XLOC_045419 (gene) - C. hemisphaerica

Overview
NameXLOC_045419
Unique NameXLOC_045419
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_88:284597..295329-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_045419 ID=XLOC_045419|Name=XLOC_045419|organism=Clytia hemisphaerica|type=gene|length=10733bp|location=Sequence derived from alignment at scaffold_88:284597..295329- (Clytia hemisphaerica)
TCATTTCGATGCTTTTGTTTCATCAATCAAGACACGTTCATGACACTTAA CAAGAACATTGTAAATTTAGACGTGCTTTCTTATTGGGTTAAAAGGTACT TTTAGGTTTTTCTGGTAGTAATTGTATTTAATAATAGATACTTTAGTACT CTATTAATCAGATAATACACGTTCTTTTTTTATTAAGAAAATCCAAAATT TTTGAAACCTTGGGAAAGTTTTTTAAAAAAGTTGAAATATATATCCTGAA AAACCCAGCCGTTCCTTCAACCCAAAAAGAAACTATTCTTGAATACCAAT CTTTACTTTTCTGTAATTATAATAGTATCAAAAAATGATGATCAAATTTG CGTTGCTCACCTTCTTTGTTTCGTCCAGCTTTGCCGATACACTTGGTAAG TAATTGCTTTTTTTATCATCATCATATGAATGGTGTTTTCCCAATTCATC ATAAATATTGTTAACCTTTTGGGAGAAATATTATTCTGAAATATTCTTAC GGTATTGTTAGCTTTGGATCCAATCTCAGCCAAAATCTAACATGTAATAC CTAGGTCAGGCAAAAATTTGCCATACTGGGGAATAATTAGCAATTTAATT GTAAAATACTTTAAAAATGGCATTTTTAGGTTCGGTTACCAAATTCTGTG ATGTTGTTATTCTAACCATATTCTTAATTCTTTAGCCAATCTCATCATAA ACATTCTTATAAAGTATATTCCTATGAAAAACGTGTATTTGCTTACTCAT CAATTTCAATTTACATCCCTTTTCACACTGAATTGAAAGGGATGTGGAGC AAGATTGGTTAAAAAGAAGGAAAGAAAAACAGCTTTATTCAGCACGAAAT CAAACACAATATAACAATAGGAGACAACGACCTGAAACAAAACTATAATA TAAAGCGGGAACACTTATGTATAAAAACAAAACCTTAGTTTATCGTTACT TATGAGGACGATAACCTATGATAATTCCATCCTCAACGAAAAAATGGCAA TTTGCAGCAAGATTTTAGCTTGTCTCAAAAGTTGAAAAATAGTTGTCGGC CAACTTTTAGTGGACCGCTATGAGAAGGCACACTGTAAAAGTGGGATGGG GGAACCAGGGAACCCTAAGTGGGAACCCTAAGTGGGAGCCCCAAGTGAGA TCCCTAAGTGGAAACCCTAAGTGGGAACCCTAAGAGGAAACCCTAAGCGA AAACCTTAAATGGGAACCCGAAATGGGAAACTTTAGTGGGAACAATAACA TACATACAATATAAAATCTTTTTTCATTCCTCAGATTGTGGAGGATCAGC TGGAAGTGTGAAAATCGCTGGATGTTACAAAAAACCAGCTGGTTTATTTA ACAAAATACTGATCAGAAGACCAATCTACCAAGAAGGATCCATTAAAAAG TAAGTTTAGTCAGTTCAAAATTGAGCAATGGAACATTCTGCTTACAAAAG TAGTCAACTCATCCTCAACTCATGAATTTAAAGAGAACCTTAGTGCCTGG AAAGCTAAAAAGTTTGAATATGATTGAACCCAGCAGGCACACAACGTTGT TTTAACGTCCATCTAACGTCCACAACGTCCATATAACGTTAGATGGACGT TAAAACAACGTTGTGTGCCTGCTGGGAAAGTATCACTATTGTTGCATACC TGTCTATATCATAACAATGTAATAATTAACCCAAAATGTATCAGTTATCT GGCAACCAGATTCCAAAATTTTCATCCGACAGCTAAAGCTCTAAAGGTCG GGAAAATTTTCAACATCTGGAAGGTTTAGATTACGGAATTTTGCAAGACC GCGTCAAGGATTTTGCAGTGGGAGGTCTAGTAACCCTCCCCTTCATTTCG GAGATTGGCAGGTCTAACTGAAATATATTTAGCTTTACGGGCAAGGGTAA TTGAACCTTACTGGGTATGCGGCACATCAAAGGCCGACCATCATTTCGCT CCGATGGAAAATTAGCCCGCTTATTTAGAGCTTTAGCGTGGGCGGCCGCC AATCTGTCATCCCGGAATATCAAATAATTTATAAAGGTTCATGTGTCTGC ACGGTTGCCTACGAATTTGTCAATGTTATTGTTATGTTATGAATTCATTT TTAGTCCAATGCTACCTTAATTCTATTTAAATAGAAATTAATAGATAGAT AGAAAAAGGCCTATAGACCTCTCCATAAAAGAACTCTACTAACCTCTTAT CCCCCACTAGATTGCCATTTAGAACTGTTGAGCCAGTACTCTACTGTGTT GAGCTGAAAACAATTTGAGACCTCCATTTATTAAAGAGCCTCCCCATTCG TCTTCGCTGTTTAGGACCTTCAGTTTATATAACTTGTGAAAATTGTGGCT TCAACAATTTTCAACGGTTCGCTTTTAAGTTAAATTAAAATCATTTATTT TTCATGCGAATGTATTTTAGTTTGGCTTGTGATTGTATTGCTAAAGCAAA GAAAGAAGGTTCTAAAGCAATCGCACTCGGTGATTACGAAGAGTGTCGTG GAACTACTGACACTGCAAAACTCTCATCCTTTTTGAAAGACAACTCACAA GTTAGCAATAAATGTTTCAACGCAAATTACCAATCATGCACAAAGGGGTC ACACTGTATGGGAGAAGCGGGCATTGTTTATATTTATTCCACTGCAGGTT AGTATTGACTGATGCTCCTATCGTCTACACAAGGTCATTTATTTTGCGGA CCCGCATTTTCTAGCTCATTGACGTCCTCGAGCAGTGGCGGAGGCGTGAG ATGGAACGCTGTACTTACTCTAAAGCTCCCAGTAACTTTCCGCTGAGATA AGATTACTCAATCTAAAGCTCTAGTATAGACATTCGGCTTTCTGACTTGT CATACCAACTGTTAGAGTAGACAGAAATTGGGCACAAAGATGGCAGTTAA GATCTTTGCTTGGAAAAGATTGAGAGAAGTCATTGCATTGACGTCTATTA AAACACCCAACTTCTTTGAAAATGGACTAAAATTCTCACAAAATGGTGAA AATAAGAACATAAAAACACTTTAAGGCTTAAAATAAAAAGTTAAGAACAT CTGAAGACTTCAAAAATTTCAGATTTCCTATTACAAGTGTGTATGTATTC CCAGCTTCCATAAATTTATTTTGCATCAAGGCTGACAGATTACCCTTGAA TGAAATCATTTTTAAAAGATTTATCATTTTCTCATATTTTCTCAGTTGAT GGCGGTTGGGGAGATTGGTCAAGCTACGGAGGCTGCAGTAAAACCTGCGG AGGTGGTAAAAAAATTCGAACACGAAAATGTGACAGGCCAAAACCACAAA ATGGCGGAGCTAACTGTGTAGGAATCTCATCACAGGCTACATCATGTAAC ACAAAAACATGTGCAGGTATAGCCTCAATCCTCAGTTGTCGCAGTAATAT ATTAGACTAATACCTCGAATAGATTTTGTATCGTAAATTATAAATTGATT TTTTACTTATAGATCCATTATGGAAGCAAACGTTCGAATCTGTGGGTGCG ATCCTTTACATAAATCCCCAGGGGGGTACTAGGTTTGCGAGGTGACGGGT ATGTCCGAGCCGAAAATCGAAAATCGACCCTTTGAACGACAAAATTTTGG TGATTTTGGGACCCTTTGAGAGACTTTTTCCAAAATTTTGGTCCATTTTT TCCAAATTTTGGTTTGATTGTCACCAAATTTTGGTCANNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCGGACATAAATCGCATGTT TGCTTCCATTATGACTGAAATTACGTAATTTAACAAAACATGGAAAATCT CTCTCTGTCAGCCTCTGTATGGAAAGGGCGCAAAACTGCAAACTGAATTG AAAATTTGCTGCTTTCTTATCATACATTTGATCATGAATGGGATAACGAC TTTATCTTACACATCCTGTCTCACAGCCCTGCAAATGAGGATAAAAAATT GCTACTGAAATTCCAATCGGGATGAAAATTCTATTGTTTCAAGGTTTGAA AATCTAGCGGGGATTGTTATAATCAGTAGTCACTATGACATAAACCATAA GTAGTATAAGAAAGCCGCGGCTGGAATGATAACATCTGAATTTCTGTTGT TCTATCTCTGTCGTTTTTGATGACCATTTGTTGAGCAAGAAATCAGTAAT GTAGCATCTTTAATGGTAAATTTTGTTGGTTTGTCGTTAATACTTACTTC TCAGTGCGTTTTATACATTAATGGTATGTCCTTGCATAATACACTTGCAT TATAAAATCATTGTAAAGGAAAGATCAACAATAAGAAATTTAAACGAGCA CAAAATGGCTGGGCTAAAAGAACTCAAAAATTAGTAAAGTGCCTTCGAAT GCCTTCACAATTTTTCAGTGAAATCTTTTTAGAAATCAATGAAAAAGTTC ACCAAGACAATACTGTGAAAATTTCAAGCCAGCACCTTCAAAATTTATCA TTCAAACTGACAGGAAAGTTGTCATCTTGAATATAGTTCTTATAATTTTA ATTTTGGCGAAAAACTATCGTTTCCACAAAATACCCCTAAAATATGTCCA AAATTAGTTCAATTGGGTACAGATTCAAAGATATCTAGCAACAAAAAAAC TTTTTGTGAAGGAAAATAAAAGAAAAATTTCAAAAACTATCTACCAATAA TAAACTGAGCACTTCATGTTCTTATGAAGGTCGGAGACAGACATAGAACA GCAATTAACTGAAAAGACAATGCGGTACATATTCCAGCCGCGGCTTTCTT ATACTATGCATAAACTAAATAGGGATTTTATTTTTTTTCTATAAATCGTT TTGGACAGTTTTAAGATTGTTCGAATCTAGAGTGTTTTTCGATTTTTTGT AGAACTGTTTTGGGATACACGTTTTTTTTTTAAGAAACACGTTTTTTAGA AACATGAGGCTCAGAATGCCTAAAAACTAAGAAACATCTAAGAAACATGC CGAGGCTGAGAATGAGAAAATAACATTTTTTAATTTGGTTTTTTCAACCT TCTAATTCAGTCTTCCATTAGGCTGATTATGTCAAAAAGTTTAGAAACAT GTAAGAAACATTTTAGGCTCAAAAGGCCGATTTCTTAAGAAAAATTGAGG CTGCTTGGTAAAGCTAGTTTCTTTAAAAAACATGTAGGTCAAACCTTTCG ATGTTTTGTAGAATTGTTTTGAGATAGATCAAGCCTACGCTAAACAATTT GTCAACTCATCTTCATCAATAACAAAGTCCTCAAATTATTTTGCTTTTAA GTTAATGGTAACTGGGGACGATGGTCAAGCTACGGAGGCTGCAGTAAAAC TTGCGGAGGCGGCTCTAGAACTCGAACAAGAAGATGTGATAGCCCAAAAC CTCAAAATGGCGGAGCTAGCTGTAAAGGAAGTTCAACACAATCTGGGAGA TGTAATATACAGAAATGTTTACGTGAGTCNGGAGCTAGCTGTAAAGGAAG TTCCACACAATCTGGGAGATGTAATATACAGAAATGTTTACGTGAGTCCT GCATTACATCATTTTTCATAAGAGCTCGGGTAAGTTATGGCATGTCTCGA TGTCTCGAAAACTGAAAATTACCATAATTTTTAGATCGCATTAGTCGGTA CAAAACGGACCAAACAAGAATAAAGCGTACTATGATGAAGTTTCCAACCT GGTGTGTAACCTAATATTGTTTTTTTTCGCTGATTTTTTATTATGACGTC ACAAAAACTGGAAATTTAATTTCTCAAGAATTGTTTATCCAATTGTCGTC AAACTTTCACCAAAGATGTATCTCACTAAAGTCGATTATTGAAAAAGAAA ATTTTTCGAAATTTTGATGACATCAGCAGAAATTAGTAAAAACGAAAAGT CCTATTTTTTGCTGACGTAATCAGAATTTAGACAGAAAATTAGGTTACAC ATCAGGTTAGAAACTACATCATAGTACTCTTCATGTTCAGTCATTATATT GGTCGTTTTCTGCCGGCTAATGCGATCTAAAAATTATGGTAATTTTAAGA CATGTCATAACTTACCCGAGAACAATTTTATAAAGAGCACGAGGCTGAAA ATTGGACAAACCTAAGAACAAATTAAGAATATCTGAGCCTCAGATTTCAG ACAGCACTGGTTTAAGAGATTTTAACTGATTTTAAGCCCATTTAAGTTTC TATAATGAAACTATTGAGAATATCATAAGGACGTTTGAGCCTAAATATTT CAGAAAATGAAGAAGATGAGGGACAAAATTTACTGGTTCTTATTAAAAAG CGTGTAACGTCTTTTTTATTTTGATTTCATGAGCTATTAACATTAGTTAC ACCCCCCGAACAGAAACAGCCCCCCCCCCCCGNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCGAATAGGATTAAGTGC TTTTTTAAGGTAGGAAATACACGCTTTCTTAGCAAGGCTATATAGAAGAA CATGATTGGCCAAAATAATAAGAACAAATTAAGAAAATTTTAAGCTTTTC ATGCTCTAAAGCACCTGATTTCTTAGGAATATGGACAAGAATATTGACAA AAATAGTGAAAATAAAGAGATACAAGGCTTTAAACTAAAAAAGTTTAGAA CAACTGAAAGTTTCAAAATTTTTGAATGCTCTTTTTCATAAACAAATTTG GATATTTCGAATCTATAATAAAGGATATTCTCTGAGTTGCATAAGTTTGC ATGTGGGGGGGGGGGGGGGATTTNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNGAGGGGTAGATTTCGGTTTTCACGGATACTCCGTA GAATTAAGCCGTTTAAAATCCACGCGATACAGTAATATTATTGTTATATA ATAATACAATAATCGCAAGAGGATATTATCAGTTTGTATAAAACGATAAC TTCCCTTCCATTATTTTTTGGGATATGTCTCAATTAGTCGTCTAGCATCG TAAATTTGACTTACCCAGCTGGCACACAACGTTGTTAACGTTCATCTAAC GTTATATGGACGTTGTGAACTTTAGATGAACGTTGAAACAACGTTGTCTG CCAGCTGGGGTACACATCAAGAAAAACATGTTTGTATTATTTTAGCTAAT GAAGCCTGCACTTGGGCATACACAAATTGGAATGATGACGGAAAAGGCGG CGCTGTTTATTTGGACAGGCACGACGTTCGATGCAACAACGGTCAATATA TCAAATATATGAAATTAGAAAGAAAAAAGGCAGGCTGGTTCAATTATCAA ATACGTTATAAGTATATATGTTGTCAAAATATGGCTTCATGTTCAAGTGT TACTCATTCGACTTTGGATACCTATAATGGTGGTTTTCAAGGAAACGCTG TCTACTTCGATCGCCAAACAGTCAGTTGTGGCAGAAATGGTTAGTATGAG AAATATATTAGCATGACAGACATATATAAATGCCGGACTCCACTTTCGTG CGAAATGGGCGACAGTTTTTTTCTTAACCTTTTTTGCCTGAAGAAAAGAT TACGTCATAAAAAAGTTTTGCGCAAACAAAAAAAGTTGAAGGAAGTTCTA CTTTTTTCATCCGTTACGTCAATTTTGACCAATGGGATTGCTTCATTTTT CAACCGACCAATGACCTTACAAAAACGTCAAAAAGTTTTCGCTCATGTCG CTCGAAAGTGGAGACCGACCTTAAAAGAAATTGAAGCACAGATGATAATA ATAATCGAAGAAGTGAACGTTTCATTGATAAAAATTTCCTTTAAAAATCA AATTAAAGAGCATCGACTGTATTTGTATGATCTGTTAACAAAGTGGATAG AGCGATAGAATTCTTATCGTCCGTCTCCACAGGTTGAATTTCAGAGAAAA CCTATCGTACTCATGGTTTCTCTAGAACGTTAATTTCTCTATATAAAGAT TTCAGTTTTAAGTCGTCATTGTGAAAATTCCGGTAGCCTTTATTACTGTT ATAATTAAGATTAACTTTGTAAAGCTTTTTAAATATTCCAATACCACAGC TTTGCAACGGGTCAAACTTGTGAGACATGGCAACAATATTCGATATGATT TTACATGCTGCAAAAAAACTGATTCTACACTAACCACATCATGTTATGCG TCAAATACAGGTATAGATCCCAGATGGCACACAACGTTGTTTTAACGTTT AAACAACGTTATTTGGACGTTATGGATGTCACATGGACGTTGAAACAACG TTGTGTGCCAGCTGGGATAACACAGTAAATGATCGGTTATTCGCAGGTAG ATATAAGGAATGGGTTTGGAAAATTTTGAAGAACCTTTTTGTAGGAAATA TGAAACTCGGAAATTTTAAGAATTCGTTATTTATGTCTTCGTATCGCGTA GATTATCGATTTTATATTATCCATTTGCAGGAAATTCTAGCCCTTTTTGA GAAATTAAGTCCCTGCAACATGATCTAAAATCTGAAATTAGGTCAAAGTT CCCAACAAATAGAAAGAAATGGGGGGGGGGCAAAAGAGACCAACTTATTC ATTTAGGCTACACCTAAATTATTAGTAACAATCAAATTTAGCAAAAAGAG CATAGCTACTTGCTTCAAAAAATCAATCAATCGAAAGAGTTCAGTAAGGG AAAATTTTCGTTGCTTTGATTAGCTGAAAATTTCAAATTTCAATGATACT CTAGGCGATGGTGAAAAATCACTTACTACGATTGATTGATTGATTTGTAT ACGAGAAAAAGTTTCTAAAAGATGTAGAGCCCCTGTTTAGCGCCTCTGTA AAAGCCCTGGAGACACCCATAATTTACATCATGGACCAATTTAATAATTT GACAAAAGATAACACAATAATCACAAAGTTTCCGCTTTTAAAGTGATTTC CAGTATTTTTGAAAAATATCTGATACTATCAAGCCATGTCACTCATGAAA ATATCTTTCAATAAGGCCACTCAGCTGGCACACAACGTTCTTTCAACGTC AATTTAACATTTAACGTTAGATGAACGTTGAAACAACGTTGTGTGTCAGC AGGACAAGCCTAGGGCGTCAGTCGAGACATGATAATCAGAAGTGATTATA TTTTCATTATTTTTTTCTTTGTCATCTTGAAACATCCCAGATCCGCTGGG ACCCAAGCCTCCCTTAAAGACTTGGCAAAAATTCTTCTCCAGTAGAAAAA TACCCTGGAAGTTCAGTCCCATTTGGATATTCAATTCGATTTCATCCCAC TCGAAATTTAATGTTTAAGAATTGCACTCCAAAATCATCTGCACTGGATT TTTTAACCTTTCAACAATAGAATTTCTATCCCAATTTGGATTTTGATAGA AATTTTTATACGCACTGATGAAAAAAATCTATCGGGGCTGTGAAACAGGG GTGTCTTAAATGTTCTTTCAATTTTAGGTTTCAACGATGATGGTCGTGGC AATGCAGCTTACCTTGATCGACACGCTATAAGCTGCAGTAACAATTACTA TCTTACATATTTTCACTTGAAACGGAATTCTGCTCACAACAAATATCGTT ATGATTACCAATGTTGTAAAATTAATCCACCATCACCAAGAAACTAAAGA ATTTCTGAAGAGAAATTAGGGATAAAAATAGAAGTCAGGAAAATAAATAA AACATAATTTTATTAGGAAAATATATAATAAATCATTTCCCTAGCGAAAG TATTTTTCAGTATTTGTTGTTCGCATATATGTAATTGAAATGCGACTAAT TGTGAAGATTCGAAATCTGCGGATTTGATAGGTGTACAATAGCGCACCGC GCTGAATCTAAAAATAAATTTTATTTTTGACATAATCAAAAAATAAATTN TTGTACAATTCATAACTGGGTATATCTGGGAGGCAATTACGAGGCAGGTA GATCAGCTCAAAATTACATATATCTGCGCGTGTGGTTTGATTGGGCGTGA TTGTTTTGACTAAAACTGCAAAAACATTTCAAATTTGTTTCGTTTTATTA GGTCACCTACTACATAGCCATCCTAAACATTTAATAATTTTATTTATCAA AAATGTATTCGTTTATTTTATAACTATTTTAAATATATGATAACAATAGT TGACAGTTGGAATATTTGCAGTCCTCTTTTTAAGCAGCTTTGACAATTAT TGGAAAACGAATGAATTGTTTAGATGGAGGCTC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00073220TCONS_00073220Clytia hemisphaericatranscript
TCONS_00073219TCONS_00073219Clytia hemisphaericatranscript
TCONS_00073218TCONS_00073218Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00073219-proteinTCONS_00073219-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_88supercontigscaffold_88:284597..295329 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.04 0.04 0.04 0 1.01 0.76 74.98 74.45 193.43 89.54 181.76 173.13 9.21 6.26 57.99 61.23 0.7 0.25 6.39 4.43 0 0.05 0 0.08 0.13 0.21 0 0.05 0.04 0.02