TCONS_00000001-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00000001-protein
Unique Name	TCONS_00000001-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	373

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00000001-protein ID=TCONS_00000001-protein|Name=TCONS_00000001-protein|organism=Clytia hemisphaerica|type=polypeptide|length=373bp
MEGNKDEALKCFQFAIKFLDSGHVEKAKKFAEKSIRLYPTTIAEELLGKI
NSDQASPNGSAGSHDHVRRRRRTNSGRKEEEAKAETKEKNYTPEQVEDVE
KIKKCKDFYEVLSVSKSPSEADLKKSYRKLALKFHPDKNQAPGAAEAFKR
IAAAFETLGDPEKKRKYDTYGENAGPTTRRTRRNYHEEEFEDISPEDIFN
MFFGGGFPDGRVHVRRGRRGQQTYFRQNTHSHNNNHHQNENVSSLYPLVQ
ILPVLLIILFSMLSSFLIPEPIFSFQPTSQYRYPMTTFKLGIKYYVKDRH
VRQKHEDYNSIELKIEREFIETLQVRCYRERQYKAELRQQGHMWGSRELL
EKADNYHPESCDKLKELQGRVHD

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_000001	XLOC_000001	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00000001	TCONS_00000001	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001623	DnaJ_domain
IPR011990	TPR-like_helical_dom
IPR015399	DUF1977_DnaJ-like
IPR018253	DnaJ_domain_CS

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01

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POSITION

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001623	DnaJ domain	PRINTS	PR00625	JDOMAIN	coord: 163..182 score: 25.71 coord: 109..127 score: 44.03 coord: 127..142 score: 58.95 coord: 143..163 score: 44.58
IPR001623	DnaJ domain	SMART	SM00271	dnaj_3	coord: 106..163 e-value: 9.1E-25 score: 98.3
IPR001623	DnaJ domain	GENE3D	1.10.287.110		coord: 109..216 e-value: 9.3E-32 score: 109.3
IPR001623	DnaJ domain	PFAM	PF00226	DnaJ	coord: 107..168 e-value: 3.6E-22 score: 78.2
IPR001623	DnaJ domain	PROSITE	PS50076	DNAJ_2	coord: 107..171 score: 21.103
IPR001623	DnaJ domain	CDD	cd06257	DnaJ	coord: 107..160 e-value: 3.88538E-18 score: 76.4301
IPR001623	DnaJ domain	SUPERFAMILY	46565	Chaperone J-domain	coord: 102..214
IPR011990	Tetratricopeptide-like helical domain	GENE3D	1.25.40.10		coord: 1..108 e-value: 0.19 score: 10.6
IPR015399	Domain of unknown function DUF1977, DnaJ-like	PFAM	PF09320	DUF1977	coord: 269..366 e-value: 4.6E-21 score: 74.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 49..96
IPR018253	DnaJ domain, conserved site	PROSITE	PS00636	DNAJ_1	coord: 148..167

Blast

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BLAST of TCONS_00000001-protein vs. Swiss-Prot (Human)
Match: DJB12 (DnaJ homolog subfamily B member 12 OS=Homo sapiens GN=DNAJB12 PE=1 SV=4)

HSP 1 Score: 257.299 bits (656), Expect = 6.577e-83
Identity = 142/383 (37.08%), Postives = 212/383 (55.35%), Query Frame = 0

Query:    1 MEGNKDEALKCFQFAIKFLDSGHVEKAKKFAEKSIRLYPTTIAEELLGKIN------SDQASPNGSAGSHDHVRRRRRTNSGRKEEEAKAETKEKNYTPEQVEDVEKIKKCKDFYEVLSVSKSPSEADLKKSYRKLALKFHPDKNQAPGAAEAFKRIAAAFETLGDPEKKRKYDTYGENAGPTTR--RTRRNYHEEEFEDISPEDIFNMFFGGGFPDGRVHVRRGRRGQQTYFRQNTHSHNNNHHQNENVSSLYPLVQILPVLLIILFSMLSSFLIPEPIFSF--QPTSQYRYPMTTFKLGIKYYVKDRHVRQ-KHEDYNSIELKIEREFIETLQVRCYRERQYKAELRQQGHMWGSRELLEKADNYHPESCDKLKELQGRVH 372
            ME NKDEA +C   A+K + S   ++A +F EK+ RLYPT     L+  +N       DQ  P  +  +H   R+   T++     EA  E+  K YT EQV  V+++K+CKD+YE+L VS+  S+ DLKK+YR+LALKFHPDKN APGA EAFK I  A+  L +PEK+++YD +G++     R      ++H     DISPED+FNMFFGGGFP   VHV    R + TY          +   N+    L   VQ++P+L++IL S LS  ++  P +S   +P+  + +   T  LG+ YYV D    +       ++E  +E ++I  L+  C++E+Q    L  +   +G  ++  +A      SC +L E+Q  +H
Sbjct:    1 MESNKDEAERCISIALKAIQSNQPDRALRFLEKAQRLYPTPRVRALIESLNQKPQTAGDQPPPTDT--THATHRKAGGTDAPSANGEAGGEST-KGYTAEQVAAVKRVKQCKDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAPGATEAFKAIGTAYAVLSNPEKRKQYDQFGDDKSQAARHGHGHGDFHRGFEADISPEDLFNMFFGGGFPSSNVHVYSNGRMRYTY------QQRQDRRDNQGDGGLGVFVQLMPILILILVSALSQLMVSSPPYSLSPRPSVGHIHRRVTDHLGVVYYVGDTFSEEYTGSSLKTVERNVEDDYIANLRNNCWKEKQQSEGLLYRARYFGDTDMYHRAQKMGTPSCSRLSEVQASLH 374

The following BLAST results are available for this feature:

BLAST of TCONS_00000001-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00000001-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1

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Match Name	E-value	Identity	Description
DJB12	6.577e-83	37.08	DnaJ homolog subfamily B member 12 OS=Homo sapiens...	[more]

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TCONS_00000001-protein (polypeptide) - C. hemisphaerica

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