XLOC_045845 (gene) - C. hemisphaerica

Overview
NameXLOC_045845
Unique NameXLOC_045845
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_98:78449..85652-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_045845 ID=XLOC_045845|Name=XLOC_045845|organism=Clytia hemisphaerica|type=gene|length=7204bp|location=Sequence derived from alignment at scaffold_98:78449..85652- (Clytia hemisphaerica)
CCTGGAATTACTCAATTTTAAGCAATATCAAAGTAGTGAAAATTGGGTAT AAAGCCTTAAATTGTTCTTATTTTTTGGCGATTTGGTTGAGCCTCATTGT TCTTATATAGTTGCTCACTTTACTGAGATCCTTAACTATACTTTAATATA TCATATGAAAAGATGCAACGAATCTTTCGAAATACCTAGCTTGGCCCGAC GACCTCAACTCAAACACGCTGTTTTGATAAAGAGGTCTTCTTCATTGAGC GTCACATGTGCGTTTTGAAGAAGTGACTTGGAATGAGATTAGGAAATCAT CTTTGAAGAAAAGAATGCAACGTTTGAAAGAGAAACTGTTTGGATGACGG AAGTGTGTGATCTTGTGTTCCACTTAAACACTACTTGAGTGATGTTAATT AAAGAGAGAAAAGATTTTGATACAAACGCTCTGTTGATTGTTCAGAGGAA GAAAGAAAATTTCAAAATCGTTTCATTGATTGATTGAACAAGAAATATTG TAGTCGTGTCTAGAGGTTATATGAAAGATTAATTTTTATATCTTTTTGGT TGAGTAGTTCTGTAGTGAGAGAGGAGGAAAATTTCAGTTGTGGTTTTTGA TGATGACGAGCTCTATTTGTTTTTTGTATGTTTTCTCTTTTGATGAGACC CTCCAAATGTTTGAAAGAGATCAGAAGAGATAAGCGATATTTGAAAAGTT ATAAGGAGATGAGATTCAAAAGTTGTGTCGTTCATTTGAATATTGTTGTA TGATCACTATGTGTCGATTAAATTTCATGTTTTTATTTGATTTCCGTTTT CGATTTTCTCAGAGTTGTATCAAGTTCGTATTGAACAGTATTTCCAGGTA TTCTGCATACTCAGCATCAAAATTTCGCATTTGTCAAAATTGCGTATTCA ATATTTTCGTGGTTTGATCAAATTCTAGAAAAGAAACATGTAAACTAATG AACAAACAAACAAAACGAAACTTTTTTGGTTGAGCAAGACACACAGATTT TTGAATAAGCGAGACAAATGGGTTACATGATCAAAGACAGCAATATGAAT GTTTGCTCTTCATCCATGAACGGCACAAATGTTCATATCAAGCAAGGTTA CCTGCATATCAAGCGTGAACGCTCATCTTCGCCCGTCACGACGCGCGTTC TTTTCAAGGTGAGATTGAAGTTGTTGTTTGTTTTGGTAATTTTTCACTAG CGTTACAACTAAGACCGCATAATTGGGGCGATGTTTTTAACAGGACTTCC TTGTCGAAGCTTTTAAACCTCTAAATGTAGATTCTTAAATCTTGTTAAAA TATTTAGACCCGATCTCTTAAATAACCTGGGCTTATCTCCTTCTTTTCTG ATAGGCATGGCAGCAAGCATATTTTATCTTACGCCGTGATCCTTACGTCA TCGAAGAATACAAGGACGCCACGTTAAAGGCTCTACGTCAACGTCACTTC TTACCGTCAATCAAGCACGCCGGTATCATACGGACTTCGAAATCGCAACA ATATGCGTTCGAAGTGGTCGTCAAAGATGATATCGTTTTGTTGTTTGGAT GTGAGAATCAAATCTTGAGAGAAGAATGGATTCAATCCTTCATTGATGTC AAGAGAGTTATCGATGAGAAAGAAAAGAAGGAATCACCCGCCCTTCAACG CCCTAAACAACAAACGCAACACCCTATGCTTGAACGCAAAGGTAGTTTAA ATGGTAAGTTCACAGTAGATTTAACGCTATTTTGACCCCATTTTCTTGTT CATTCCTTTAAACCGAATCTATTTTGTCCTCAAAACTTCCTATCGATAAG CTTTTCGACTTCATCGAAAGGCTTGGGAAGAGTAATATTGGGTAGGGCCA GTTGTACTAAATTTGGCCTTTATCAGACTTAATCCATCTTACCTTCAAAT CAGATGGTAAAATCAGATTTCTTAGCGTAGGATGGGAGACAGACTTTGTT GATAAGTTGCACGATCACACTTAAAGTTGTGCAACGTGTTTACAGTATTA CCTCGAGTTGTTTTCAATCTCCAGATAAAAATAATCTTTTTTATCGCCAC ACGTAAGATGGGAAATCAAAAATATAATGCGGTCAACTCACAACTTACGT CATTGTCTCATAAGTTTTTGAAATGATGTGGCCGCAGAATTTTCTCATGT CTCTATAAGTTGGAATTTTAGGAAATATAAGTTTTTAAATGCGTGACAAA CATTAATAAATTTCATATTGATAACATCAGTTTCTATCATACGCCTCGTT GGAATCTTGCAAATTCATCACTTATCTTGAAAATAGACCTGAACTTACCT GATTATTTGTTATTAATGAGACTTCAAGACCTAATCATATTTCTCGATCG TCAAACTAACAATTTTGAACTTTCCCCCGCCTTTTTCGATGTTTACTAGA CGATCTTATCGTCTACACAAGATCACTAAAAGAAGGAATAGTTTAGGAGG CAGAATAAATTTGAAAATGGTGGTTAGCCCGGGGCGGAGTAAGCAGTGGC GGAGGTACTTACAGTGTTTTGTTCCAAAACTCTACCGCCACTATTTTCCC GTAAACCGCCCTCGCGCCCTGACTCTCCGCATATATACTTTCCCGCGTCT ACTGACCTTTAAAACGGACGATAGCATCGTCTAGATGTTTACCTGATATC GAATCACACTTTTCTCTTACAGACACATACCGCGTACGAATTATGGAGAG CTCTCTTTCCATCGCCAACGAATTGGCGGGCGATTATTTTATCACGCTGA CGTCATCGAGAATGTCGCTACTTTCAATCTGTGATTTGAACGAATTGTTG AGTTGGCCAATTAATCACGTGACTTATTACACGCACGCCAAGAATCAAGT CATCCTGATCATGAGCAGGTCGGTTTGGTTTCGGAGTTTTCTTCATTTTC TGTTTTGTCTAAAATTCCTTTGTCTAAGGCTTCGAAAAGTCTAAATAAGT TTGAGTTTATCGACCCAGTGATATTCATATTGGAAGTTTCTCGAAAGCCA AACGTAAATTTCGTGANCCCAGTGATATTCATATTTGAAGTTTCTCGAAA GCCAAACGTAAATTTCGTGATCCAAGCCACGATAAACTTCCAATATGCTT CGAAAAGTATTGTAAGACTCGTGGCAGTAGTTTCGAGACACATCAATACT TTCGAAAACTTATTTTCCATGTAAGCCTGGTGTCACAAGTAATATTTGAT CAGGTTTAAACCATTTCGAAAGAANTAATACTTTCGAAAACTTATTTTCT ATGTAAGCCTGGTGTCACAACTAACATTTAATGAGGTTTAAACCATTTCG AAAGAATAACGCAATAATCCTTCCCTCGAGCCAAGACTCTACTTACTGAT CCCTGGGTGACGTCACTGGTGGCTCATTCTCTTGAAGGAAGTCTTGTTTA CTTTAGAGATTAAGCTTCCTGTAACCTTTCAATGTTGACATTGTATTGTT TTTGGCAAGCCAGAGAACTCATTTCCCCTAGGTTACAATGTCAGTACATA ACTTCTCTTTTGAAGTAAACTGACACAAAGTACCAGTGTTTCGAAATGAT CTTCCAACTATGATTCTTTGAAAAAATCACATACAGTACTTTCCAATAAC GATCACGAGCTAATATATTATATCTTCCATTATCTTCAGATTATGCCATT TTGGAAGTGGCAAGTTGATTTTCGAAAGCAAACAATGCGACTCGTTGATG CGATCTATCGAACTTTTTCATAGCAAGAATCGGGCAGATAGTCCGAAGTT ACGAGCAGGTTCATCTTTTGGAGGATGTTCGGCAAGTTTTTCGTCCGGAT CAGGGTCGCTATCCGATCGTTCACCCTTGCGATTGTCTTGCGATGACGAT ACTGTTTTCGATTCACCCTCCAATCCTATAAATTTCAATTGTGATAAAAT CCAAGAAGAAGCTGGCCGCCCCGAACCAACATCCTACCGCCAAAATACAC ACCCTAAACTAAAACGCAGTGAAAGAAGTGAAGACTCCTTGCTGTGTTTC AAAATCGATCAAAATACACCCCAACAACAATCACCGCCCCAACAGCAATC ACCGCCCTCCATCGATAAACATTTTGCAGAAATAACTTCTGAAGATGGCT ATGTTCTTCCGAACGAACCTGACTGTGATTTCACTGACATCAAACCGACA ATACCTTCTCGACCCGCTTCTCGATCACCGAATTCCTCCGACAACGAGAA CGAAGCTTCGTCTTCGTATCTACAGATCGTCGATAACGAAGATTCATCCG AAGACACAGACGCCAAACGAATGCTTGAGGAAATCAATTCCCAGTTAACT GATCCACAAAACAAACCAGATGTTTTCATTTTAAACGATTTAAGAATTTC CTCACCTATTCAATCACCGAAAATTAAACGAGAAACCAATCGTCGATCAA GCGAACCTCCTAAACCTTTCACTTCGACAAAAGAACACATGAAATTATCG AAGAACGGGAAGAAAGTTAGCAGTTATAGTGTGGATTCCGGCTCTATGAT TAACTTCAACTCTCCACAAACCACTCACTTTAACAAGAAAAGCGCTTTCC CTAAACAACACAGCATCTCACGTGGCAACCATGATTCGGTTTCCGGCAAA GCAGCCACTGTCAATCCTTTTGATTCCGGCTCATTTTTCATGAACCCTAC AACACATTCACAGCAAATGCATGCTTCCCAATCATTCAGCAAATTCAAAC ACAACATGAACTTAAGAAGGAACCAAACTGAATCCGTCCTCTCTAAACCT ATCATGAGTCCGGAACTAGACCGTAACACAAAACCTAAAAAGCTATCGGA CACACCCAAAGCACAACCGGAACTCACCATTCAAACAACGGACGTGGAGG CGCAAGATGGTCCTCCTCCCATCCCTGAACGCATATCACCTACACCTTTA AAAGACGTTTCAAAACGCAAATTATGTCGTTCGCAAAATCTGGATGAGAT CGATACAGATTCAGCCAATGAGGAACCAGAAATGAAAAACACGCTGGCAC CTCCATTACCTCCGAAATCAAAAATTTTATCGTCCACGCGCTCAGCCCCA ATTCCCGCACGTCTAGATGAAAGTGAAATGGAAGGAGGATGTTTACTCAG ATGTTCGAGTGTAGGAACAACGCAACGATGTCAACAAAACGGAGAAATGA CGAGTGAAGAGAACTCTCAAAACTGTTCTTTAGAGGAATCAGCGGAAATG CCGCCAGAAGTTCCACGCCGCTTGCCAACTCTAGTAAGACTTTATTTGAG AAGTGTTTGGAACTTTCAAATTTCAGTCTTAGAACTTTATATCGTAAATT CTTTGGAAGTTTGATATAAATTTTTTTATTCAGGAACTCCTCTAAGAATG CATAATTTTCACTGGCCGATGAAATAATGAATTTGTTTTTGTTTTTGCGA CTTTTTCGCTCACAGGATGTTATTGGTTAACCACTGATTCGGAAAATAAC AATTACAATTGTTAAATTAAGAATTTTTGTGTTTTTCATGATGTTACTTG AAAACTTAAGGCTATTTTAGATATGATCTGATATCCGTTGTATTCGAAAT TTCTAGTTAAAATTCTCAATTTGACAAACAATTTTTGATTCTTTCTTTCT TATAGGCCAAACGTCAGCATTTATCGACTTCAGAAGGCAACCTTCTCAAG AACGGCTTCAACTTCAAACTGTTCCGCAAAGTATCCAACGAAGGCGAAAA AGCGAGGCGTCATCGTTCCTTTCATTCTGTAGAAGAAGATCCAAATGAGA ACAACCTTCCAGCTTCACCGCGTCGCATTACCGTTCATGAGTTCGACCTC CAAGCGCCGATCTGTGATGAAGGACTTTTAACAGAATGCCCTGTTAAACT GAAAGGCTTTAAGAATATTTCTACTGCTTTTCCGAAACCCAAAAAGACTT GAAGACTTCTGGTGGTATCTGAAACAAAAGAGACGGTGTTGCAACTTTGC TTCCTTGCAAGCAACGTCTGGTGATATCCGGGCACGGTAGTTTTCTTACA GAGAAGGAATTTTCAAAGTATTTTAATGACCTATCAACTATCAAAACTTT TGTTAATTTTCTTAATTCTCATTTTTTTTGCTTTCCTTGGATCAGAGTTT GACTTTTAAATGAGTTCATCAACTCGTTTAATTTGATCAGACAAAGCCGT CATCGAAAACTCCAATATTTACGCGTTGATTGCCTGAGAAAGTTTCTGAC AAATTGAAACTTATAAGGAAACTTGCCTCAACAGAAAGTGAAAAAGCTGA TGCTCGATTCTCTACTAATGAGCCAAGCAATTAAAATTAAACGTTAATAC AATTTTGAGATAATAGCTCCATAAAGTTGCAGTCATTAACCTTTTTGATG TTATTTCATATTTTTTCTTCTTTTTTCGGTCAATGCACAAACTTTCATTT TTCGACTTCCTGCATGTATTTTTAAAGTAAAAGTCGTTAAGGACTTTTTT GTTTTCAAAGGAAAGAGGAAGTTGAAAAAGCATGAATAAATTCTCATAGC TCTTTCTACACACGGAACTCAGGAAATCTTGGCGGAAGTTGTTCTTTTTA ATCTTTCACATATAGTCTGCAATGTCAGGTTTTTTGGTCAAAAACTTTTT TAAACTATTGAACCTATCAACCCTTATAACCCTTAATGAGACTGGGTTTG GGTTTACCAGGTAGGATTGAAATCAAATGTCAGATTCTCTCATAGACAAA AAGAGTGTTAACGTCATTACTTCTTGCTAAACTCGACCCAACCCCTTCAT GATGTTTAGGATTGATAGTTATATCGAAATAACTTTCCAAGAAGTTTTAT TTTCTTTCGAGATTGATAATTCTATTCGGTCTATCGAATGCTTTGATGCT ATAAATATATTTTTTGTCATTTCCCGAAACAATTTATCCAAATTATGCAA AAGTTTAGTTTTCTAAAGTTTTCAACTACCTTTTTTTAGTTTTTTACTAA TTTCTAAAAAAACGCTTTTTTATATTTTTGTAAATTTCCCTGTATATAAA ATAGCTGTATATTTGTTATTTGAAAACCATATTTGATAATAATGTATAAA GAAAGAGCTTTCTAAGAAAAAAATGAGCTTGATTCAGTTGATATTTACAT GTTTGAAGAATTTCAAAATTCCAGATATCTGGCGTGAGGATTTTTCTGCT TTACACATTCCTGACATACCAGACAAATTTCATGATTTTTTCCCTTCTTG ACCT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00073824TCONS_00073824Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00073824-proteinTCONS_00073824-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_98supercontigscaffold_98:78449..85652 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.95 1.71 0.87 0.7 9.2 6.91 9.7 10.77 4.25 6.98 3.77 2.58 7.16 7.33 5.09 5.31 9.8 13.63 8.7 8.39 3.16 3.37 4.29 4.62 12.46 7.67 1.85 0.63 0.89 0.7