XLOC_045596 (gene) - C. hemisphaerica

Overview
NameXLOC_045596
Unique NameXLOC_045596
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_92:242684..246144-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_045596 ID=XLOC_045596|Name=XLOC_045596|organism=Clytia hemisphaerica|type=gene|length=3461bp|location=Sequence derived from alignment at scaffold_92:242684..246144- (Clytia hemisphaerica)
TAAGAATTGAAAACAGTCAATATCATCATTTCAAACAGAAAAAAAACATT
CAATATCGTTTCCCGGTCCATGTGGAAAACGCGTGGGACTGATTATGAAG
ATGGTGGATATAGCGTTTCTGAAACATTCAGATAAATTTGTTCCTATGGT
ATGTCCTTAATGTATCCTTTAGAAAAGTAGAGGCACGAGTATAAATAATG
GAATCCAAGCTCAAAAATAAATTATCTTTCTTATTGGGGAACACAAGAAG
AAACCATGAAGACGATATTTGGATTGACCATTCTCTTGACAGGTAAGATA
TCATTTTGAAAAGAGAAAAGATCTTAGAGAGGGCTAACGTTTAATGCTTC
TTCTTAACATTACTTTAATACACCCCTGTGTCACAGACCCGCTGGGGCTC
CAGCCTCACTAGAAAATTTGGCAAAATTGTTGTCCTTGTTGGGATAAACT
TTTCTTCATCACTGGGAAAATTGGCTTTGATTTTATCCCCATTCTAAATT
TTATATAAAAAAAATGCATTCCAAACCCCTTTCCGTTGGATCTATTAACC
TCGGAACCATATCCCCATTCGGTTTACAATATAAATTCTTATCCCCGCTG
TGGGGAAAAAGTTTCACCGGGGCTGTGAGAATGGGGTGTTTTAATCTGAT
TAAACTTTTTAGAATTCGCACACTTTTTCAGATTTATTTCCAAGAAACAT
TTAATGCAAAAGATGCATAACGCACCCCTTTCGAAAAATTGGTGAAAACA
TTTTCTAATGGTAGTAGGACCATTTAAGAAAGACTGCCTAAGGGTTACTT
TTTAACCACCGGGGACAAAATTTTAGCAAAATTTTATGGTGAGGCTGGAG
CCCCAGCGGGTCTCACAGGGCGGTGTATTAAAGTAATGTTGGTCCCTTTT
CTGAGGAATAGAGCATTATCCTTCATCCACGAGCCCTAGCACAATCAGGC
TTTACAACGCACGTTTTATCCACCTGAATAAAAACAACAGCACCACCCCT
GGATTGATAATTCATACATCGATTATGTACCTACCTTTTCTTCACACATA
GTGTGGTGTTATATGGTCAATTGTGACATTTCACCTGTTCACCAAAAATT
AATTATGAACTAAAATCATTCCCCTGGAAATTTAAGAATAGCTTTTTACC
CTCTTGGAAAAATGAAAAGACAGCCCCTGGAAATCTTTCTCGGATTTACC
GTCCACCCCCCTGTATGGATATAAAATGGAATGGCCCATTTAAGAAATAC
TACCTAAGGGTTTCTTTTTAAAGGTCCTTCTTCTAACGAATAGAGCATTA
TCCTTCATCCACGAACCCTAGCACAATCAAGCTTTACAGCGCACGTTTTA
TCCACCTGAATGAAAACAACAGCACCACCCCTGAATTGATAATTTATATA
TCGATTATGTACCTACCTTTTCTTCACACATAGTGTGGTGTTATATGGTC
AATTGTGACAGTTCTCCTGCGTTTATTAAAGACCCGAACGTTGATTTCTG
TGGAACTGATGTCAATACTTGTGATGGAAAAACACCAGGCATACATGTCA
CCATGAGTTATATAGCAGTTGAATGTAGTGCAGGCTTCACACTGGAAAAA
TGTTATTATTGCGACTTCGACTACAAGATGGAAGGGAATCCTAAATTAGG
GTATGTTCCAAAGTGTTTGGCATTTTTTGAAGCACCTAGTCTCAATGCCG
GAGAAGATTTTTGTAAGAATAAATATTGCGAGGGGAAATCGGCAGGAGAA
TTCATTGTATCGGGGAAAGAAGAAGAAGAAGATTCTGAGTTTCTGGTGAA
GTGTACTGGCAATTGTGTTACTGAGCGCTGTTATTATTGCTCCCTTGACG
GATTCAAAGTTAACAAGAGCAAGGACGGACAACCCCCTGAATGTGTTTAT
GAACTTTAAGAAAATACCTTTGAAGTAAATTTAACGATATTTATTGTTAA
AATCTTTTTAATCATGAGATATTTGTTTTTCTTAACTAAGAATTTGTTTG
TAATTACAAGTTTGAATCTAAAATCAAGCCATATCAATCCCCCTAATATT
TCGAAGATATCTTTTCAAATTATTCTTTGATTAATTTATTCTAAATTTCT
AATTTTCTAAAACTTCATTAGAATAATATTTTCATACAATTCTCCATGTT
TATTTTCTAACTTGACCACAAATTTCGAAATTAAAAGTTACAGTGCTCTA
GAAATATGTCCAAGTTGGATAATATTTCATAATCAAATAATATTACAATT
TTCTCTATAAAATTACACCACAATACAAAATATTTTGGTGTAATTCGTCC
AATACCGGTTGCACCAAAAAAAAAGTAGACAGGTTTGTCGAGACATTGTG
AGCTTCAGGATTTAAATTTTTTGTTCATTCTTTTTTTATTGTATAGAGGA
TGCTCTAACTTGAATTTTGAGCTATCATACATTAAGTTTGAAAAAGTATT
TCGAAAGTTATTTCCAAAAAACTGACTTTTTTTCCATGTCGAAATTTAAA
AAAATCATTAAAAGTAGCAATCACGCTATAAATAAGACAAAATGACAAAA
ACACAATTTCATTGTTTTTTTTATTCCTTTTTCTCTTATCTTATATTTTG
CCAACAGTTTATCCTTCTTATTTGCATGTCATGAACATTTCCAACACCAG
CAAACTCAATGCAGACCCAAGTTCTTTGAGCAACTAGTCGAGGAATGGTG
ATCTATTTTTTCAAAAGTTTTCTCACATAGCACACACATAACATCAAAAC
CTCTCTTGGAGATTACCAAAAAAAAATTTTCAGCCTTTCCAAAAGTATTA
TCCCAAGTGGGAATAGCTTGTTTTACCATATTCTTAAATTCCGTAACGAG
TTTTGATGAGCACAGTTGTATTTTTTGGTATTTTTATGTGTAAAGGAGGT
AAGTGTAAAGAGAAAAGTTTGCTCGCTGTTTTTAATGATTTTTTGAAATT
TCGACATGGAAAAAAAGTCAGCTTTTTGGAAATAACTTTCGAACTACTTT
TTCAAATTTAATGTATGTACGATGGCTCAAAGTTCAAGTTAGAGCATCCT
CTATACAATAAAGAGGAATGAACAAAAAAAATTTAAATCCTGAAGCTCAC
AGTATCTCGACAAAGTTGTATACTTTTTTTTGGTGCACCCGGTATAATGT
TGAGTAATTAAGAGCCTAGAAAGGTCTCACCCTCACACAAAACTTAGATT
CGCTCTTTTCGGTATTGAAATATTTTTTTCAATCGTTCATTTGATGAACA
TGGAACTCATTAATGACTCATTGACTCATTTGACGGAGAATATTGAACGA
AGCATGCAAAAACATCAAAAACTTTAAAATAGAAAAACAAAAAAATTCTA
AACAATGTAAAGGTTATTTTTAAAAGAAAATTTCCGTCGCATTCGCAGGG
TTTATGGTTTCACATCTTTGTTCAAAAACAGGAAAGCTATAGTGACTAAT
TAATTAGCAAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00073465TCONS_00073465Clytia hemisphaericatranscript
TCONS_00073464TCONS_00073464Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00073465-proteinTCONS_00073465-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_92supercontigscaffold_92:242684..246144 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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min expression (0 tpm) - - (70.99 tpm) max expressionaGrOo_1GrOo_2FGOo_1FGOo_2EG_1EG_2P1_1P1_2P2_1P2_2P3_1P3_2PoPr_1PoPr_2St_1St_2GO_1GO_2PH_1PH_2BMF_1BMF_2MMF_1MMF_2M_1M_2GEC_1GEC_2GEN_1GEN_2
Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.02	3.73	2.45	2.42	0.05	0.08	0	0	0	0	0.02	0	0.03	0	70.99	5.85	0	0	0	0	0	0.04	4.41	3.6	0	0	0.36	0.53	2.21	3.2