XLOC_045588 (gene) - C. hemisphaerica

Overview
NameXLOC_045588
Unique NameXLOC_045588
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_92:236890..240906+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_045588 ID=XLOC_045588|Name=XLOC_045588|organism=Clytia hemisphaerica|type=gene|length=4017bp|location=Sequence derived from alignment at scaffold_92:236890..240906+ (Clytia hemisphaerica)
CACTAATTTGCACGTTTTTTCAAGCTTCATTCATTTTTTGCATTAATTTT
CTAGAAAATACTAACCATAAATTTCgaatataaaaaacaaattaacaAAA
TGGCATCAGACAATGTgagcaaaacaatgaaaatcattTCAACAGTCAGC
TTGGGACATCTGGCAGGAATTACAGCATTTAAAAGCAGTTGCATACAACC
TGCTCTTGAAGAACAAGAAGATGTACCAGCTGCAGCCAAGGTATACAtct
caactttctttttttCGTCCACTTTATTCATCATTTCGACCCTAGTTGTA
CAGACAGACGCGTGCCATTTAATTGCTTATGATCGTCCTAAGCTCGATCT
AATCCTTTTTGACGCCCTTTTCTTTCGTATTTATGTGCGAGAAAAAGACT
TGAGACCGGTTTAAGGTGATGTAACTGGACAAAAAAAGTGCTGATCTGCT
GCTACGGTTGCAAAGGTGTTTCACTTTAACAACAACTTCTAAGTACTAca
accaggggggggggcacgcagttactacaagacatgaagtgctttttcaa
cactttttttcaggaccaccaccctttgcagttactacaccttggtagta
actgttttcagaaaagatttccaggtaccacccttgtttttgagtgatat
catcaaaaacatgctcgaaattatCCTAAATTGCGATtgtttttcaacct
aaagccatttttgtgctagattttcttttaatttacttggttaacagctg
ttgagaacattttaatgataattagggaaagcataatttcaaagttgggt
ctgagaaaaatttcaaatttttttcgtccatttatatcaaaaatattttt
tttaacaaagaattttttcacaaaaaaattcattttttgtgaaaaatttt
gaaagttcttttaaaagaattaaaatacaaGCACTTgatacaccaaaagt
gctagttttagtgtttggcaccacccccaaacagcagttactacactgtg
tagtaactgttttcataacttctgaatacagtaccaccacggtagtaagt
gtcatactgtcttgtagtaactgcgtgcccccccctgcTACAACCAATAT
AATCGATATGAACAGTTTAGAACAGTAAAATGAAAACTGTTATTTACTGT
GATATATCCTAAAGGGCCTAAAGGCATTTGATATTGATTGATCCCTGCTC
CCAAAAGTTATGTTAACCACCTAAGGCTGAATTTTAAGCTTggcaaattt
aaaaatgaaataaatattttcttccttATTATCGTCGCAGTGTCGAGTTT
ATAGTGGTTTCAGTGGGCTCTTTTAATTTATAATCCTCTCGACTTAGCTA
AGGGGCCGTAAAACCGTGGTCTGCAAAATAGCTAGTTTTtcgtgaattga
aaaattggtgTCTTCATTCTTTAATTTCGATCAATTATCGATTCTTATTC
ATTCAGTTTCAACtatgaataaaatttcaactttttctttttcatataaa
agaaaaattagcaTCATAAATGCAAGTGAAAGGCTGTGGGATGCATTTAA
AGTTATGTACTAAAATCATAGTTTTTCCAAAACTGCACGGGTTTGAGTaa
cttttgaaagtttatttttcttgaaataactCAACATTACTTCGTGTGAG
GTCCTCCGAAGTAGGGGCTAATTCCAGATGCAAAAGAAAAGCAGAAAAAT
CCTAAGAAGTGTCACAAAAATCTCAACTTTAACTTTGAAGCCGCATAGGT
CNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NATTCAGCTTGACAGATCTCTTCCTGTGAACAGTTATGAACGCTGAGAAA
GACTCAAGTGATAAGAATTCTACAAAGAGGAGGGTAGCCAGACAGGAGAC
AGGGGTGGTTGGTTGGTTTCTAGCAATATTTCTGGAAGGAAGTTTTCCCA
TGCATTGAAGTATTGTCAATTTTTAAAGGAGGATTTTGATATGAACTGGA
CAGCAATCAAtcggtttttcatttttccaccTCAAAGTCAAAGAAGTAGG
AGTACTGAGCgggaaaaacaaaagaacaaaaaatgcAAAGAAACTGAGAC
TACATATTTTACAAAGCATTGCTTACCTTCTTGTATCGACAAAATGCTTT
CTAAATCAAACTGCACCAttacaataatttcttccttttccAACAGTCTT
GATTTGTTGATGTGATGTGGCTTGAAATTCTTCTTTTACTTCTTTTTTCC
TTGCTTGAGTAGCCAACCAAATATCGAAAAAATCTATATCGAGCTGCAGA
GATCCACCTAAAACTTATTTGAACCGATAACAAAAATTTGAACACAGAAA
ACTGAGGTTAACGAAGCCTTTCTCTTTCTCCTCATTATTGAGagatattt
tgaatgaaatattGCAGCAGAAATGCTCTTGGTTTATTAAGATGAAGAAC
ATATCCATAGATTGAATGATGGTCCTTCCATTAAATACAAAGGCATCTTT
CAAACAAAGAAACTTTGAGTGACCTGCTAAGAAAAATCTCCCACCCCTCT
ATtcgcttttttgaaaaaataaagtggACTTCGAGAAATTTCCATACAAA
ACATTTCCAAGACCGTCCAGATTGCTCACACATACCAAATTAAAATCgaa
taaaacattcgaaaaatagTCACGCGCGTGTGTTCGAtgataaacattcg
aatcttaAAAAGCTAGTTTACACGGCGAAAAAAGAGAAGAATTGAAACAA
GGCTCTATTTATACTCGCGCGcggagaaaaacaaaatttttcgaaaaatc
acgTCCTTAGACAACTCGAGCTAAAATACTCCAAAGTCAGTTCTTACATT
TTTTgattatcttctttttttccaCAGACCATGTCATGTATCTTGAAGCG
TTCATCTGTTCTCCCGATCGTCAGTATCGTTTCATCAGCCTCTTCTCTCT
ACGTTTATTACAAATCGTATGGTACAAAGAGCGAGGATGAGTTCTACCTC
ATCTCATCACTTATGATCGGTGGTTTGGTCCCATACACAGCTTGGATGTT
ATTACCCATAAACCAACACTTCTTATCAGAAGGTGAAACGTTCGAACACT
CAgatgaaaaatggaaattccTAATGAAAGATTGGAAGAAATGGCATCTA
CCTAGATCTGTCGTTTGTGCTTCTTTATTCTCGATGGCCGTATATAAATT
GGTGTTTTAAACTGGTCGTGTTTGAGGAAATATTGGTTTTGAACCTCGGC
TGGCCGTCAAATACGCTCTTCCTGGAAAGTTTTATCAACAGACTGAGCAC
GTGATGTCATGGAAACGAGGTTACCGTTTCTCATTTAAAACATCTTTACG
TCCTTCTTAAGAAAGATATTTAACGTAAAAATAACGTTTTTTACCTCCAA
ACATATTTTTAATTTAAGATAGTTATACCGGTTATACACGAGTTGCTCAA
TTTCAAATCGAATTACCTTGTTTCTTCTCTTCATCCTTCATTTAAGAAAG
TATCAATTCTTGGCTACAGTAATTTTCTTTACGTTCATCTTATTCATCTT
TCTACATAATTTCCTCA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00073453TCONS_00073453Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00073453-proteinTCONS_00073453-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_92supercontigscaffold_92:236890..240906 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
36.81	34.07	13.15	13.3	11.88	8.55	28.09	28.9	18.87	16.85	19.69	18.52	10.77	6.93	10.67	10.13	25.01	20.1	9.1	10.4	9.94	9.19	22.34	20.31	63.77	53.89	5.74	4.1	8.52	9.79