TCONS_00000088-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00000088-protein
Unique NameTCONS_00000088-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length810

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00000088-protein ID=TCONS_00000088-protein|Name=TCONS_00000088-protein|organism=Clytia hemisphaerica|type=polypeptide|length=810bp
MYVTRKLVRNVLPFACKRRLSTKTFPTSAEVVIAGGGIIGTSIAYHLAEL
GWKDIFILEQGTPGCGTSWHAAGNVISLRGNYIDTQNVLYGQSLFQQFEK
EYGVGYKKCGSLSLAQTDERAKFLRRMEVMVNGFGGECYLVSPAEAQRLN
PHIQINDIKLGLFSPNDNVVNPTDCINAFLNGAKKNGSTRLLEGVEVERV
GCEGRRVTHVQTNKGTIKCDFFVNSAGLWARELGQKSDIPVQVPLHACQH
FYIVTKPCGVDSMMPITRDYDSFVYTREWSGGFLTGGFEPKPLPCFHDNI
PEKFEFQLLDENWEQFMPLMEGISNRYPLIETAEVRSFVNGPESFTPDYH
PHISKSMELDNYFIAAGMTSFGIAFSGGTGRVLAELITYRESPNYDPYTA
DIRRLEPGCNNKKRCRTGALNTLENTFLLKYPDKCYASPRNILTSSVHTH
LTEHGAVWIKDYGWEIPTYFKEETQDEFPGSFGRPAWLQNVQDEIKAAKT
SIGIVDLSSQSVFKLMEIKDGSLLDVLEEILPSDTFNALRAGKTSMVTPV
INKHGRCVAKATVNKLSDSILLTTDPVSHNYLNTMLEELLHKDKHSKRVI
LQNVTDAYGCFGVVGPQTRSLLESLIPPPDNGMVKHLEGCEVLDVGYASN
VIIHPAAFGDGFHLLIPTNQCQGLYQELMTEGISYGIRNIGHYAWDSLRV
QKGIGKVPNEIGLNTPSEVMKQYSTEEGLPNIKLLKIEITEDEIWPIGGE
EIIHKKSQQTLGEITSIGYDEEKLDEVYTLVDISMEVEEKDVLVKTASGN
FKAKFISYFF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_000045XLOC_000045Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00000088TCONS_00000088Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006076FAD-dep_OxRdtase
IPR023753FAD/NAD-binding_dom
IPR006222GCV_T_N
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
molecular_function GO:0016491 oxidoreductase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.9.10coord: 189..346
e-value: 9.1E-31
score: 106.2
NoneNo IPR availableGENE3D3.30.1360.120coord: 586..701
e-value: 8.2E-10
score: 38.3
NoneNo IPR availableGENE3D3.30.1360.120coord: 442..585
e-value: 2.1E-7
score: 30.2
NoneNo IPR availableGENE3D3.30.9.10coord: 108..188
e-value: 7.8E-4
score: 19.0
NoneNo IPR availableSUPERFAMILY103025Folate-binding domaincoord: 440..712
NoneNo IPR availableSUPERFAMILY54373FAD-linked reductases, C-terminal domaincoord: 245..346
IPR006076FAD dependent oxidoreductasePFAMPF01266DAOcoord: 31..386
e-value: 1.1E-51
score: 176.4
IPR023753FAD/NAD(P)-binding domainGENE3D3.50.50.60coord: 8..77
e-value: 0.0015
score: 17.9
IPR023753FAD/NAD(P)-binding domainSUPERFAMILY51905FAD/NAD(P)-binding domaincoord: 30..243
coord: 347..410
IPR006222Glycine cleavage T-protein-like, N-terminalPFAMPF01571GCV_Tcoord: 448..713
e-value: 2.5E-32
score: 112.2

Blast
[Close]
BLAST of TCONS_00000088-protein vs. Swiss-Prot (Human)
Match: PDPR (Pyruvate dehydrogenase phosphatase regulatory subunit, mitochondrial OS=Homo sapiens GN=PDPR PE=1 SV=2)

HSP 1 Score: 383.259 bits (983), Expect = 4.313e-120
Identity = 246/732 (33.61%), Postives = 393/732 (53.69%), Query Frame = 0 
Query:    8 VRNVLPFACKRRLSTKTFPTSAEVVIAGGGIIGTSIAYHLAELGWKDIFILEQGTPGCGTSWHAAGNVISLRGNYIDTQNVLYGQSLFQQFEKEYGV--GYKKCGSLSLAQTDERAKFLRRMEVMVNGFGGECYLVSPAEAQRLNPHIQINDIKLGLFSPNDNVVNPTDCINAFLNGAKKNGSTRLLEGVEVERVGCEGRRVTHVQTNKGTIKCDFFVNSAGLWARELGQKSDIPVQVPLHACQHFYIVTKPCG--VDSMMPITRDYDSFVYTREWSGGFLTGGFEPKPLPCFHDNIPEKFEFQLLDENWEQFMPLMEGISNRYPLIETAEVRSFVNGPESFTPDYHPHISKSMELDNYFIAAGMTSFGIAFSGGTGRVLAELITYRESPNYDPYTADIRRLEPGCNNKKRCRTGALNTLENTFLLKYPDKCYASPRNILTSSVHTHLTEHGAVWIKDYGWEIPTYFKEETQD----EFPGSFGRPAWLQNVQDEIKAAKTSIGIVDLSSQSVFKLMEIKDGSLLDVLEEILPSDTFNALRAGKTSMV-TPVINKHG---RCVAKATVNKLSDSILLTTDPVSHNYLNTMLEELLHKDKHSKRVILQNVTDAYGCFGVVGPQTRSLLESLIPPPDNGMVKHLEG--CEVLDVGYASNV-IIHPAAFGD-GFHLLIPTNQCQGLYQELMTEGISYGIRNIGHYAWDSLRVQKGIGKVPNEI-GLNTPSEVMKQ 722
             RN    A  R ++    PT A+VVI GGGI GTS+AYHL+++GWKDI +LEQG    G++   AG + + R   I+ +   Y   L+ Q E+E G+  GY + GS+ LAQT +R   L+R+   +N  G    ++SP +   L+  + ++D+   +  P D VV+  D   A  + A +NG  ++ +   V  V  +  +VT V+T+KG I+C +FVN AG WA ELG  ++ PV +PLHAC+HFY++T+P    + S  P   D D  +Y R W GG L+GGFE  P P F +    + E Q L E+W+ F PL+  +  R P +ET E+   VN PE+FTPD    + +S  +  YF+ AGM S G++F GG G+ LAE + +   P+ + +  D++R     +++   R   +  +   + LK P   + + R + TS ++  L   GA W++ +G+E P YF    +D    E   +F +P W   V+ E+K  K ++ ++D+SS + F++    D + L+VL+ +  +D    L      +V T ++N+ G      + A +NK S  ++  TD   H +    L++ + KD +   ++L++VT  Y    ++GP+   +L  L   P      H     C+ + VGYA+ + ++     G+ GF L IP      +Y E+M+ G  YGIRN G+YA  SLR++K       +I  L TP E  ++
Sbjct:   25 ARNSTSAAEARSMA---LPTQAQVVICGGGITGTSVAYHLSKMGWKDIVLLEQGRLAAGSTRFCAGILSTARHLTIEQKMADYSNKLYYQLEQETGIQTGYTRTGSIFLAQTQDRLISLKRINAGLNVIGIPSEIISPKKVAELHHLLNVHDLVGAMHVPEDAVVSSADVALALASAASQNG-VQIYDRTSVLHVMVKKGQVTGVETDKGQIECQYFVNCAGQWAYELGLSNEEPVSIPLHACEHFYLLTRPLETPLQSSTPTIVDADGRIYIRNWQGGILSGGFEKNPKPIFTEG-KNQLEIQNLQEDWDHFEPLLSSLLRRMPELETLEIMKLVNCPETFTPDMRCIMGESPAVQGYFVLAGMNSAGLSFGGGAGKYLAEWMVH-GYPSENVWELDLKRFGALQSSRTFLRHRVMEVMPLMYDLKVPRWDFQTGRQLRTSPLYDRLDAQGARWMEKHGFERPKYFVPPDKDLLALEQSKTFYKPDWFDIVESEVKCCKEAVCVIDMSSFTKFEITSTGDQA-LEVLQYLFSND----LDVPVGHIVHTGMLNEGGGYENDCSIARLNKRSFFMISPTDQQVHCW--AWLKKHMPKDSN---LLLEDVTWKYTALNLIGPRAVDVLSELSYAPMTP--DHFPSLFCKEMSVGYANGIRVMSMTHTGEPGFMLYIPIEYALHVYNEVMSVGQKYGIRNAGYYALRSLRIEKFFAFWGQDINNLTTPLECGRE 738
The following BLAST results are available for this feature:
BLAST of TCONS_00000088-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PDPR4.313e-12033.61Pyruvate dehydrogenase phosphatase regulatory subu... [more]
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