XLOC_045717 (gene) - C. hemisphaerica

Overview


Name	XLOC_045717
Unique Name	XLOC_045717
Type	gene
Organism	Clytia hemisphaerica (Jellyfish)

Sequence

The following sequences are available for this feature:

gene from alignment at scaffold_96:111147..117565+

gene from alignment at scaffold_96:111147..117565+

Legend: gene

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_045717 ID=XLOC_045717|Name=XLOC_045717|organism=Clytia hemisphaerica|type=gene|length=6419bp|location=Sequence derived from alignment at scaffold_96:111147..117565+ (Clytia hemisphaerica)
NNGATGCTATCTTAATGGGTGGAgctaaaatcactaaaaaaggtTAGTAG
TTATAAATCTAGTACAAACCTTATTCCCATAGCGAATCTTCGTATTTTCC
GCCGGATGGTGTTGGACCCACAGATTTTTAATGCCCGAAGGgatagatgt
cgtgctttaagccatcgcaggcaaaaaaaaagaaaatatcgcaagaaata
tagtttctattgtttttgaaaatccgcgaagcttctgattggttaagcgc
tgaaattctataaTAATGTCATATTACCTAttacctaggtaggatttcct
acctaaccgcggcacacttttcagcaaaagcacgacatataacccttcgg
gctttacaaatcTGTGGGACccaatgaaaacaatcaaaggGTTGTCTAAA
GGTCCCATATTATACCCTTCAATGCATGTGAAATACAAATAAATACACAA
GGGCCTCCTCTTCTACACTCTTCAACCACTTAAACACTCCTGCGTCAAAG
ACCCGGCCCCGACCCCGGCCCCCGCCCCACTTGTAAATTCACCCAAGATT
TCGTCtttggtggaaaaaaatatcctacaatttcagacccaatggTAATT
TGACGTTGATTTCATCCTCACTTGAAATTTAATGTAAATATTGCACTTCA
AAAGATCCCATTAGGGATTCTTTagctgggaacaatagaatttcgatAAA
AATACTGAAGAAAAATCACCTTAAGACAATCCAAAAGAGAATATCCTTCA
AGAATCCAAAACTCTTTATaacaatatcatcttttttccATCAAAGGAGC
ACCAAATTCACCAAAAGGGCAACAAAATTACTACAATACACAAGGAGCCA
GTCACATGCCACCGCAACAACAACAAATGCCACCACACCGAAAGAGAAGT
AGTTCCAATCATCTCCAAGTGAGAAGAGAAGAAGAAGAGGAGGATGTTGA
AGTTTTCGACTCGTTTTTGGACACCAAAATGAACGGTAGTTACGTTATCG
CTGGTGATTTTAATGGTAAGAAACAAACACCATTTATCATGATATTAGAC
Accgtaccagtggataccccttaaaaccacataccccttaaaacccacaa
tgttgcatttttggctttcataactaccagatttaattttatgtggtaTG
TTTCACTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNttttctacaaaacatcactgc
tagggaagacaatcatagacaacgtactttcaacacaaaaagtttcagcc
ttacactccaactaaacaatgagatagagggttccactttttattgtggg
ttttaaggggtatccactggtacttAAGAATTCATAAAAATGAAAGCGAG
TTCGGAAAAAGACTTGATACCAGTAGCGTGGCGGCTCGACAAAATTTTAA
GCAAACTGAGAAGGcaattttagaaatttgggaTCTTGCCGTCTCCTATT
AAACGTAAAATATCCAGAATAAGACCAGAATAGGATTCCAGGCTAATTTT
AATAATCTTTTTCAAAGTATGCCCATCATGTGTCACCTATAAAACAAAGT
AAACATTTTTTGGTACGTTTTCCTCGACAGGAACTTGTTTTAGTGATCCA
GACTTGTGTAAGTTGAACGGGATGACCATATACACTTGGTTGAAGATTGA
TGCAAAAGAATTGGAGAGTACACAAAATGCTTTAGGACGAGATGCTTACA
TATTGAGCACTGGTGGACAATCTAAGAAATCACGAGGTTGGTTTACATTC
AAATATTGCAcgtaaggcgaaaataaaaaaatatagtgtttccggaatgc
agGTAAAGGAAAAAGGCTCTCACGCGGCcggccgaaaaattttttttttg
ctatttttgataacttaagatcattgaaatagagctttaaaaataacttt
tatttacaaacagtatgaagtaagccctggaATACTAATGCATCAACTaa
taacgaacaaaacttgatttacaagcgagaatatctaaccaaacaaCGTT
TGATAGCTTGGACGGTCAACTTGATTTCNCGCTGGTGATTTTAATGGTAA
GAAACAAACACCATTTATCATGATATTAGACTTAGAATTCATAAAAATGA
AAGCGAGTTCGGAAAAAGACTTGATACCAGTCGAGCGTGGCGGCTCGACC
AAAATTTAAGCAAACTGGGAAGACAATTTTAGGATTTTGGGATCTTTCCG
TCCCCTATTAAACGTAAGATATCCAGAATATGACCAGAATAGGATTCCAA
GCTAATTTTAATAATCTTCTTCAAAGTATTTTGGTACGTTTTCCTCGACA
GGAACTTGTTTTAGTGATCCAGACTTGTGTAAGTTGAACGGGATGACCAT
ATACACTTGGTTGAAGATTGATGCAAAAGAATTGGAGAGTACAGAAAATG
CTTTAGGACGAGATGCTTACATATTGAGCACTGGTGGACAATCTAAGAAA
TCGCGAGGTTGGTTTACATTCAAATATTGCAcgtaaggcgaaaataaaaa
aatatagtgtttccggaatgcaggtgaaggaaaaaagctatttttgataa
cttaagatcattgaaatagaactttaaagataacatttatttacaaacag
tatgaagtaagccctgaatactaatgcaTCAACTaataacgaacaaaact
tgatttacaagcgagaatatctaaccaaacgacgtttgatagctttaacg
gtcaacttgattttctttttttcacccggccgctttccggaaacactaca
tttttttattttcgccttacgGATAATTAATTTGGATTGATTTTGTATCA
CGTGATCAGAAGTAATTAGGATAATTCGAAGTTCATTCGGACAACCTAGA
GTTAGATATTTCTCGCCTTGTGCACAATCTCGGTTCGAGCTTGAGAATTC
CTACGAGCTCTACAATTTAATTTACACAATTTTTCTATTTCAGGTTTCGC
TTTCCTATGGTTTCACGGTAAATTTGTCATGGTTATCAGTACCGaaacaa
aacaatggaaattaGAAATACCgaaagataaaataaaacacGATGAGTGG
GTCCagctttcttttgtttggaataCAGACACGTTAACTGGTTATCAAGA
TGGAACCAAAATAGGTAGTACCAAGGGCGTGGCCGCTGAACGTCCGGAAG
TCCAGTTCACTATTATGACTATCGGACGTCCGAATAATGCAGTCGATGCA
CGCTTCATGATGAAAATGGAAATGGCTTATTTGACGTTATGGGATAAAGC
ATTGGAAGAAAAAGAACTCGATAAATCATATGAAAATAGTAAGTATTATT
TGTACTCATTGCGTAGCACAACCCTGTAGTGCTAATGTGCCTAGAAAAAT
GTTAACTCTGATCATTTACTGATTAAACCAGAAAGTTTTTACCTTGATTT
AATAACTTCAAACTTATGGTAAAATGaataattttatggattttaaactg
aataaaaatgttcCACTTTAACAGGGTCGATAGTGAATGAAGAATTTTAG
aatttaggcaaaaataaaaaaatgcagtgtttccggaatgcggctGAAGG
AAAAAGGCTCTCATGCAGCCGGTCGGCAAAAGcttttttttgctaatttt
gataacttaagatcattgcaatagaactttaaagatgacttttatgtaca
aacaatATGAAATAAGCCCTGAATACAgctgtatcaactactaacgaaca
aaacttggtttacaagcgggaatatctaaccaaacaaCGTTTGATAGCTT
GGACGGTCAACTTGATTTCCTTTATGAAaaaccatatagatgaacccata
gtctgcggccgggtgagaaaatactttttgttcacccggccggtttccgg
aaacactatttttttattttagccctattttctatgttttataAGGGAAA
ATTGACTGAAATTACTAAATTagatttttaattacttttcaACAAATCAT
TGTTAACTTCGTTCACAGACCTGACATTcgataaaaaaaatctaaattcc
attttttattttttatagtaAAACAAAAGATCGATAAGACGAGGAGACGT
agtattttagaaaaacattctACCATAAAACAGCACGCATTGGTGAACAG
GGAAATGCAAAACTAAACAGGTGAATTAACTTGTCAGAGATACTGAATCA
CCATACAAGAAGCTCTCCGAGAAACATGTTATAAAATAAGACGACGGTGT
GATTGATGTAGAAACTTAAGAACTTTTGCGTCTTCGTGTGTAAAATACAG
ACCAATTCGCTTCGTATGCAAATGACTCTACGAGGAAAATCTCGATAGGC
TTGACGTATGGCTGTCATATCATTCGAACTAAATAAAGTGTTATGGAAAT
TTTGTAACAAAAATCATTGATAATCAACCGTCAGTTTGAAACTCCTGTAA
TGTTTTACTACTGACCAAAATAATAATCCTTTCCCAAGAATTTATTTTGG
TGGgctaaaaatttgatttgatttgatttgattaagGAGCTCCCGTTTTA
GAATTACGAGAAAATGTTACAGAGCGTTACCTGACCTCTACTACAATCAG
TgcaataatatattggcaccaGCCTCAAAAAAAACACTGGATTTACTCAC
TTCCCTAGCTCCTAAATCCCCTCCCCCCTAATTTCAATGGTTGAAGAAGG
CAACAGGGCAGCAGACTCAACCATCAAAGCTTAGAGGGAGGGAAAATAAG
TTTTAACATAAATTATATTATTGCAGTGATTGTAGCTGAAAagacttttt
tgcttttttgaaatcttgaattATTTCTAGTAAttataattatatttttt
aaatgcttgtaaataaattaaaagaaaattaaaggaTTTAAAAGATTTCA
TGTTGAATCAGTTTAATGA

Gene-mRNA-Prot

The following transcript feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
TCONS_00073618	TCONS_00073618	Clytia hemisphaerica	transcript
TCONS_00073619	TCONS_00073619	Clytia hemisphaerica	transcript

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
TCONS_00073619-protein	TCONS_00073619-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_96	supercontig	scaffold_96:111147..117565 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.28	0.32	0.37	0.29	0.57	0.23	10.55	11.74	6.27	4.56	5.78	3.52	10.72	9.67	6.63	25.61	13.46	13.3	0.05	0	10.63	10.24	8.06	8.35	6.4	11.44	1.77	0.75	0.12	0.06

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XLOC_045717 (gene) - C. hemisphaerica