TCONS_00000030-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00000030-protein
Unique NameTCONS_00000030-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length714

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00000030-protein ID=TCONS_00000030-protein|Name=TCONS_00000030-protein|organism=Clytia hemisphaerica|type=polypeptide|length=714bp
MGENGSVNGDKVGGRNVNGVDWNQYGLASDTNHPAALNDNGSKGFLSSYP
KEEVKELFEHEQENGSETDQEPWWKSNFFVTKKVLFGTWDGVFTSCVMNI
VGVVVFLRTGWMVGFAGTGLSLLILLISFLVALVTLMSAVGVSDRCDLGH
GGVYFILTHVLGGKVGGTVGLMYCVGHCIATSLYCTGFSESMVGLMNWDH
PWAIRLVSIITLVVLVGIALSGVKWIVRFQLVLIIILAIAMCDFILGTLA
QEKPESGFSGFKNANFVENLKSDFNKDISFFVVFGVFFPTACGVLAGVNM
SGDLKEPGQNIPEGSVAALALCGFIYTILVLFLGSTCTREALQTDSLIME
KISLVGALLIFGLFVAALSSILGGLVGPPRVLQRIAEDNVLPILKPFAEL
SGGNKEPRNATLLCASIALIFIFVGNLNQLAPIVTMPFLMTYTIINYAYF
AMAMSYDVKLKQTARVEGRYNSPTKNNNKSVEMCDYGSTTVTKRRTWENG
NEYHELTSDDGGDVVAEEETVIDNSKTLEVKEPPDYDTSQRESGLAVSDH
DEELNVESNRVSSEDTTSYQRQRSLNEGQYLEFIHERNTNTLYGRLCNRW
VSLFTSFVCLVLSFCVSWAYALANLSITLILFIFVSQARPGLSPGVASDF
NFGVWLCTLLPRDKKDEEQEHVIIQSSQVPYGISMHVITQENMDYEHRDR
KHLASTINKPQPYH
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_000019XLOC_000019Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00000030TCONS_00000030Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004841AA-permease/SLC12A_dom
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
GO:0055085transmembrane transport
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055085 transmembrane transport
biological_process GO:0006810 transport
cellular_component GO:0016020 membrane
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004841Amino acid permease/ SLC12A domainPFAMPF00324AA_permeasecoord: 92..470
e-value: 4.1E-54
score: 183.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 530..569

Blast
BLAST of TCONS_00000030-protein vs. Swiss-Prot (Human)
Match: S12A8 (Solute carrier family 12 member 8 OS=Homo sapiens GN=SLC12A8 PE=2 SV=4)

HSP 1 Score: 459.529 bits (1181), Expect = 1.533e-152
Identity = 266/710 (37.46%), Postives = 405/710 (57.04%), Query Frame = 0
Query:   53 EVKELFEHEQENGSETDQEPWWKSNFFVTKKVLFGTWDGVFTSCVMNIVGVVVFLRTGWMVGFAGTGLSLLILLISFLVALVTLMSAVGVSDRCDLGHGGVYFILTHVLGGKVGGTVGLMYCVGHCIATSLYCTGFSESMVGLMNWDHPWAIRLVSIITLVVLVGIALSGVKWIVRFQLVLIIILAIAMCDFILGTLAQEKPESGFSGFKNANFVENLKSDFNKDISFFVVFGVFFPTACGVLAGVNMSGDLKEPGQNIPEGSVAALALCGFIYTILVLFLGSTCTREALQTDSLIMEKISLVGALLIFGLFVAALSSILGGLVGPPRVLQRIAEDNVLPILKPFAELSGGNKEPRNATLLCASIALIFIFVGNLNQLAPIVTMPFLMTYTIINYAYFAMAM--------------------------------SYDVKLKQTARVEGRYNSPTKNNNKSVEMCDYGSTTVTKRRTWENGNEYHELTSDDGGDVVAEEETVIDNSKTLEVKEPPDYDTSQRESGLAVSDHDEELNVESNRVSSEDTT---SYQRQ---------RSLNEGQYLE-FIHE----RNTNTLYGRLCNRWVSLFTSFVCLVLSFCVSWAYALANLSITLILFIFVSQARPGLSPGVASDFNFGVWLCTLLPRDKKD--EEQEHVIIQSSQVPYGISMHVITQENMDYEHRDRKHLASTINKPQ 711
            +V+ELF    +  +    +PWWK+  F+ + VLFGTWDGVFTSC++NI GVV+FLRTGW+VG  G  L + ++    LVALVT++S +GV +R  +G GGVY +++ VLGG+ GGT+GL+Y  G C+A ++Y TGF+ES+  L+   + WA+R +S+  L+ L+GI L+GVKWI+R QL+L+ +LA++  DF++G+     PE GF G+       N   D++   SFF VFGVFFP A GV+AG NM GDL+EP  +IP GS+AA+ +  F+Y I V  LG+ CTREAL+ D LI EK+SL+G L + GL++++L+S +GGL G PR+LQ IA++ V+P L    +  G NK P  A  L + + + F+FVG +N LAPIVT+ F++TY  ++Y+YF+++M                                SY  +      +EG     TK+ ++ +++     ++  ++     GN   E  S       A ++T+ D S  L++K PP +     +   A S   +E         SE T    +Y  Q          S  E  +L+  + E    R + + Y  +CN WVSL  +   L++ F + W Y L N+ +  I++ ++ +A PGL  G AS+F+F  W+ +LL    +     QE +I+  S     + M  +TQEN D+  RDR H +S +N+ Q
Sbjct:    6 QVQELFHEAAQQDALAQPQPWWKTQLFMWEPVLFGTWDGVFTSCMINIFGVVLFLRTGWLVGNTGVLLGMFLVSFVILVALVTVLSGIGVGERSSIGSGGVYSMISSVLGGQTGGTIGLLYVFGQCVAGAMYITGFAESISDLLGLGNIWAVRGISVAVLLALLGINLAGVKWIIRLQLLLLFLLAVSTLDFVVGSFTHLDPEHGFIGYSPELLQNNTLPDYSPGESFFTVFGVFFPAATGVMAGFNMGGDLREPAASIPLGSLAAVGISWFLYIIFVFLLGAICTREALRYDFLIAEKVSLMGFLFLLGLYISSLASCMGGLYGAPRILQCIAQEKVIPALACLGQGKGPNKTPVAAICLTSLVTMAFVFVGQVNVLAPIVTINFMLTYVAVDYSYFSLSMCSCSLTPVPEPVLREGAEGLHCSEHLLLEKAPSYGSEGPAQRVLEGTLLEFTKDMDQLLQLTRKLESSQPRQ---GEGNRTPE--SQKRKSKKATKQTLQD-SFLLDLKSPPSFPVEISDRLPAASWEGQESCWNKQTSKSEGTQPEGTYGEQLVPELCNQSESSGEDFFLKSRLQEQDVWRRSTSFYTHMCNPWVSLLGAVGSLLIMFVIQWVYTLVNMGVAAIVYFYIGRASPGLHLGSASNFSFFRWMRSLLLPSCRSLRSPQEQIILAPSLAKVDMEMTQLTQENADFATRDRYHHSSLVNREQ 709          
The following BLAST results are available for this feature:
BLAST of TCONS_00000030-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
S12A81.533e-15237.46Solute carrier family 12 member 8 OS=Homo sapiens ... [more]
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