TCONS_00000099-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00000099-protein
Unique Name	TCONS_00000099-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	765

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00000099-protein ID=TCONS_00000099-protein|Name=TCONS_00000099-protein|organism=Clytia hemisphaerica|type=polypeptide|length=765bp
MASQIKDLAMDEDIGPSVDSPLIEERIAARRLRITRRMEALKKDTLGEDV
TVKVSSEPTKELSKSRKQIEESFQQLAKLISDGTELVSNIEVACDSREAT
LRQEEDENVRQRTQKLQDEVKTAAIKFEQITKKWEGALKKDVPQQLKEML
ESQRELCDEMIGEKDNLIDELQQDLKQKDDQYVKDLRKQSEDADLMLERM
EEQIKTLNRAHKKELDNVENAFYSERRDVLQSHKNKWTNQSEQRRQKEQE
YLELRQKHVENYEEQLNTLRVQDAEEYNMVKIKLETDVQILEQNLQQMKA
TYQLNQEKLEYNFQVLKKRDEENTITKSQQKRKITRLQDLLNNLKFKLKK
QEQQYKDENQAFSDDLKRMTEQYKELQKKFRHFQTTDNKKFVDIWKMNEE
QTRELIEDLLSADRIIFEQQLGMTWRSPEINFLQKVGPINGSKKAISKTA
LDAATEILAYDESADSNSHGKMTAKTSTKEGSTKQEIEHSHEDLDAPLST
GAIKRMLELLCDESGFLVEAKLIKLLAPIEKDEQSLMKLDAIFNAIGIES
ERDIVSLGKYFYNRYLEKLEQPEDEEEQNGEESLTNENAPITEGANQDQD
QVDTPTNQKQEACDLTNQETASNESLESIPMVVRQELIHPNEVVKSLRKF
IDDNREPFKDSRKSNTVRIGSSSGRDSSYDEQYWTQLASVIDLQRERLWD
GMVSGFEKYSQILKERSTLIGETDSLRQQNSELRMLLHQYLSSKVNQELE
IPPTRVLQVETGHSK

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_000049	XLOC_000049	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00000099	TCONS_00000099	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR029440	DRC1_C

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01

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POSITION

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 252..272
None	No IPR available	COILS	Coil	Coil	coord: 150..221
None	No IPR available	COILS	Coil	Coil	coord: 327..386
None	No IPR available	COILS	Coil	Coil	coord: 274..308
None	No IPR available	PFAM	PF14772	NYD-SP28	coord: 93..192 e-value: 9.8E-29 score: 99.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 466..495
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 571..611
IPR029440	Dynein regulatory complex protein 1, C-terminal	PFAM	PF14775	NYD-SP28_assoc	coord: 682..741 e-value: 2.5E-22 score: 78.6

Blast

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BLAST of TCONS_00000099-protein vs. Swiss-Prot (Human)
Match: DRC1 (Dynein regulatory complex protein 1 OS=Homo sapiens GN=DRC1 PE=2 SV=2)

HSP 1 Score: 575.474 bits (1482), Expect = 0.000e+0
Identity = 351/759 (46.25%), Postives = 479/759 (63.11%), Query Frame = 0

Query:   14 IGPSVDSPLIEERIAARRLRITRRMEALKKDTLGEDVTVKVSSEPTKELSKSRKQIEESFQQLAKLISDGTELVSNIEVACDSREATLRQEEDENVRQRTQKLQDEVKTAAIKFEQITKKWEGALKKDVPQQLKEMLESQRELCDEMIGEKDNLIDELQQDLKQKDDQYVKDLRKQSEDADLMLERMEEQIKTLNRAHKKELDNVENAFYSERRDVLQSHKNKWTNQSEQRRQKEQEYLELRQKHVENYEEQLNTLRVQDAEEYNMVKIKLETDVQILEQNLQQMKATYQLNQEKLEYNFQVLKKRDEENTITKSQQKRKITRLQDLLNNLKFKLKKQEQQYKDENQAFSDDLKRMTEQYKELQKKFRHFQTTDNKKFVDIWKMNEEQTRELIEDLLSADRIIFEQQLGMTWRSPEINFLQKVGPINGSKKAISKTALDAATEILAYDESADSNSHGKMTAKTSTKEGSTKQEIEHSHEDLDAPLSTGAIKRMLELLCDESGFLVEAKLIKLLAPIEKDEQSLMKLDAIFNAIGIESERDIVSLGKYFYNRYLEKLEQPEDEEEQNGEESLTNENAPITEGANQDQDQVDTPTNQKQEACDLTNQETASNESL-----------ESIPMVVRQELIHPNEVVKSLRKFIDDNREPFKDSRKSNTVRIGSSSGRDSSYDEQYWTQLASVIDLQRERLWDGMVSGFEKYSQILKERSTLIGETDSLRQQNSELRMLLHQYLSSKVNQELEIPPTRVLQVET 761
            + PSV S   +ERI ARRLRI  R+EA +++ LGE +  K  SE  +  SKS KQ EES  +LAKL+  GTELV+NI+VA D RE   R EE+E  RQR +KL++EVKT+  KF++IT KWE   +K +PQ+L EML +Q+  C  ++ +K+ LI ELQQ+LK KDDQYVKDL+KQS+D  L+LERMEEQ+K + +  ++EL N+E AF  ER+++L S+K KW    +    KE EYL  R K VE+YE+QLN  R+ D EEYNM+KIKLE DVQILEQ LQQ KA YQLNQEKLEYN QVLKKRDEE+T+ KSQQKRKI RL D+LNNL+ K  KQ +Q+++ENQ+ + D KR+  Q+KELQK  RHF   D++KF +IW MNEE+ ++LI      DRII    LG+ W +P+  FL  VGP       IS+    +AT+I+            +M  ++  +E         S+ DL   +S    KR+L LLCDESGFL+E+KL+ LL P+E++E  L++LDAIF+A+GIESE D+  L  +F      +L             S + +  P ++ + +     +T T  + E  + T  E    ESL              P V     IHPN+V+K L  F+   ++P +DSR    V+    + RD+S D +YW  L +VI   ++ LWD + +  EKY  +L +R+ L+ E  SL QQN+EL+ LL QYL+SK+N EL++PPT+VL+V T
Sbjct:   23 LAPSVHSDNSQERIQARRLRIAARLEARRREALGEYLDGKKESEEDQ--SKSYKQKEESRLKLAKLLLCGTELVTNIQVAIDIREIHRRVEEEEIKRQRIEKLENEVKTSQDKFDEITSKWEEGKQKRIPQELWEMLNTQQLHCAGLLEDKNKLISELQQELKTKDDQYVKDLKKQSDDICLLLERMEEQVKNVMKTFREELYNIEKAFEVERQELLASNKKKWEQALQAHNAKELEYLNNRMKKVEDYEKQLNRQRIWDCEEYNMIKIKLEQDVQILEQQLQQRKAIYQLNQEKLEYNLQVLKKRDEESTVIKSQQKRKINRLHDILNNLRSKYAKQIKQFQEENQSLTSDYKRLVMQFKELQKAMRHFALIDDEKFWEIWLMNEEEAKDLIARAFDVDRIIHTHHLGLPWAAPDFWFLNNVGP-------ISQQPQKSATQIVE-----------EMLMRSEEEEAEEAAAEPESYLDLPKQISEKTTKRILMLLCDESGFLIESKLLSLLLPLEQNECYLLRLDAIFSALGIESEDDLYKLVNFFLKYRAHRL-------------SSSLQIKPCSQASMEKASMEETSTRSELELAEQTEMEGEKEESLVEGEKEEEEETPPSPWV-----IHPNDVLKILEAFVMGLKKP-RDSRAPLRVQ---KNVRDNSKDSEYWQALTTVIPSSKQNLWDALYTALEKYHLVLTQRAKLLLENSSLEQQNTELQALLQQYLNSKINSELQVPPTQVLRVPT 739

The following BLAST results are available for this feature:

BLAST of TCONS_00000099-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00000099-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1

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Match Name	E-value	Identity	Description
DRC1	0.000e+0	46.25	Dynein regulatory complex protein 1 OS=Homo sapien...	[more]

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TCONS_00000099-protein (polypeptide) - C. hemisphaerica

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