XLOC_045868 (gene) - C. hemisphaerica

Overview


Name	XLOC_045868
Unique Name	XLOC_045868
Type	gene
Organism	Clytia hemisphaerica (Jellyfish)

Sequence

The following sequences are available for this feature:

gene from alignment at scaffold_99:6120..15632+

gene from alignment at scaffold_99:6120..15632+

Legend: gene

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_045868 ID=XLOC_045868|Name=XLOC_045868|organism=Clytia hemisphaerica|type=gene|length=9513bp|location=Sequence derived from alignment at scaffold_99:6120..15632+ (Clytia hemisphaerica)
TTTCAGCATTACATCTAAACCTTATCCAAAAAATAAAGTACACTACTTGC
TACAAGTGATCAAAATGAGCCAAGACATTGATAATTCTCAGCAGCAATTG
TTTTCTGAGGTGAGTTAGATTATTTTAAACCAAAGATCTTGCCTGGATCT
TTCACAGTTAGTTATCCATCGCTAGAGAGATTAGTTTCatggttttattt
ttcttattttttctcagacaacaattttgaaaaatgaccagTAGCAGTAA
TTTACTTACTTTACTTGTTGACCTAAAATATGAAAAGAACTTATCTTTCT
TTTTAGGTGGTGGCAAAAAGCCAATCTGAAGTTATTACTAATTCCCAAGA
AAAAGCTGAAGATCAAACAAAGTCAAAAGATAAAAGGTTCAAATaagttt
aattttaaaatatatgattttcagtgctgtatttgttttgttggtAATTG
AAGTCCACATAGTTGTAAGGAGTAGGACCATTCCAGGGCCTAGTAACTAA
AGAAGAACTAGACATTTCCCTTTGGGAAAAAGGTTTATGTAAAAATGTTA
CGTTTAATTCATTAAGCACATTTTATAACTAACTTATTCATTATAGAAAA
GACCACTGGTTATTTGCTGTTAGAGAGGTATACTTTTGATAGACAttgta
tttcattttcattcttttCATTCGTTTGAATTGTTCATTAAAGAATATTG
TTAGCTTTTCTTGAGACACTccaataattttgaaaacagACCAACCAAAA
TGCACCAGAAAGAAATTCTCATAGGCTTTTCAACTAAtggctattttgaa
aaaaaattttatttgattaatTCTTTACATATTGTCTCGAAATGGGCAGA
ATAGTGAAAGTTTTTTATGTCTGCTCTTGGTGTTATTTTTGGGCCTGTTT
AGTGATATTTGCAGGTTTTGACGTGTTTATAACCTCTATTAGCGTAAGCT
CAAAATTGGGCAATGGCAAATGAAGGGCCGGCGTTTACTTTGGGCTGGAG
TAAGGTAGGCGATAAATTACACTTGACAGGAATAATATTTAATTTGTTAA
CTTTTGCTATAGGGTGCACCACCAAAagagaaacaaaagaaatcactCAT
TCAAAACGTGGAAGAGGTGACCGAAGCTTTCAATGAGCTCGCCAAAAATA
TTCGAGAACATCAGGAGAGTATTTCAAATGTGCATGGAGTAGGGACTATA
CATACTGATTTTGGAACGTTGGGTACTGATGATGTCAAGACTCTCTTCAA
AGATGATTGTCCacaattcaaaacttttttcagtGACGACTTTTTCAGAA
GtgagttttatttaattttctggCTAAAATAAAGTAAGTCATTTGAAGGA
ATGTGTATTCCTTTTTAGTTCAAAAGCGTAGGAAAGAACACTGGACTAAT
TTTACCATAATTACAAGAATATTTTAACACTCTGCTGTGTATGCTACAGT
TCTTTTACATTGTTACCCCTTCAAACCCGAGTGACGTGTATACACGCTCC
AAATTAGCAAATATACCGTGTTCCAAGGCTAAAACGCTttaccacttgat
ttaaaaggtCGTAACAAGCTTTCCTGTCATGTCAGTTTGAAGTTTtggat
ttcaaattaaaaaatttcacacttaaaaaaaaaaacgttgtgCACTGGAA
AGGTTAATAAAAAACCAGTTTATGTTATTATCGACTGACTAATATTTCTA
CCATTTTAATTATTTCCAATAATAGCTAATATCGAAGTTCTGAAGCCGAA
AATGACGGAAGTAGACCTCTCATCGTGGTtgcaaccacaacaacaacaag
gcTCACGTCTCCGTCTACAACGTAAAGCCAAAACAAAAGAGAAACGTTAC
GCTCAACTCATATCTGATGACGACGATGATGATTTTGAAGAAGTAACATC
AagtaaaaagagaaagaaaactgaaaataaaaattataacatCAATAATA
AAGCTATTGTCCAGCATGAGGATGGTTGCATGAGTATTGATATTATTACc
gatgatgatgaagatgaaaatcaGCAAACAAACACCAAAAGTAAAGATGA
TCAGAACAGCATTGGATCAACTTTgacagaaaaaatcaagaatgtAGTCA
AGAGACCAATGCAAACCATCACTGACATATGGAATAAGAAATCAGACACT
AATAACAATGGTCAAAGTCACAATGATGGCGAAGGAAGTCAAAATAGTAT
TCAAAGCAATTATAGGTATCCCATTTCAGGATTACTCTCTTAGGTATATA
ATGAAAAGccggtcaaaaattaatgactAAAATCAGGCTGTtcagagaaa
agaaaagaaattttattttaactgcCCAAAACACTTCTTCAAACTGTGAG
ACAGGCGTGGTTCTGAATTATACCAAAAGAAGTTTTCCAtattttgttaa
gttacgtaacttccgccattatggaagcaaacttTCGATTTGTGTAAGGA
ATCATCTCCTCacattcgaacgtttgcttccgtAATGGCGAGAGTTACGG
CCCCTTAGAATTTAAGGGGCCCCAGCggcttgcgtgaatgcgtgaatggg
ctttttcacttgtgtgaatgcgtgaaaaaaaaaatgaatgcgtgaatgcg
tgaattggcaAGCTTTGCATGAAcatgaattgcgaaaaaacattgcgtga
atgcgtaaatttgggggaaaaaattgcgtgattgcgtgaatagaaggtcc
gctggggggggggtcacTTAACAAACATGGTAAACCTCTATACATGAACA
TGGTTGAAACTTTTGATTCTTGATTCATTCATCATTTCTCTAGTccaaca
aaatcaaagaaagaaacgGAAGATAAAGTAGAATGTCCAATGTGTGCCAA
GAAGTTCCCAACGAAAGATGTCATGGACCATGCGTTTTATTGTGATGGTG
TCAAGGAAACTCGATCAACAAGGTGAGTTTTGTGTGATGACAGCTCGTGC
AATCTCTTGTTTTGTCCAAGCATTTACCTCAAGTCTTTCGGTGAAAAATG
TCTTGAAACTTTTGTGAGCTAAGACCAATACAGGCGAAGCTGAAGACAGT
TAAAACTCTTTCTCTTCAAAGCCAAACTCATTCGCACTGTTGAATTACAA
TCTCCCTTTTTGGTCTAAATCTATTGTCTCCGCCAAAACCCGCCCAGTTT
TGTTTAAACCTAGAAATAGTtccaaaatctttcaaagtGAGTGTTAATGG
TTGTACCAAGAGTTGTACCAATGAGTTTCAAGTGAAACATTTGATTTAGT
TTCATTAAATTTCTATTAATTTTCTATTCCCTCTCCTTATGAATCCGCAA
TCTAAAATATTTAAGAGAACTGATCAAATACCatcttttttcatttgaca
GGTCGAGCTCCAACGGGAACGGTAATTATTAATTTGTTGAATCATCAGac
atttttaagtatttttttaagttttggtcaactaatagccgggggggttg
gaataagcaggggggttggtaaaaatctcaaaatttaataagcggggggg
ggggggggggNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNggggggggggctgtttatttggcacctaa
gagtactgaTCTTAACAGATGATTTTCAGCCCACTgttactttttataag
aaactaggCGTAATGAGAACATTTAAATCTGGCCCTTAATCTTGTTTGCA
AGGGTTTGTActcaaaattgacgtcatcgtAAAATCCCGGAGGGGGGGgg
actcatatgatctggcctacgtcatgtgccgcgcttaagggtgggatTTT
TCAgtatcccaaaatgcactgtaaaggacatgtttttctttttataagca
agtgtatgccccttggtcaggctcgtatATGCATAAGTTcccaaagcatc
caggcataggttatgcttattatatgctcatgaatcatgcttatgattca
cctcgagccaagtttttagtgaaatttacctaactcgagaaattaatcct
taaaaacagtgttttcagtgtttttcagccagaaacagctgttttgtcca
gtttttgcgctttcggaagctcaatatctcgagttaggtacNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNtaggtactgaaatcacctatactcgcaatata
tcactaatcttaattttttgagagctttccaaaaatatacaacaggtctc
cattttctcaagctaaaattctcattaatttttcaccctatgttTTTGCc
agagaccgtcgtatttgtccgaaaatcacaccaaagtgtccgaaaaaaaa
ttggcacccaagttattttgattcccctaccacttagctttccaaaaatg
tataacaagtgctttgactaaaaaaatcgagcgattttacaaatttcccc
ctactatcacctcgagccaagtttttagtggaatttcagaaattttgaaa
aaatttgttcagattttgggagcagtggaatgtaggaaaccgtggaaagt
cttttttttttacttaacctctgccaaacctttttaaacagataaaaatg
acaactggaaaaatatttcaggctgacacaTGGTTATGTTAAgtttagga
attctgcaaatgtgagccttcatatgcttatatgcgttatgcttataaaa
agaaaaacatgtccAGTGCACTCACTGTATAAGGGTTGGgttaaatcaag
agaaaatgcacagaaagggtaccttttcaacCATATTGAActgtactgta
agggtacgattttgaaaagcagattttgcgcggcacatacagTCGTTAAA
ATtccttcccttaaggtaccacAAAATGAGTCAGAAAGGTCACAGATTTA
TCGAATCGAATACGTTTTTTTATTGGTGGCTCTAGCAGGCTCTagggatt
ttactgatttNNtgggttattttttcttatttggcacgccctcaaagaga
gcaattaatcgttaattgcatcctgtagagagcaattaatcgttaatcac
actctccaatgcagTATTTAGAAAGAGGATTAGAAAGAGGatagtctaac
ttaaattttgcggtataactttttaagtttggtcaagtaGTTGTCAGTTT
GTCAAAAACTGACTATGTTGTAAACGAAAActgcttttaaaagtatttta
acaATTAATTATGTCGTAAAagtcgttaaataagtcaaataCTGNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcccccc
cccccctccactTTTTTCGGGGAAAAATATCTTGAAACTTTTGCGAGTTA
AAACCAATACAGACTTAGCTGAAGACAGTTAAAACTTATCCAGTAGCCTC
TTTTTCGTCATAGCTAAACTCGTTCGGACTGTTGAATTACACTCTCCCTT
TTTTGGTTTGAATCCATTGTCTCCGCCAAAGCCCGCCCAGTTTTGTTTAA
AcacaaaaatagttttaaaaaaattcaaagtgagGTTTAGTGGTTGTAGT
ACCAAGAGCTGTTACAATGAGTTTCAAGGGAAATATTGGATTTAGTTTCA
TTAAATTTCTATTAATTTTATATTCCTTCTACATGAATCCACAATCTAGA
ATATTTAAGAGAACTGATCAAAtacctttttgttttgttttaacaGGTCG
AGCTCCAACGGGAACGGTAATAATGATTAATTAGTTGAATCATCAgacat
ttttgagtatttttaagttttgatcAATTGCGGTTTTAATATGTACTAAA
GcctttgtttcaataaaaatcttttatGGGTATTAATTTGACATATGAGA
AAGTCCCGAATGttttaatacacgtttttttttttaagaaactagtttta
ccaagcagcctcaatgtttcttaagaaatcagccttttgagccttaaatg
tttcttacatgtttctaaactNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTCAGCCT
CAgtatgtttcttagatgtttcttagtttttaggcattctgagcctcatg
tttcttaaaagtgtgtttcttaaaaaaaaaaaacgtgtaaccaaTATGAT
CATTTCTAAAAGCCATAAGATTTACTCGACTTACTACAAGTTCATGGCTA
AATCAACATTATGTCAATTAAGTTTTCTAAAAGCTATACCATGGTTTCAT
TCATTTCAGCTTCAACGGGGGACTACCAAAACTGGGTGggtgcttgtcac
tcgttaaaTGAAAAACCTGCTAGCAGTTCTGGAGCGTCAAATTCCAAGAT
ACCAGTGGAACTACCtgaattttctggaaaaaagaagaaaaaaccatCAG
AAAATTCGTTCCGTGGACCAAAACAACAATTTGCAGAACCGGCACCTCAA
CACCCTTATACTACAAACACTTCAAATGTTTTTACAAAGTTAAAAGATGA
CGGACCCAAAGAACGAAACCCAACATTAGACGACGGTTTTGGTGACAGTC
AAGAGGATATTATAGCCGGTTATACGACTGTCCGCCATCGAAAACCAAAT
AGAACATACGGGCGTGGTGGTAGGCGGAAGAACTATTTCGATCATGAGAA
TAGTCAAGGAGACGGTGGGACAATAAAATGCGCACGATGTAGTTTATCTG
TTCCAGAGGAGAGATATAAAGAACATACGGACAATTGTCTTAATGAATCC
ACTCTCTCATAAGATTCTTGTTGTTTATTCAACCCCGTTGCGAACCCTAT
AATTAGTAAGTGAGAACAAATCGCTGTCATACACAGTGAAATCTGACATT
TCTTTACCGACGTCATTCAAGTACAGTTGTAATTATGACCTCAAACTGAG
ATGAAAATACGTCACTGGAAATGAACCAGTTGAAATGAtttattcagttt
caaaatatattatttaaaaTCTTCTGTTCGTATGCAGCATTTTCTTTGAT
AGTCGATAATGTTGGAAAGTAAGGGTAGTGGAAGGTTTACCTCTTTTTGT
CGTGTTTTGGTTATTCACTCTTCTTTCACATTTCACACTGtaaatattat
attttcttCTACGTAGCTTTTGATATATATTCAcaacgaaaaaaagaaat
ttttaaagaccAC

Gene-mRNA-Prot

The following transcript feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
TCONS_00073850	TCONS_00073850	Clytia hemisphaerica	transcript
TCONS_00073851	TCONS_00073851	Clytia hemisphaerica	transcript

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
TCONS_00073851-protein	TCONS_00073851-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_99	supercontig	scaffold_99:6120..15632 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
24.56	22.29	10.36	9.76	20.01	14.86	16.13	17.58	13.86	12.09	13.59	11.7	10.72	11.92	12.4	12.86	10.72	12.5	11.37	8.22	10.58	9.28	28.97	23.79	23.14	23.65	7.34	6.14	21	22.35

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XLOC_045868 (gene) - C. hemisphaerica