKEIEKVILTRSEAAMTVLSGHVVVCIFGDVSSALIGLRNLVMPLRASNFHYHELKHIV-FVGSIEYLKREWETLHNFPKVSILPGTPLSRADLRAVNINLCDMCVILSANQ------NNIDDTSLQDKECILASLNIKSMQFD-----DSIGVLQANSQGFTPPGMDRSSPD-NSPVHGMLRQPSITTGV----------NIPIITELVNDTNVQFLDQDDDDDPDTE---LYLTQPFACGTAFAVSVLDSLMSATYFNDNILTLIRTLVTGGAT--PELEALIAEENALRGGYSTPQTLANRDRCRVAQLALLDGPFADLGDGGCYGDLFCKALKTYNMLCFGIYRLRDAHLSTPSQCTKRYVITNPPYEFELVPTDLIFCLMQFDHNA 1182
The following BLAST results are available for this feature:
BLAST of TCONS_00000146-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
KCMA16.254e-8231.53Calcium-activated potassium channel subunit alpha-... [more]
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