TCONS_00000030-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00000030-protein
Unique Name	TCONS_00000030-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	714

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00000030-protein ID=TCONS_00000030-protein|Name=TCONS_00000030-protein|organism=Clytia hemisphaerica|type=polypeptide|length=714bp
MGENGSVNGDKVGGRNVNGVDWNQYGLASDTNHPAALNDNGSKGFLSSYP
KEEVKELFEHEQENGSETDQEPWWKSNFFVTKKVLFGTWDGVFTSCVMNI
VGVVVFLRTGWMVGFAGTGLSLLILLISFLVALVTLMSAVGVSDRCDLGH
GGVYFILTHVLGGKVGGTVGLMYCVGHCIATSLYCTGFSESMVGLMNWDH
PWAIRLVSIITLVVLVGIALSGVKWIVRFQLVLIIILAIAMCDFILGTLA
QEKPESGFSGFKNANFVENLKSDFNKDISFFVVFGVFFPTACGVLAGVNM
SGDLKEPGQNIPEGSVAALALCGFIYTILVLFLGSTCTREALQTDSLIME
KISLVGALLIFGLFVAALSSILGGLVGPPRVLQRIAEDNVLPILKPFAEL
SGGNKEPRNATLLCASIALIFIFVGNLNQLAPIVTMPFLMTYTIINYAYF
AMAMSYDVKLKQTARVEGRYNSPTKNNNKSVEMCDYGSTTVTKRRTWENG
NEYHELTSDDGGDVVAEEETVIDNSKTLEVKEPPDYDTSQRESGLAVSDH
DEELNVESNRVSSEDTTSYQRQRSLNEGQYLEFIHERNTNTLYGRLCNRW
VSLFTSFVCLVLSFCVSWAYALANLSITLILFIFVSQARPGLSPGVASDF
NFGVWLCTLLPRDKKDEEQEHVIIQSSQVPYGISMHVITQENMDYEHRDR
KHLASTINKPQPYH

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_000019	XLOC_000019	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00000030	TCONS_00000030	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR004841	AA-permease/SLC12A_dom

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0006810	transport
GO:0055085	transmembrane transport

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
biological_process	GO:0006810	transport
cellular_component	GO:0016020	membrane

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004841	Amino acid permease/ SLC12A domain	PFAM	PF00324	AA_permease	coord: 92..470 e-value: 4.1E-54 score: 183.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 530..569

Blast

[Close]

BLAST of TCONS_00000030-protein vs. Swiss-Prot (Human)
Match: S12A8 (Solute carrier family 12 member 8 OS=Homo sapiens GN=SLC12A8 PE=2 SV=4)

HSP 1 Score: 459.529 bits (1181), Expect = 1.533e-152
Identity = 266/710 (37.46%), Postives = 405/710 (57.04%), Query Frame = 0

Query:   53 EVKELFEHEQENGSETDQEPWWKSNFFVTKKVLFGTWDGVFTSCVMNIVGVVVFLRTGWMVGFAGTGLSLLILLISFLVALVTLMSAVGVSDRCDLGHGGVYFILTHVLGGKVGGTVGLMYCVGHCIATSLYCTGFSESMVGLMNWDHPWAIRLVSIITLVVLVGIALSGVKWIVRFQLVLIIILAIAMCDFILGTLAQEKPESGFSGFKNANFVENLKSDFNKDISFFVVFGVFFPTACGVLAGVNMSGDLKEPGQNIPEGSVAALALCGFIYTILVLFLGSTCTREALQTDSLIMEKISLVGALLIFGLFVAALSSILGGLVGPPRVLQRIAEDNVLPILKPFAELSGGNKEPRNATLLCASIALIFIFVGNLNQLAPIVTMPFLMTYTIINYAYFAMAM--------------------------------SYDVKLKQTARVEGRYNSPTKNNNKSVEMCDYGSTTVTKRRTWENGNEYHELTSDDGGDVVAEEETVIDNSKTLEVKEPPDYDTSQRESGLAVSDHDEELNVESNRVSSEDTT---SYQRQ---------RSLNEGQYLE-FIHE----RNTNTLYGRLCNRWVSLFTSFVCLVLSFCVSWAYALANLSITLILFIFVSQARPGLSPGVASDFNFGVWLCTLLPRDKKD--EEQEHVIIQSSQVPYGISMHVITQENMDYEHRDRKHLASTINKPQ 711
            +V+ELF    +  +    +PWWK+  F+ + VLFGTWDGVFTSC++NI GVV+FLRTGW+VG  G  L + ++    LVALVT++S +GV +R  +G GGVY +++ VLGG+ GGT+GL+Y  G C+A ++Y TGF+ES+  L+   + WA+R +S+  L+ L+GI L+GVKWI+R QL+L+ +LA++  DF++G+     PE GF G+       N   D++   SFF VFGVFFP A GV+AG NM GDL+EP  +IP GS+AA+ +  F+Y I V  LG+ CTREAL+ D LI EK+SL+G L + GL++++L+S +GGL G PR+LQ IA++ V+P L    +  G NK P  A  L + + + F+FVG +N LAPIVT+ F++TY  ++Y+YF+++M                                SY  +      +EG     TK+ ++ +++     ++  ++     GN   E  S       A ++T+ D S  L++K PP +     +   A S   +E         SE T    +Y  Q          S  E  +L+  + E    R + + Y  +CN WVSL  +   L++ F + W Y L N+ +  I++ ++ +A PGL  G AS+F+F  W+ +LL    +     QE +I+  S     + M  +TQEN D+  RDR H +S +N+ Q
Sbjct:    6 QVQELFHEAAQQDALAQPQPWWKTQLFMWEPVLFGTWDGVFTSCMINIFGVVLFLRTGWLVGNTGVLLGMFLVSFVILVALVTVLSGIGVGERSSIGSGGVYSMISSVLGGQTGGTIGLLYVFGQCVAGAMYITGFAESISDLLGLGNIWAVRGISVAVLLALLGINLAGVKWIIRLQLLLLFLLAVSTLDFVVGSFTHLDPEHGFIGYSPELLQNNTLPDYSPGESFFTVFGVFFPAATGVMAGFNMGGDLREPAASIPLGSLAAVGISWFLYIIFVFLLGAICTREALRYDFLIAEKVSLMGFLFLLGLYISSLASCMGGLYGAPRILQCIAQEKVIPALACLGQGKGPNKTPVAAICLTSLVTMAFVFVGQVNVLAPIVTINFMLTYVAVDYSYFSLSMCSCSLTPVPEPVLREGAEGLHCSEHLLLEKAPSYGSEGPAQRVLEGTLLEFTKDMDQLLQLTRKLESSQPRQ---GEGNRTPE--SQKRKSKKATKQTLQD-SFLLDLKSPPSFPVEISDRLPAASWEGQESCWNKQTSKSEGTQPEGTYGEQLVPELCNQSESSGEDFFLKSRLQEQDVWRRSTSFYTHMCNPWVSLLGAVGSLLIMFVIQWVYTLVNMGVAAIVYFYIGRASPGLHLGSASNFSFFRWMRSLLLPSCRSLRSPQEQIILAPSLAKVDMEMTQLTQENADFATRDRYHHSSLVNREQ 709

The following BLAST results are available for this feature:

BLAST of TCONS_00000030-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00000030-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
S12A8	1.533e-152	37.46	Solute carrier family 12 member 8 OS=Homo sapiens ...	[more]

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TCONS_00000030-protein (polypeptide) - C. hemisphaerica