XLOC_045558 (gene) - C. hemisphaerica

Overview
NameXLOC_045558
Unique NameXLOC_045558
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_91:392060..397118-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_045558 ID=XLOC_045558|Name=XLOC_045558|organism=Clytia hemisphaerica|type=gene|length=5059bp|location=Sequence derived from alignment at scaffold_91:392060..397118- (Clytia hemisphaerica)
TCTTAGATAAAACAATGAATTAAAAAAATAAAACAGAATTCAATGCATCA AAAGAAAATCATATTTGAACTTGAACACAATCCAACATGCCGCTTCCAGA TAACCGCCGAATCAATGGACCACGTGAAACTTATCAAATCACCTCATTTT TGACGCCACAGCACAACGACGCCGATGTGCCAAGCACCGGGATTGTGAAC GATAAAGGATTGAGGAAAGACACACGACGTACAGATGAAGTGCGTCCGAT TTATTTGAAAGCAGGTAAAACAGATGAGATTCAGGTGCCATCATGCACAT TAATAGTAGTTTACTGTTATGTTACTTGTGTATGATTATATAACTTTACT GTTTTAGTTTTTACCTTATAAGCCTCTAGGCTAATAAGCCTCTATAGCTG ACCACCATACCTTATCGGGGAAAAAATGTCGGGATTTTGATTAGTCGGGG AAAAAATTCGTCGGCGAAAAATTTCGTCACCCCCTTAAAGTTTTCGTCAC TTTTCCCCGACATTTTTTTCCCCGGTAATGTACCATGGACACAGTTTCTC AATCCCGGTAAAGCAAAATCTTTGGTCGGAGCTTTTTGGAATTGGTAGTT ACCCTAATGGTAGCACTACTAAATGTTGATAATGATAGCATTACTCTACT AATGTTTATGAAGATAGTTTTAAAAACGAGCAATTTCATTGAATTGTAAG TTTACCCACATCGAGTAATGGTACCAATGAATAGGGCACTGCTTTTCTAA AAACTCCGATCAAAGACGGCGGGCTTACTACCAGAGAACTTCAATACCTC AAAAGTGCACTCCTGTGAGCTCTTACCCTAATCCTTATTAATTATATTGA TATCTCTAACTGAAAAGAAGGAATTAAGATTGGGAGATTTAGTCACAACT CTTGGTACAGGGTATATATAGAAAATGGTTGAAATTGACGTAGTGTCAAG AGAAACCGTTACAGTGTAGGTGGTTTTAGACCATCTCGTAGCTTATCAGA TGAAGAGATTTATAATTGTAATTGCATTGTCTTTTAACGAGTGTTACACT CCTTCGCATGCTTCCGACGTACTTGCTCTATTGCCTTAAATCCGCCAATG TACAGGGGTGTATTTCTTAGTGTGTTTTTTTCTAGGTGTTGTTCAAAGTG CAAATGGTTCCGCTTACTTGGAGACGTCCGGTACCAAACTAACGTGCGCC GTGTATGGGCCACGTGATTACGCTAAACGTCATCAATTCCGATCTTCCGG TAAACTCACCTGTAGTCTCACGTTTGCTCCCTTCTCTAAACCGCAACGTT TTACTGAAATCCGGGACTCTCTAAGTACGGAATACTCTAATTTCATAGCA GATTCTCTCATGTCCGCAGTATGTCTTGACGCTTATCCGAAATCTCAAAT CGACGTATACGTTAATGTGTTGGAAGATAACGGGAATACCTTAAGTTATG CTATAACGGCTGCGTCCGTTGCGTTGGCTGACGCTGGAATCGAAATGGTA GATTTGGTGACGTCATCAAGCCTCGTTTTTAATGATGACGTCTTTTGTTT GGACCCAGACTCCAGCGAACAAAAACACAAAGACGTTTATGGGAAAATGT CCATAGCTTATCTACCATCTTTAAATAAGATTTCGTGTTTGCTTCAAGAT GGCGCAGTGGAAGTTGAACGTTCTATTGAACTTGTGAACACGTGTTTAGA GGGTTGCTTAAGGGTACATGACGTCATGAAAGAATGTCTTTTAAAGGCAC CTAATACTGACGAGGAGAGTTGAGAGGGGAATGGAAAGAAAGTTTTTAAC ATAATAACACGTCCGGACAGTAGTTTATTTTCCCCCTTTTTCTTCGGTTT ATTTTAATTTAAAACTTGATTAAGTCGATGGCCCCTTCAGCTTGGAAAGA CTCTCCGCCATCTGAATCGCCTATAGTTCGAAAGAAATTGATTGTCTCTT ACATAACGGCCAAGCTCTGGCCTTACCTTGTAGCAAAAGTATGACAGGAA GAGAATTTTACCCGATGGTATCTAATTACAGGAGTAGCATATCAAAAGTT GATTGTTAATATACTCATTCTTATAATTTTACCTCATTTTACAGCTAAAA CCTAAAACAAATTATTAAAACAAAAAATACCTTGTTGGAGAATTCAGTTT ACCAACAAGACATTTGAACAAAGACAACAAAACTGCCGATTATTATTTTC TTGACAAAATGGTGGTATGTATCATTATCTTGTTTTTGAAATATTCCTAA TGATTAAGTGTGTTGTTACTAAATGCCTATCCAACGAAAAAGGAGTATTA ATATAGAGGGGAGAGGAGACACCGGGTGGAGGGGGGCACTCAAGGTAAAT GACATACCAGACGTGCGGCACTTAAGGGTCGGTTTTTGAGGAGACAACCC AATCGAACTACATGTAACAAACTATTCATGGACAGTCTCCTGAACTTCAA ATTAAAGCCTCTTAAGATTCTTTCACCGCTATTTGTTTAGCCAAATTTGA TTAGCCAAATTTGATTAATTTCTCCGTTATTTTTTCTTGTACTTTCAGCT TCCATTGACTTTACTGCAGACCGCTCAAAATCATCCAATGGTATTTATGT TGCATTTTCTCTCGAAGGTTAATTCAGCGAAAAATTCTGAAAACCTGATT TGCGAAGTTTATTCTTCTTGAAAAAAAAAGAAGTTTTATTATAGCCGACC AATTAGTGAAAATTAGTTGACAAAAGAAACAAGGAAATTCGAAATTCGCG AAAGTTCTTTCCCGCAAGATATTTTGAAAAGCTCGATTTGCAAAAGTTAA TTTTTACGAACTGCCAAAATGCCGCGAATTTACTCGTCAAAGTAAAAAAC GAAAGGTGGGGTTAATATCTTGATTTTAGGGGGTGAGATCAACACCATGA AGTACACTTCCTTTGTTTAAAATTGTCACTATATTTTTGGAATATTTTGT TGCTTTAAGTTGGTTGAGTTGAAAAATGGAGAAACATATAACGGACATTT GGTCAGCTGTGATAATTGGATGAATATCAATCTGAGAGAAGTTATTTGCA CATCAAGGGTAAGGGAAAAATTGTGCTCAAGTAGTATTTTAAAGTGTCAT TCATTCTGATTCATTAACCTTTGACTTTCTACCAACTTTTAACCAAGAGT ATCCAGAAAGTATCAACTTTGCGCCTGGAAAAAGTTTGCGGATTGTTTTT TTCTATGAATATGAATATTTATTGCCAGCTATTATTCGTAGAAAATTGGG TGTTAACACACGTTTTTTTCTTTCGTTAAGAAACACACTTTTAAGAAACA TGAGGCTCAGAATGCCTAAAAACTAAGAAACATCTATCAAGCATGTTGAG GCTGAGAATGAGAAAATAAATTTTTTAATTCGGCTTTTTTTAAGAACCTT CCAATCAAAATAAATGTTTTTTTTCTTTGCATGAAAAATAGGCTGATTAT GTCAAAAATTTAGAAACATGTAAGAAACATTTAGGCTCAAAAGGCCGATT TCTTAAGAAACATCGAGGCTGCTTGGTAAAACTAGTTTCTTAAAAAAACA ACGTGTATTTAATAAAGAATGGTCCTTTTAATTTAAATAACTACAAGAGT ATTGAACTCTGAATGAAGTTGCACAGTCCATCAACGACATCTTACGTTTT ATCCTTCTGTTTCTCCACCTTCAGGACGGTGATCGCTTTTGGAGGATGCC AGAATGTTATGTTCGAGGAAGCACTGTCAAATATCTACGTATCCCTGATG AGGTAAGTACTGAGAGATGGCTGTACATTTGATATTTAATTTGTTGAATA CAGCCGTTTTAAAAGTACAGTCTCTTCACAAAATTTACTCCGTGAAATCT GTTTGTGAAGCTAGATTATGCGCCATCTTTGATAGATAGACGTCACAATA ATGCTTTAAATTTGGAAGTCATTTCAATCAAAATACTTAGCAAGCAAGCA AGCAAGCTTCTACTGTAGTCTACTGCGCTTTACCTTTGTCGTCTTTTAGC AAAAAATAGTTCTTTATTTTGTTTCACTTGCCGTGGCTTAAGAAAGAAAG AGAAACTACAATCATGGTCGAAACATATTGAGGTTTTAGTGTATTTTCAT GTTTTTCACAATTTAAAGTTCGGGCAAGAAATGCTATTTTAGCACTTCCA CTTTCTTTCATTGAATATTTCGATTCAGGATGGGTTCGGTGGCTCCTAGG CTTTATTCCATGCCTTTTTGGAGCAAATTTTGAGCTTTTGAATCCTCAGA TCCTAAGGTCTTAAGTGTTAAGTCTCATGTTAAAACTCTACTTTCCAACT GTAGTTTAACGCGCTTAAAAATCATTTGTGGTGTTTAAAATTTCGGAGGG AAATCCCCTTTGTCTCAAATGCTTTGTCCATGATTGTAGTGGTTTATATA TGATATCTGTATTTGTGTTATCCAATTTATCACAACTAGCTCATTAAACC TCATTTAACAGGTTATTGATATGGTGAAAGAAGACGCCCTTCAAAAGAAC CGACAACGCCATCATAACGCCAACAGACGAGGTGGTCCAAAGGGCGGACG CGGTGGTCGAGGTGGACATCGTGGTGGTCGTGGTGGCGGCAGAGGGCGCC CTGATAATGCTGAACGATAATTTTCATCCTGAGAATTGCTTTGTTGTTTA TTTTATACCGTTGTTGTTGTTTTAGGGTTTCACGCCCTGGTATGATTTAT GGGACGCCCCTAACGCCTGTTGCTTCAAAGAGACATGTATAAATGAACGG CCCTTTTAACGGCAGAATGAATTAAAAAATTCATCTTGATGTTTCTAGAT ATAGAAAAACTATCATAATTACTATTCGTCCTTAATCAAAAGCATTATGA GACGTTTTGTACTGGTTGAAAAGACCAAACAAAGTTGGAATTTTTATACC AGAATTTATTTGTGTTTTTTTAGCTCTTATAAATTTTAGGGGGAATTTTC CCTCTTTTTTTAATTATTTAAATCAAGAAATTGAATTTTTATCAACTTGA AAACTTTAAACGTTTCAATTTGTCTATACCTAGAAAATAAATAGTTTTTA CAATTCCAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00073413TCONS_00073413Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00073413-proteinTCONS_00073413-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_91supercontigscaffold_91:392060..397118 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
EXOSC6exosome complex component MTR3 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
47.01 44.44 31.3 30.09 27.54 22.28 28.52 33.51 31.77 29.7 23.71 21.97 18.85 21.56 23.53 25.48 38.18 33.78 12.06 13.27 24.3 24.93 65.39 54.14 26.26 28.7 27.48 23.31 32.72 34.44