XLOC_045616 (gene) - C. hemisphaerica

Overview
NameXLOC_045616
Unique NameXLOC_045616
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_93:146003..157020+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_045616 ID=XLOC_045616|Name=XLOC_045616|organism=Clytia hemisphaerica|type=gene|length=11018bp|location=Sequence derived from alignment at scaffold_93:146003..157020+ (Clytia hemisphaerica)
gaAAAATACTAATTAAAAACTAAAAACGACCAACAcacgtaaaaaaaaac aaagatgagATTGTTCCCTGATTGGTTGATGATCCTACCAATCGTTGACT CGAAACTCAAAACCACACTTTATTCAACATGTTAGCATAATGATAAAGGT GAGATTCGGTTCTTCTAATCAAATTCTTTCATCTCTTGGATGCACCCAAC AAATCTTCAGAAAGAATGTATCCCTATCAGGACTTCTTGAATTTGTCGCt gtcattgatttcaaagccccgaaactcctggatgggaaatgaagccactt agtTCCCATCCAGAATTCACGTGTGTTtgtgtgtttatcaaaaaaatctg taaatgcgGGGaaaacttaaggcttcactttttcttgttgATTAAAGGTT CGGGGCTTCGAACTCAATGGTTGTTGGCTCAAATTCGGCTTATGATGACC AGGTGCTGAACAACGCTGGAATCGTCTTTAATTTTTACACTGTATTTTTC ACATCATTTCTCCGTactcaagaaaaagaaaatattttttcttgcgTAAG AGATACTTAAGACCTGTCAATCAAATCTATATTCAAAATGGTAGGCTGAG TAATGGTCAGGTTTCttttttggcgcgaaaaatctGTGTCTCAGTGATTT GACTTTTCCTCGACATTATATGGCCAAAATACAATTAATCCCCATAAATA TGAGATTTTTATGCCCCTGTTTCCCTAACATTTTGTTTCTTCGAAATATT TTCTGATTATGAAGTCTCGCTGTAGTAGACATCTTCATTTCAGCTTTTTC GTCGTGGTATCTTTTCGTTTTCATTTTGAAGTTAGTACGTGTGATTACGT GTCTCTGTAACCCAAACAATGACAGTTTTTGTCATAAAACTAACCAATCA GAAGGTTTTAAGGGAACAAGGAGCCAATCAGCTCCAATGTTTATGTGTGT GCTCATTTTTATTGGACGAAAGATGAAATTGGTTTTGCAAAAGTTGGTCT GATAATAGTCACCTGTCTGGATGgaggaaaaaattgatgaaaaaatcata ttcatttttctttcttagttTCTCATAGCAAAGACGAAGCAAGGTTTTCA ATATGATCAAGAATTTGtatcagatttttttataaagaaatgtaTAGTGG TTTAATAATTGTATTCCTTGATCTCTTTTCAAGTGTCTGGATTGGGATCA TGGAAACAAAGCAATGTTGTGGAAGATCAAATTGTTATAAAGAATAACAG ACTTTGTTTTAATCTTGAGACGAATGCTTTATGGGAATTTTAGATTTGTA CTTCAACTATGATTGGGAACTTCTTCTGCTCCTGTAAGTCAATTCTTGAC CCATTTTTTTTTGACATCCATCCCACTAACTGTTATGCTTTTAACTTTTC TCAATTTTGCTGATACTCATAACTATTCTACACACTTTGGATTGTTCGCA TtaaaagcaaaacaattttttattataCCACATTTGTCATATAAAAATTA GGGAAACAATTTATTTGGTACGAGGGAatatattttctatattttcttcC TTCatggaaaaatttctttcgTCTCAATGTTTTTCTTGTGCTGTGATCTG ATTGGCTTATTTTCGTGTCTCATTACACGGATCCATTTccgaaaacaaga aaaatgaaaaagaacctCCACTCTtcaaattttgttctttttttcctcTG ACGAAAAATTTGAGATTTAAGTTTAAACTTTATGTCAATGTTtgcaattt taatatttttgaacaaacaaaagtttttttcttttttgaacaaaaatatt tgagCCAATAAGTGTAGTGAAGTGAACCTTGGACCTCTGAATCAGATTTT TGgttagtaaaaaatcaaaaggggCTGATAatgtaaacattttttcaagt tatCCACAGATTTGGATTTAGAAttttacaaccctgtctcagaAACAAAA CCCAAAAATATACCAATGGAATCCAGAATAAGGGCCAGCAACTTTCAATC GTTGTTCTTAAAAACTGAAACCTCTCACTTTGATCAAGTAGAATTACATT AAAATCCAAAATCTCTACCCTTTTCAAATGGCTTGATATAATACTGTTGC TTGAAGATGAAATGGATGGGACGGGAcgtaaaagaatttaaaaatctcca ttgattgaaataaatattttctctttaaaTAATTTAATGTGCTCGTCAAT TTTCTTTCACAacgatgaaaattaaatataatACTAGCATCTAAAACATG CCTTCATAATTGTCAAttaaataacattttattttaaagtaAGGATATAC TATACTAAGGCCTACTAAGATTGAGACTTTTCTGTCCatatttaaaatta aatttatatatcaaattcaaaaactgTACATTATTTACAATGGTAGCAAG ACTGAAACGCCtcaaagaaaatttcgaatgaTACTCATTCACTTATAAAA TAATACTTccattttgatttaaattcAATAACATATTAAAATCTATATAC AATTAGAGAGTGAAccctttaaaaatttaaattctccTTTTGTGCCCATC AAATTGTTAAATTTTCACTCAttaatttggaaaataaaaatgcaaaaaac tATACAACtgaactcgaatgtctcctacAAATGTTTACAATTTCCAAGTG GGATTGATTATCTTCTCTGATGTCAAATACTTGCAGGATTAGAAAAGAAT GATTGCCCCATTGCTATGACATCTTATCGGGTATATGTCAAAGGAAAAGt tgtaaaacaaaaaatatggcTTGACTCAAAACCATTCTANTGCTTTGCga accaaaaatttcaaaagagcCTGGGCAACAAGTTGGTTGTCAAAAAAATC AGCttcattttttacaaagaaAAGTTCTTCCTTGAGCTTCAAAACAAAAT ACCATGNTCATTGATATTTTCTTGGTGTTGCGGGGCTGGTGGATGCGGTG GATTTCTCATTTCACCAAAATACTGATCATTCATTGCATCTCCAATTTCT CTCAACGTCAAAGCTGTCACTTCTAATAATATCAACTCGTTGTCCAATTC ATTTNTCACttgaagaaaaatctttttaatgacGTCTTTTGTAGCAAGTT TTTAGCTTGAAACATGAAAGTACAAGCCGCAAACATATTTAAAAATAGTT TCATAAATTACTGGACGAAACTGTCACTCAAGGTGCATGtgatttgcttt ttcaaaatttggatagTGCATCATCGAATCTCGACCGTGCTCCAACTATC TATAGTATATAGAAAAAGGTCACCccgaaaatttaaaatgtaagGAGAAA GTTGGATATTTTTCAGCATGACATCCCGTCGAGAGATGGGAAGTCCTTGA AATCGTGAGAATTTACCATCCCTAATCGACTAAAGGCTATCAGAGACAGA GGTGTAGCACTTTTTcgtagtttttttttctatactTTTTGTATAATGGG TTTTGACTTTAAAGGATACTTTTAAGCTAGGACAATTATTTTCTTAATAC acgcgttttttataagaagcagTAAATTTTAGCTCTGGCTGGGCtactct taattttttttttcttaatacgcttagtttctttacttaaaaacaactta aactgtgtttaaaattttataaatcttAGAAAtcagtaagcaaacgatat cactcttatttaaaaataaaacctttcatCTGGAATATACATGGTAATGG ATGAATAAAATTGAGACGAGAGATTGAGAAAGAGATTGCAGCTATACAGG AaatgtgaaaataatttttagacTGACCTTTCACAGGGAGGTCATGCTAC ATAAATACAAACCgtctgtagaaaaaaaaaacttgtaacaTTCAATCCTT AGAGAAGGCTttctttaagggctctgaccaccTAAATTTTtgccacgtac aaaatataaatttctacttgatgaagcacacaaaactgtgacatgttata cattttctgttaggtcaattatctttaatttttttgtggAATATGGTATT AACCAAACTAAAtatagattttcggaaaatttttctaaaagcttatttgt ctcaaaatcttgaaaataatgctttttaaccaatttttcatcccaatttt tcatagaataaCAGCCTTAagcttttgatgcattaatttagaaaattttt ccgaaaaatttaaaacagttcaaatctttgcggacagtttgaaaaaaatt tgaaacaaaaaggttaattacccattaaaacttagaaatttttataaaag aaggtaatgCAACACACTATTaacgtttttttaaagttcatagcgTCATT CTTGCAATCAAATTCTTAATTACACTTACCCTATTTGGCCTAGGGTGGGG GGCTGGTTccgttcggaggtcaaattattggtaatagctcctgaaataat agagcttttgccatgaaattttctgtaaatccttttatttgacttttatt tagcttcaaaataaaaaaaaaattgacacctaaaaaatttcacaccttga gcatgatgacatttctgacagtaaggtgtcaaaaattgacacttttccaa tacaaatattttaaatgtcaaatatatcgtttaaaccgtaatttattgaa tatttaggataaggataagcattttaaactcaggcaattTTTTTCTAACG CCTTTGTTAGAaaacaatagctatttatatgaacaaaggaaattttcgct ttttgctcactttaggcatgatgagtgacgtcatcaaaaaagattttttt caaagttgccttacgtgacaaggatcttgtgtgccaaatttcatccaaga agacccactagatcaaaagttaaggggtgctacaggaaaagccccccccc NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaaaaagacc cactagatcaaaatttaaggggtggtacaggaaaacccccccccccccta gttctgaaccgcccctaaaagcctaggttgaatagggatttgattaaaaa gtaatttataaagacaattctttgttaaaagtgttaaagaacctaaaaca taaattttatgtttaaatactaaaatcaattttttgactatggtcagagt ccTTAAGCTGATCCTGGTACGGTATCCCCTTTTTGACTGTTTCCCCCAAA GACCAGTTCTTACTTTAATGGGGtgaattttcgcgggaattaaatttcgg ATTTCGTGGATGGTACTATTGGGATACGATATTTTCTTGGTTTTGACGCC TTTTACTGCCACGTCGTGCATGTTGGTTTTTACTGCCACGTCGTGCATGT TGGTTTTTTAATTACGCATTATTTAGGTTTtttttgatgccagtaaacat ttaCAAATTAGTTTGtctgacatttttttagttttgtttaaaaatatttc gcgaataACGCCTTTCCGAATCTTATTAGTATCTTAATTTGGCGGAGGAC ACCAACAAAATCCGCACAAAATTTAATAAAGAGGTTTTAGGTTTTTCCGT CTCAAAGCTCTGCATAATTCAGCAAAGTTTCAATAACATGTACTAATTTG CTGTGCCattttgctttgaccactgtgcTCAACTGTCACAAGTAGGATTC TCATTCAACTTCAGCATTTCTTCAACAAAAACCTAtcagtcaagaacacc ttcaaattagcctatcataggctgattagcctatcataggctatttagac tattttatataggctatttagccgaaaatcgattaaaacctcgatttctg acgaaatataaatatgTAAAACCATCATTGCTGTTTCATCTCAAATAAGC CAAACCCTACCCATTTCCCTTAGTTTAAACTATTTATAACATTTTACTAT CTATGGCTTCTCATCCCATGTTTACAATCCATATGTAGAGGAAACGTCTG CTTTATATGATcctaagaaaaaatctttcagcTCTTTCATTTTACtttcc aaaataatcaaaatacttttaaaCAAGTCCTTCTAAGCTTTTAAACTATC AAATATCTATGGTCCAAATTTTCTTgcttattttttgcttattttttgct tatttctaCCAAAGTTTTTGGGCCATCAGGTTCAAAGCAGATTGTTTGTT TAGAAAGGATGAAAACTTTTGATCTTCTTTTGAAATTCTCCAAAGTCTTT GTTTATAACTTGGATGAGATAACCTTCGGGTTCTTGTTTATTTTCGGCTT TCGGGCCTTTTGAGGAGTAAACACTTTCTCCATCCATATGTCCTCTAAAA TGTGGTACATTTGATTTCGAAACCTTTGAAGTTTATTGAAATTATATCTT CTTGAAATAACTCgttaaaacattttgaaaatcattttgaaaagtGCTCA ATATGTTGGTGCTACACGCATCTTAAATATATGTTTCAATTATTTATCAA TCCATATCATATGGATGCTGTCTTATCTCATAACAGATCGACCATTCGGC GCATACTACACTCTGCTCTAAAAGGTTTTACTTAAAAATGAAAGCAAAAG TGAcacgtaaaaaaattgagtaatttgactaagaacattaatgtatgttt attaatagtgattcttatagataaacatgcgttttttgagccaacaaatc tccctgagccatcttttacctatgatggtaccctacttccatgcaaaaaa tcagaaaaaatcaatgatccaatttttcacaaagtccaaaaaacccNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNaagtccaaaaaacccgctttttagccgttttttgg cccaaatttgcccaaaaaatttttttttcgaaaatcgggctccgtcacat tttggccatcaccgtcttgcacctttgtaccaaaaatcaaatgattccta tgattcaatctcgagaaatgctggtaacgaacggacagacggacgaacgg acagaggtgaatttataggaccttcaccccaccgggtaggtccaaaaagt caaAGTGGTGTGTCAACCGTTACATTCTGTTACGGAGCCATGGCCTTTAG AGACAACGTGCCATGCGTGGAGTAATcaggaaaaataaaattaactcatc aaaattatccaaataaaaaaacctCGATCATGTTCCCTTTGGCATCGAGG ATGACCTCACAGTGCATTTTTTCTCTTCTTGCGACCTCTACAGCACAATT CTTCTGATGACCTTACAGTGCGTTAccacaatttttttatcaaggAGTAT GTATTCCTTTTTTATACCTGTCTGGCTAAATTATAATCACACGCTTTTTG CTTCAGCATTCAAACATAAGCTTTTTAGTTTGTTCTATTTAAAAAACCTA CCAAACTAATCGGTCAAGATCTGTCTAAGTAGGGTTCTATTAAGCTTTTA CTATAAGTTAATCCTAAATTAAATGAATGATTTGATTCAAACTATCTTTT GGGGGCTCAAAATTGTTTTTGGATTcgaaataaaagtgattttcaaaaga aagtaAATCTTGGGAAAAGGAAACGAGGAAACAATTAGGATTGTATAAAT TAAATGATCTGAATCTGGTGTATTGGATTTGTCTATGGTTTCAAAATAGA ATTTTCGTCTAGCCATCTCAAGGTCTCAATTTcgtattttgagatttttt tagaAAGCGAAATACCGAAAATTATGTAACAATTTAAACCTCCTTAAATA CACCCAGAACAATCAGGAAACATGGCCCTATGAACCCCTCACCATGGAAA GAAGGACCAATATAGTTTCTCATATGTGAAAAAATACCCTCACCTTTCAT TCAACATTAGGAAAAGGGACACCCAAGCACATTTTAGGGAACACTTGATA TCTGATTTTTgacaataaaattcaaaacgccCATCTGGTATTATCTTCTT CAATTCATtgtcactgagacagggttgtTAAGAACAAAATACTCACTCGG CGCGTAATATAAAGTGTATCATCAGTTGGTCAAGTCAGgaaacaaaaact ttcaatatcTACAAATTCGTTGCTAGAAATTtcacaataaatatttttta ttgaaaattttcatctaATAATTATATTGAACTTTGATTTTCAGATCATC CTCGTTATGTGCAGATCGATGTGAAATCGTTCTTGAATCTTCATCACCGT CTTTTGATTTCAACACCTTCCCATCATACAGTTCGAGGTAAATACCCGAa gaagtttttgttttgattgattctCCGATAGCCTCCTTTCCATTTTTCTC AGCCTCGTTTGGGTTTTCGTAGACACAAAAAGTTTGAATACAGGGCAAGT CTTTAGAGGTGTTGCTCTCTACAGAATCTTTCTTTTGTATTTCAATCAGT AAGCTATTTGGACCATATCTTGTTTTCTGGGACGGTTTTATCATTCCGAT CGGTGATTTATTCACGGTCGCCGGAAAGTTTGGAATTTGAATCCCTTTCT CACTGATGACTCTCATTCCGCAAAATATACTTTGGAAATCATTCATCGTG AATTTGAATTCGTTCTGTTCGTAAAATGGTTTGTCCGAATCTTCAGAGTT AATTGAACACTCTGAGCTATTTTCATCTTCAGAAAGTTGTGTTTCGTTCG CCCATTCTAAAGCTAGTGGCTCGCCAGTTAAGCTGCATTGACTAGCTTCT TTCTCTTTAGACCAATCAGAAACTATAACAGACTGTTCTGTCAATTTGAA TGGCTGATTTGGCCGATCTGTTAGCCAATCagacacaaaagaatcttcta aCTCCGGCATCTCAAATTTTTGATACTCGTTTCTCGGAATTATTGAAGAT TCCACGACAACTTTTTGACAGGAATCCTTGGCTTTATTCTCGGTGAATCT AAAAAATGATGTCAGACAATAAAATGTAACGTTTGCTGATCTGGTGGTTG GAATATCACGTGATATGACTGGAACAATACACGTATTCTCGATAATTTCT TCACATTCGCTTTCTTCGATTACATTCATTTTATCGACATATCTCGATCG AACGACTGAATTATACAGATTTTTTGGTTTAAGTAAATGAGGGGGTGATG TATTGCTGACGAGTAATTGCGATGATTTGATTGGAACGAGAATTTCTTCG TCTAATAGCGAAACATCATCCTCGGTTTCTGAAGTCTCGTATAAATCACT CTCCTCGTAATTCGTCGGTAAAAAGTCGTCGGCTATCGAGGTATTGCTTT CGTTTTCACTGTCGTTCTCAAAATGACTGTTATCGATTGGTATGTAGCGA AAAATCCCATTTTGGTCGGAATGAGTTGAAATGGGGAGAAAATAGGGTGG TGACTCAACATATCCaatgatttcttttgttatGTCTCGACTCTGAATTT GTACCTTCTTTTTAGATGCCGACAAAAGATTTTCCTCACTCTTGGTTTTG ATCATTCGTTCGCGCCGTTTAAGAGATTGGAAATAATCTTCACTGTCGGT TTCCGGATATTCTGGTGGTTTATGGAACAAATCATCGCCAGAAAAGTCGG TGTCATCCGCGAATTGGAGACGAATGACCGGAATTTCTAAATCACCGGTA CTCTTCGTAAACGGATCTTCATCGTCGTCTTCGAaagtgacttttttgaa ataggACGTATCGGAACACGAAAACGGACGTGTCCGGATCAACGGTGGTT CCGATTGTGAGAAATCATGCGGAACGATACAACTTCGTGCCCGGTAAGAC GATTGTACGGAATAACTGTAAAAACGTTTTTGACCTTCGCGACGTCGCAA CGATTCATAGTAATCTTTATTGTTGGGATGATTTGGGAATCTCTCATCTT TGAAGATATTTTGATTGCGATCTACGGGAGTATACGGTTCTAACGATTTC ACTTTATGAGGCTTGTTGCTATGTGAACAGAAAAGCTGTAACGAAAAACA AAGGTAATGGAAAGTGGAATAAATATTGATGTTCTCTCAACGTATGGAAT TGCCAATTATTGAACGAAATTAGCAAAATCATTGTAGGTTTTACACAATT CAACCCTTAGCTTTTGAGGGGACTTTTAATGAACCTTCAAAGAAATGACG TCGAAATTCTTAATCTCTAAGAACCTTAATAAAAAGACTTCTTCagacat tttgacgtcattccttCCTTGTAAACTCGAGTCCAATCTTCTCATGCTTA AAAGGTTGATAGGCGTGTTAAGACTACAAATGATACTTCAGATCacatca caggaaaaaatgtaAACGGTGTATATTTTCTTCTGTATGCGCCAGAATGG TAAgatttatttataaaaagagTTTCCGAAGAATATATGCTATAATGTTG TCAAAACCTAAGCACAATTCAAACACCGATATCTcatagacccactggaa aattagcccaaaatttcgtccctggtggaaaaataccctacaatttcagc cccactaggaaattgactttcatttcatccccacttgaaattcaatgttt agaAATTGCATTCCAAATCCCCACTGCAATTTTTGAGCAgggaacaaaag aatttatatcCTCAGTGGGATTTCGATAAAGATTTTCATCCCCGCTGCTG AAAACACtaccaccggggctgtgagacaggggagtATTCaagaattaaaa agaaattacttAGATTTACTGACTTTCGGTCATTTTAGTTTTAGTTGAAT AAATTAAGCCTGGAAATCTTGAAGAATTTCCGTGTTCTTGTGAAAATATA TTTACTTAccgatttttgtattttgtgttTGAAACTTCTGAGAAAGTTTG TTCTCCCTTTCATTGGGGTGATGGTTTCAATTTCTTCATGTTGTTCTGTG TAGTCAAACTCCATCTTTCTTTCAGTTTCAAATCTAGAAAATTGAGAAGT TCAAatccaaattatttttaatgTATGGCCAGTTCAGTTCCTCAAAAGTA TGAAATTTGTCTTCACAACTTACACAAAACATTCTTAAAACGCACTCTAG CGTATTCATGTTTTCAGA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00073492TCONS_00073492Clytia hemisphaericatranscript
TCONS_00073493TCONS_00073493Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00073492-proteinTCONS_00073492-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_93supercontigscaffold_93:146003..157020 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.19 0.44 0.13 0.31 15.42 10.57 11.41 10.38 4.53 3.08 3.85 7.21 0.79 1.28 0.63 0.75 0.76 1.4 0.87 0.54 1.11 1.41 1.63 2.04 1.63 2.45 0.52 0.16 0.71 1.18