TCONS_00000078-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00000078-protein
Unique NameTCONS_00000078-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1375

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00000078-protein ID=TCONS_00000078-protein|Name=TCONS_00000078-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1375bp
MDLNDLCDLENPDDDVIVDAIKKRYECGYFYTCIGDILISINPYKESILN
SLEVSHRYKDEPSLTQTNPHVFGTTNNLYHFLNVNKESQCFIVSGESGSG
KSEVIHQAVTHFLCLVSTSDRSFKERILQANVILEAFGNARTSLNSNATR
FCKYLKFHFDSKLHLSGVSITDYLLELPRVSNQRQGEANFNIFYYMFSGR
TEDELSKQLLDTPTQHKYLKYGEFFGDDLLSWSQAYESLIDAFQVVGFTQ
ETVKEIFGILSAILNIGDLKFKCEDETTGVFVDNLEILDKVSILLGVDTS
DLELCLTSNLFVKPDDGVSGFKSLSEAEQTRDFMANFMYARLFSWIVSNI
NTFLNPGEPKKKQSEHVHVGFLDIFGFEDFQKNTLEQLCINTTNEQINLH
FIQHVFAREQVDYQEEGLSELQLVEYFDNKNIVNLLLETPHGIFALLEEE
SKCLQADDQTLVSSFNAHCSELKFYIPSTANASTFSIVHYNKKVTYAADD
FILRNNAKLDGCLIECLRGSKGQLTSTLFNSSLTKTGALIIKQGHGTVNC
CQGDLRGAYTKRINHRLKKEGKCNTSKACHNTKSKQRTFTARKHKNNSVA
VQFRNSLVDLIETILLCQAHFVRCIKPNKVKEADNFDVDFVRAQIKCNGI
LDSVRIRKDGFPVRLPFKIFVERYRFVKFDMTSPLENTGEICQQILQHCN
IDDGYKIGATRVLLRLEHVQKLLSSLDEQTRRIVIAQKMVRGKLARIDFD
FLQTSRKQEDRNVGNLLVSISSRSSKMHDNLLILNDYDLKRHQRVKDKEM
KKEIEKENFIQKRKLTSATDPELKLRESQQRPAPENSPNRKVPRNKQRTQ
TEPLIRNFISGPQSAWCMVKCYERQFHIASFQMEEAVICVDGTHTFSDKN
RIAFATLPVRADDPKVAKVKSCIGKGVQLHQDERQNLWATRLGKNPIFVR
GHTLCPELVKLNGKLTQGVPMKVLDTAAFKDYMREEVEKNGGVTEDLKDR
IMSKLKICMSFIKDTHLDEETPCWFEIWLVKVKEHVRRYLDNQQKREKRK
SGHLDMRITQTQESVKRIAAMPEMRRAKSGDHLRRPRSNTAGPNPAETTG
KPARSSRPPSQIIGEKSIARHRGTTSADTTAQWRVEQKITQEMLQRERSM
DMIRREKSMDVRLESRLLMEREYRNSMGKPLVESQHVNRVRGSEKSSPGQ
SPPQSLARSTGSSMGSRKDNSTTANDSPRIVNGPHTPVSRMPAHSQQNPH
EEFRRGGSVAAAREGMSYRQVFGLQSSDYLFNVTPPNYTRHRRFSDSDTE
SLHNFNFIHKVITQPSTPTHQSTQQLTNAQQTPSQQTEDPKKSKVLQQPK
SWMKKVRRKSEDNPKRKVVAQLSNK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_000041XLOC_000041Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00000078TCONS_00000078Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001609Myosin_head_motor_dom
IPR001132SMAD_dom_Dwarfin-type
IPR017855SMAD_dom-like
IPR000048IQ_motif_EF-hand-BS
IPR027417P-loop_NTPase
IPR008984SMAD_FHA_domain
Vocabulary: Cellular Component
TermDefinition
GO:0016459myosin complex
GO:0005622intracellular
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0003774motor activity
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005622 intracellular
cellular_component GO:0016459 myosin complex
molecular_function GO:0005524 ATP binding
molecular_function GO:0003774 motor activity
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001609Myosin head, motor domainPRINTSPR00193MYOSINHEAVYcoord: 31..50
score: 41.13
coord: 422..450
score: 23.41
coord: 88..113
score: 36.12
coord: 368..396
score: 59.32
coord: 132..159
score: 52.39
IPR001609Myosin head, motor domainSMARTSM00242MYSc_2acoord: 1..729
e-value: 1.2E-164
score: 563.0
IPR001609Myosin head, motor domainPFAMPF00063Myosin_headcoord: 4..715
e-value: 7.1E-165
score: 549.9
IPR001609Myosin head, motor domainPROSITEPS51456MYOSIN_MOTORcoord: 1..727
score: 157.26
IPR001132SMAD domain, Dwarfin-typeSMARTSM00524dwBultra2coord: 864..1030
e-value: 4.4E-7
score: 34.3
IPR001132SMAD domain, Dwarfin-typePFAMPF03166MH2coord: 865..1029
e-value: 6.3E-18
score: 65.5
IPR001132SMAD domain, Dwarfin-typePROSITEPS51076MH2coord: 866..1055
score: 21.91
NoneNo IPR availableGENE3D3.40.50.300coord: 61..463
e-value: 6.4E-4
score: 18.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1043..1062
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1177..1258
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1316..1375
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 820..853
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1070..1133
NoneNo IPR availableCDDcd00124MYSccoord: 15..715
e-value: 0.0
score: 597.651
IPR017855SMAD domain-likeGENE3D2.60.200.10coord: 859..1053
e-value: 9.5E-27
score: 93.3
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 729..758
score: 6.687
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 2..538
coord: 591..722
IPR008984SMAD/FHA domainSUPERFAMILY49879SMAD/FHA domaincoord: 860..1032

Blast
[Close]
BLAST of TCONS_00000078-protein vs. Swiss-Prot (Human)
Match: MYO3B (Myosin-IIIb OS=Homo sapiens GN=MYO3B PE=2 SV=4)

HSP 1 Score: 451.055 bits (1159), Expect = 7.726e-136
Identity = 276/779 (35.43%), Postives = 425/779 (54.56%), Query Frame = 0 
Query:    4 NDLCDLENPDDDVIVDAIKKRYECGYFYTCIGDILISINPYKESILNSLEVSHRYKDEPSLTQTNPHVFGTTNNLYHFLNVNKESQCFIVSGESGSGKSEVIHQAVTHFLCLVSTSDRSFKERILQANVILEAFGNARTSLNSNATRFCKYLKFHFDSKLHLSGVSITDYLLELPRVSNQRQGEANFNIFYYMFSG-RTEDELSKQLLDTPTQHKYL--KYGEFFGD--DLLSWSQAYESLIDAFQVVGFTQETVKEIFGILSAILNIGDLKFKC---EDETTGVFVDNLEILDKVSILLGVDTSDLELCLTSNLFVKPDDGVSGFKSLSEAEQTRDFMANFMYARLFSWIVSNINTFLNPGEPKKKQSEHVHVGFLDIFGFEDFQKNTLEQLCINTTNEQINLHFIQHVFAREQVDYQEEGLSELQLVEYFDNKNIVNLLLETPHGIFALLEEESKCLQADDQTLVSSFNAHCSELKFYIPSTANASTFSIVHYNKKVTYAADDFILRNNAKLDGCLIECLRGSKGQLTSTLFNSSLTKTGALIIKQGHGTVNCCQGDLRGAYTKRINHRLKKEGKCNTSKACHNTKSKQRTFTARKHKNNSVAVQFRNSLVDLIETILLCQAHFVRCIKPNKVKEADNFDVDFVRAQIKCNGILDSVRIRKDGFPVRLPFKIFVERYRFVKFDMTSPLENTGEICQQILQHCNIDDGYKIGATRVLLRLEHVQKLLSSLDEQTRRIVIAQKMVRGKLARIDFDFLQTSRKQEDRNVGNLLVSISSRS 774
            +DL +LE  D+D I+  ++KRY     YT +GDILI++NP++   + S + S  Y      +   PH+F + +  Y  +    + QC ++SGESGSGK+E  H  V H   L   ++++ +E+ILQ N ++EAFGN+ T++N N++RF KYL+  F     + G  I++YLLE  RV  Q   E NF+IFYY+++G   + +LS   L      +Y+  + G    D     S+ + +E++   F+++GFT + V  ++ IL+ ILNIG+++F     + +T    V N E L   + +L +   +L+  LTS+  V   + +    ++  A   RD M+  +Y RLFSWIV+ INT L P E        ++VG LDIFGFE+FQ+N+ EQLCIN  NEQI  +F QHVFA EQ++YQ EG+  +  VEY DN+ ++++ L+ P G+ ALL+EES+  QA DQTLV  F  +     F+ P       F I HY  KV Y A   + +N   L   ++  LR S+ +L   LF+  LTKTG L   +   TV         A +    H    + K +T +   + +           K  +VA  FR SL+DL+  +++ Q HFVRCIKPN  +EA  F  + V AQ++  GIL++V IR+ G+  R+ F+ FV+RY ++ F        + E C  IL+   +D  + +G T+V L+  HV++L   L E   R+V+ Q   +G L    +      R +E R  G + +  + R 
Sbjct:  346 DDLVNLEVLDEDTIIHQLQKRYADLLIYTYVGDILIALNPFQNLSIYSPQFSRLYHGVKRASNP-PHIFASADAAYQCMVTLSKDQCIVISGESGSGKTESAHLIVQHLTFLGKANNQTLREKILQVNSLVEAFGNSCTAINDNSSRFGKYLEMMFTPTGVVMGARISEYLLEKSRVIKQAAREKNFHIFYYIYAGLHHQKKLSDFRLPEEKPPRYIADETGRVMHDITSKESYRRQFEAIQHCFRIIGFTDKEVHSVYRILAGILNIGNIEFAAISSQHQTDKSEVPNAEALQNAASVLCISPEELQEALTSHCVVTRGETIIRANTVDRAADVRDAMSKALYGRLFSWIVNRINTLLQPDENICSAGGGMNVGILDIFGFENFQRNSFEQLCINIANEQIQYYFNQHVFALEQMEYQNEGIDAVP-VEYEDNRPLLDMFLQKPLGLLALLDEESRFPQATDQTLVDKFEDNLRCKYFWRPKGVEL-CFGIQHYAGKVLYDASGVLEKNRDTLPADVVVVLRTSENKLLQQLFSIPLTKTGNLAQTRARITV---------ASSSLPPHFSAGKAKVDTLEVIRHPEETTNM------KRQTVASYFRYSLMDLLSKMVVGQPHFVRCIKPNDDREALQFSRERVLAQLRSTGILETVSIRRQGYSHRILFEEFVKRYYYLAFTAHQTPLASKESCVAILEKSRLDH-WVLGKTKVFLKYYHVEQLNLLLREVIGRVVVLQAYTKGWLGARRY-----KRVREKREKGAIAIQSAWRG 1100
The following BLAST results are available for this feature:
BLAST of TCONS_00000078-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MYO3B7.726e-13635.43Myosin-IIIb OS=Homo sapiens GN=MYO3B PE=2 SV=4[more]
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