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XLOC_045868 (gene) - C. hemisphaerica

Overview
NameXLOC_045868
Unique NameXLOC_045868
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_99:6120..15632+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_045868 ID=XLOC_045868|Name=XLOC_045868|organism=Clytia hemisphaerica|type=gene|length=9513bp|location=Sequence derived from alignment at scaffold_99:6120..15632+ (Clytia hemisphaerica)
TTTCAGCATTACATCTAAACCTTATCCAAAAAATAAAGTACACTACTTGC TACAAGTGATCAAAATGAGCCAAGACATTGATAATTCTCAGCAGCAATTG TTTTCTGAGGTGAGTTAGATTATTTTAAACCAAAGATCTTGCCTGGATCT TTCACAGTTAGTTATCCATCGCTAGAGAGATTAGTTTCatggttttattt ttcttattttttctcagacaacaattttgaaaaatgaccagTAGCAGTAA TTTACTTACTTTACTTGTTGACCTAAAATATGAAAAGAACTTATCTTTCT TTTTAGGTGGTGGCAAAAAGCCAATCTGAAGTTATTACTAATTCCCAAGA AAAAGCTGAAGATCAAACAAAGTCAAAAGATAAAAGGTTCAAATaagttt aattttaaaatatatgattttcagtgctgtatttgttttgttggtAATTG AAGTCCACATAGTTGTAAGGAGTAGGACCATTCCAGGGCCTAGTAACTAA AGAAGAACTAGACATTTCCCTTTGGGAAAAAGGTTTATGTAAAAATGTTA CGTTTAATTCATTAAGCACATTTTATAACTAACTTATTCATTATAGAAAA GACCACTGGTTATTTGCTGTTAGAGAGGTATACTTTTGATAGACAttgta tttcattttcattcttttCATTCGTTTGAATTGTTCATTAAAGAATATTG TTAGCTTTTCTTGAGACACTccaataattttgaaaacagACCAACCAAAA TGCACCAGAAAGAAATTCTCATAGGCTTTTCAACTAAtggctattttgaa aaaaaattttatttgattaatTCTTTACATATTGTCTCGAAATGGGCAGA ATAGTGAAAGTTTTTTATGTCTGCTCTTGGTGTTATTTTTGGGCCTGTTT AGTGATATTTGCAGGTTTTGACGTGTTTATAACCTCTATTAGCGTAAGCT CAAAATTGGGCAATGGCAAATGAAGGGCCGGCGTTTACTTTGGGCTGGAG TAAGGTAGGCGATAAATTACACTTGACAGGAATAATATTTAATTTGTTAA CTTTTGCTATAGGGTGCACCACCAAAagagaaacaaaagaaatcactCAT TCAAAACGTGGAAGAGGTGACCGAAGCTTTCAATGAGCTCGCCAAAAATA TTCGAGAACATCAGGAGAGTATTTCAAATGTGCATGGAGTAGGGACTATA CATACTGATTTTGGAACGTTGGGTACTGATGATGTCAAGACTCTCTTCAA AGATGATTGTCCacaattcaaaacttttttcagtGACGACTTTTTCAGAA GtgagttttatttaattttctggCTAAAATAAAGTAAGTCATTTGAAGGA ATGTGTATTCCTTTTTAGTTCAAAAGCGTAGGAAAGAACACTGGACTAAT TTTACCATAATTACAAGAATATTTTAACACTCTGCTGTGTATGCTACAGT TCTTTTACATTGTTACCCCTTCAAACCCGAGTGACGTGTATACACGCTCC AAATTAGCAAATATACCGTGTTCCAAGGCTAAAACGCTttaccacttgat ttaaaaggtCGTAACAAGCTTTCCTGTCATGTCAGTTTGAAGTTTtggat ttcaaattaaaaaatttcacacttaaaaaaaaaaacgttgtgCACTGGAA AGGTTAATAAAAAACCAGTTTATGTTATTATCGACTGACTAATATTTCTA CCATTTTAATTATTTCCAATAATAGCTAATATCGAAGTTCTGAAGCCGAA AATGACGGAAGTAGACCTCTCATCGTGGTtgcaaccacaacaacaacaag gcTCACGTCTCCGTCTACAACGTAAAGCCAAAACAAAAGAGAAACGTTAC GCTCAACTCATATCTGATGACGACGATGATGATTTTGAAGAAGTAACATC AagtaaaaagagaaagaaaactgaaaataaaaattataacatCAATAATA AAGCTATTGTCCAGCATGAGGATGGTTGCATGAGTATTGATATTATTACc gatgatgatgaagatgaaaatcaGCAAACAAACACCAAAAGTAAAGATGA TCAGAACAGCATTGGATCAACTTTgacagaaaaaatcaagaatgtAGTCA AGAGACCAATGCAAACCATCACTGACATATGGAATAAGAAATCAGACACT AATAACAATGGTCAAAGTCACAATGATGGCGAAGGAAGTCAAAATAGTAT TCAAAGCAATTATAGGTATCCCATTTCAGGATTACTCTCTTAGGTATATA ATGAAAAGccggtcaaaaattaatgactAAAATCAGGCTGTtcagagaaa agaaaagaaattttattttaactgcCCAAAACACTTCTTCAAACTGTGAG ACAGGCGTGGTTCTGAATTATACCAAAAGAAGTTTTCCAtattttgttaa gttacgtaacttccgccattatggaagcaaacttTCGATTTGTGTAAGGA ATCATCTCCTCacattcgaacgtttgcttccgtAATGGCGAGAGTTACGG CCCCTTAGAATTTAAGGGGCCCCAGCggcttgcgtgaatgcgtgaatggg ctttttcacttgtgtgaatgcgtgaaaaaaaaaatgaatgcgtgaatgcg tgaattggcaAGCTTTGCATGAAcatgaattgcgaaaaaacattgcgtga atgcgtaaatttgggggaaaaaattgcgtgattgcgtgaatagaaggtcc gctggggggggggtcacTTAACAAACATGGTAAACCTCTATACATGAACA TGGTTGAAACTTTTGATTCTTGATTCATTCATCATTTCTCTAGTccaaca aaatcaaagaaagaaacgGAAGATAAAGTAGAATGTCCAATGTGTGCCAA GAAGTTCCCAACGAAAGATGTCATGGACCATGCGTTTTATTGTGATGGTG TCAAGGAAACTCGATCAACAAGGTGAGTTTTGTGTGATGACAGCTCGTGC AATCTCTTGTTTTGTCCAAGCATTTACCTCAAGTCTTTCGGTGAAAAATG TCTTGAAACTTTTGTGAGCTAAGACCAATACAGGCGAAGCTGAAGACAGT TAAAACTCTTTCTCTTCAAAGCCAAACTCATTCGCACTGTTGAATTACAA TCTCCCTTTTTGGTCTAAATCTATTGTCTCCGCCAAAACCCGCCCAGTTT TGTTTAAACCTAGAAATAGTtccaaaatctttcaaagtGAGTGTTAATGG TTGTACCAAGAGTTGTACCAATGAGTTTCAAGTGAAACATTTGATTTAGT TTCATTAAATTTCTATTAATTTTCTATTCCCTCTCCTTATGAATCCGCAA TCTAAAATATTTAAGAGAACTGATCAAATACCatcttttttcatttgaca GGTCGAGCTCCAACGGGAACGGTAATTATTAATTTGTTGAATCATCAGac atttttaagtatttttttaagttttggtcaactaatagccgggggggttg gaataagcaggggggttggtaaaaatctcaaaatttaataagcggggggg ggggggggggNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNggggggggggctgtttatttggcacctaa gagtactgaTCTTAACAGATGATTTTCAGCCCACTgttactttttataag aaactaggCGTAATGAGAACATTTAAATCTGGCCCTTAATCTTGTTTGCA AGGGTTTGTActcaaaattgacgtcatcgtAAAATCCCGGAGGGGGGGgg actcatatgatctggcctacgtcatgtgccgcgcttaagggtgggatTTT TCAgtatcccaaaatgcactgtaaaggacatgtttttctttttataagca agtgtatgccccttggtcaggctcgtatATGCATAAGTTcccaaagcatc caggcataggttatgcttattatatgctcatgaatcatgcttatgattca cctcgagccaagtttttagtgaaatttacctaactcgagaaattaatcct taaaaacagtgttttcagtgtttttcagccagaaacagctgttttgtcca gtttttgcgctttcggaagctcaatatctcgagttaggtacNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNtaggtactgaaatcacctatactcgcaatata tcactaatcttaattttttgagagctttccaaaaatatacaacaggtctc cattttctcaagctaaaattctcattaatttttcaccctatgttTTTGCc agagaccgtcgtatttgtccgaaaatcacaccaaagtgtccgaaaaaaaa ttggcacccaagttattttgattcccctaccacttagctttccaaaaatg tataacaagtgctttgactaaaaaaatcgagcgattttacaaatttcccc ctactatcacctcgagccaagtttttagtggaatttcagaaattttgaaa aaatttgttcagattttgggagcagtggaatgtaggaaaccgtggaaagt cttttttttttacttaacctctgccaaacctttttaaacagataaaaatg acaactggaaaaatatttcaggctgacacaTGGTTATGTTAAgtttagga attctgcaaatgtgagccttcatatgcttatatgcgttatgcttataaaa agaaaaacatgtccAGTGCACTCACTGTATAAGGGTTGGgttaaatcaag agaaaatgcacagaaagggtaccttttcaacCATATTGAActgtactgta agggtacgattttgaaaagcagattttgcgcggcacatacagTCGTTAAA ATtccttcccttaaggtaccacAAAATGAGTCAGAAAGGTCACAGATTTA TCGAATCGAATACGTTTTTTTATTGGTGGCTCTAGCAGGCTCTagggatt ttactgatttNNtgggttattttttcttatttggcacgccctcaaagaga gcaattaatcgttaattgcatcctgtagagagcaattaatcgttaatcac actctccaatgcagTATTTAGAAAGAGGATTAGAAAGAGGatagtctaac ttaaattttgcggtataactttttaagtttggtcaagtaGTTGTCAGTTT GTCAAAAACTGACTATGTTGTAAACGAAAActgcttttaaaagtatttta acaATTAATTATGTCGTAAAagtcgttaaataagtcaaataCTGNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcccccc cccccctccactTTTTTCGGGGAAAAATATCTTGAAACTTTTGCGAGTTA AAACCAATACAGACTTAGCTGAAGACAGTTAAAACTTATCCAGTAGCCTC TTTTTCGTCATAGCTAAACTCGTTCGGACTGTTGAATTACACTCTCCCTT TTTTGGTTTGAATCCATTGTCTCCGCCAAAGCCCGCCCAGTTTTGTTTAA AcacaaaaatagttttaaaaaaattcaaagtgagGTTTAGTGGTTGTAGT ACCAAGAGCTGTTACAATGAGTTTCAAGGGAAATATTGGATTTAGTTTCA TTAAATTTCTATTAATTTTATATTCCTTCTACATGAATCCACAATCTAGA ATATTTAAGAGAACTGATCAAAtacctttttgttttgttttaacaGGTCG AGCTCCAACGGGAACGGTAATAATGATTAATTAGTTGAATCATCAgacat ttttgagtatttttaagttttgatcAATTGCGGTTTTAATATGTACTAAA GcctttgtttcaataaaaatcttttatGGGTATTAATTTGACATATGAGA AAGTCCCGAATGttttaatacacgtttttttttttaagaaactagtttta ccaagcagcctcaatgtttcttaagaaatcagccttttgagccttaaatg tttcttacatgtttctaaactNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTCAGCCT CAgtatgtttcttagatgtttcttagtttttaggcattctgagcctcatg tttcttaaaagtgtgtttcttaaaaaaaaaaaacgtgtaaccaaTATGAT CATTTCTAAAAGCCATAAGATTTACTCGACTTACTACAAGTTCATGGCTA AATCAACATTATGTCAATTAAGTTTTCTAAAAGCTATACCATGGTTTCAT TCATTTCAGCTTCAACGGGGGACTACCAAAACTGGGTGggtgcttgtcac tcgttaaaTGAAAAACCTGCTAGCAGTTCTGGAGCGTCAAATTCCAAGAT ACCAGTGGAACTACCtgaattttctggaaaaaagaagaaaaaaccatCAG AAAATTCGTTCCGTGGACCAAAACAACAATTTGCAGAACCGGCACCTCAA CACCCTTATACTACAAACACTTCAAATGTTTTTACAAAGTTAAAAGATGA CGGACCCAAAGAACGAAACCCAACATTAGACGACGGTTTTGGTGACAGTC AAGAGGATATTATAGCCGGTTATACGACTGTCCGCCATCGAAAACCAAAT AGAACATACGGGCGTGGTGGTAGGCGGAAGAACTATTTCGATCATGAGAA TAGTCAAGGAGACGGTGGGACAATAAAATGCGCACGATGTAGTTTATCTG TTCCAGAGGAGAGATATAAAGAACATACGGACAATTGTCTTAATGAATCC ACTCTCTCATAAGATTCTTGTTGTTTATTCAACCCCGTTGCGAACCCTAT AATTAGTAAGTGAGAACAAATCGCTGTCATACACAGTGAAATCTGACATT TCTTTACCGACGTCATTCAAGTACAGTTGTAATTATGACCTCAAACTGAG ATGAAAATACGTCACTGGAAATGAACCAGTTGAAATGAtttattcagttt caaaatatattatttaaaaTCTTCTGTTCGTATGCAGCATTTTCTTTGAT AGTCGATAATGTTGGAAAGTAAGGGTAGTGGAAGGTTTACCTCTTTTTGT CGTGTTTTGGTTATTCACTCTTCTTTCACATTTCACACTGtaaatattat attttcttCTACGTAGCTTTTGATATATATTCAcaacgaaaaaaagaaat ttttaaagaccAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00073850TCONS_00073850Clytia hemisphaericatranscript
TCONS_00073851TCONS_00073851Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00073851-proteinTCONS_00073851-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_99supercontigscaffold_99:6120..15632 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
24.56 22.29 10.36 9.76 20.01 14.86 16.13 17.58 13.86 12.09 13.59 11.7 10.72 11.92 12.4 12.86 10.72 12.5 11.37 8.22 10.58 9.28 28.97 23.79 23.14 23.65 7.34 6.14 21 22.35