XLOC_045418 (gene) - C. hemisphaerica

Overview
NameXLOC_045418
Unique NameXLOC_045418
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_88:223568..232493-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_045418 ID=XLOC_045418|Name=XLOC_045418|organism=Clytia hemisphaerica|type=gene|length=8926bp|location=Sequence derived from alignment at scaffold_88:223568..232493- (Clytia hemisphaerica)
GTATCTTTAGAACAAGAATTATACTTAGCACAAATTCACACGAAGAACTG
CAACAAAGTAAAACACGACATAAAAAATTCATAAAAATCTGAAAACACCC
ACGGCACAAAAGCAGAAGCAAGAAGAAAAGCAATCAAAGAAAACAATACA
GAAAAAGATTCAAAGATTCTTATTGGTTTAAATTATTGGCATTAATTATT
TTGAAGAAGATGCATAAATTATTTATTTTATTGATTTTGATCGCCATCGC
TACCTCTTTGGTGGAAGGAAGAAGACCCAGAATACCCAGAAGAAAACGTC
AACACCATGGTAAGTTTTTGGTTAAAACATTGTTATTTTTATCAGGGTCA
TCGAGGCAAATCTTAAAAGGATTTCGGTTAAAACATCCTTAACCGAGGTT
GGATAATCGAGATGAATAATGAAATATCGATGCGTTTAATAATTTTTAAA
CGTTCACCTTGGAAGCGGGCACATAACGTTTTTTCGTCTAGTTGACCCCC
GTTGGTCTGGCAACTTGGTGATTGCTTGAAAATTTAATTAAATCACAGCG
AAGAAACCATAAAATCATTTATAAAATGATAAAAAAGAAAACTTGACCCT
AAATGAGTGTGGGCATGAAACCGTAAAAATATTGTAAGATTTGTAATTTC
GTAACTTCTTAATCTTGTTATTTTTCGAAATTTTCTATGGCAAGTTTGTT
TGACATACGTGACATAGTACCATATCATAGAGATAACAAGATTAAAGAAC
CCATTCGATAGTGGCATTTTAATAAGATTGCTAATCGTAACATTAGGGAG
AATATTAAATTGAAAAAGTTTGTAATACCTTTTTAAGTAGATATGATAGG
ATGTCTTTTTAATGCGTTCTGAAATTGATACAAAGATCAGGGTAATCCTG
TTAAAATCAGTTGTTATTTTATCATTTTATCGCTGAGACAGGATATTTGA
CCAATAAAAGATCTCGGCTTGACTTGCTGATTTTAGGCTCCACCCATCCA
ATTTTCTTTCGTTTTGGAAAATGCGAAAATGAGATTAAAAGAGCTCAGGA
GCAGGATATGATATAGATAGATACGAGCCCTCCGAATGCATTCGGGATTG
GTCCTACCCACTAAGGAGCAGGTATCACGGCGCTGACAGACACTGCGACT
TGACAGACGCGAGCTACCAAGCCATGGCGTATACCATGACACTCGAACGA
CACTGGGAGAGCGGTGTTCACGCGAGGCCGAGCCTTATGGGTGCCACGGG
AGGTCAAAATGTCTGTCTAACCTACACATACTCTTGTATCAGAGTAATGA
AGCAGGATATGAAACCAATCTTATTAAAAGATTGTGACATTTAATTTGAT
GCTGTTTTTTTCTTGGATTACTATGATATTTGGACACAATCATAGATAGA
TTTAATAAAACATCCTTTAATTCTATGTTCAATGTGCTTGGCAGGTCGAA
TTAAAGAAACACTCTATAATTCGACGTCCTACCATTCGATAATATTGAAA
GCCATAGTCAATGAGAAACCCTCAATTATTCGATACGCTCCCTTATTCGA
TGAATAGAAAATGCCTTGAAAATCGAATTAGGGAGAAACAACTGTAAAAT
GATCAGTCTGTAGCTCCGTGTAGATCCCTGGTGTGGATTTTTATCTCAGT
AGAATGACTGTTTCGATTTATTGTAAAAAAACGTCACAAAGTCTTCAGCG
ACCATAACAAAATAACAAATCAAATTTAAACAACAATTTCAAATCGGATC
ACATTGCTCAAAATCGGGATTATCTAAGTCAAGGTACTGTGTATCGTAAA
GAAATTTACACTTTTTTTATCAAATCTAGGATTGCGCGCAGTCAAACTAG
GGACATCAAAACAGTGTATTGAATGTTTTCATAATACTCTTTCAAAATCA
GTGCAGAGGGATCATGTTAAACAGTTAACTGGGCATTTTTTTAATTGGTT
TTACTTGCTGGTTTTATAAGCCAATCACGTCAAAGAGGTATTTCAAAAAT
TATTAAAACAACTTGGTAATTGTTTTTGATTATATCACGACTTTAATGGG
CGAACATTTGTGGTCGGTTATAAATAGTGTACACCTAATAACCAATGCCA
ATTTTTGCTTTTACAAATCTAAAACCCACCCATTTTTAAGAGCTTAATGG
TCGATTATAGTGAAGCTAAAATCTTGCAGAAAAATAACCCAGCAATTGAC
ATTGACAACCAAAATTCTAAAGAAGGCCACAGCAAGGGTGCAANTATATA
AAACACAGTTTGAATTATAGAGCTAGAGAATATACAAACCAAAATTGGGC
GTTTTGAATATTCCATGAATGTCGGAAATAAAATCACATCTTTTGAGAGA
TCTAAACTGTTTAATTTTTTTGAAAACTAAAGAATTTCCATAAAATTTCA
AATTTTTGAAAAAGTACTTGAACATTTTTTGAAAAAAAAACCATAGATCC
CCGAGAAACTTAAATTTAACCTTGAGATAACAAATTTTTTTTCTTCTTTT
AGATCATAATTACAAGCCATCCTTCATCAAAAGCCCTCTCATTTTGGAAC
GTCATGAAAACACGAAAGAAGGCTTCCTATTGGATGATATCAGTCAATAC
GCGAAAGACGACGAAGGCGATCAACTCTTGTACAAATTAGATGTAGCAGG
CGAAGAAATTTGTACTATCGGTTTGACGGATGGGAAATTGAGGCTGAAAA
TTCGACCTGATAGAGAGGTTAGTAAAGCTTTATTTTTCTTATTTCATTGA
TTGGGTTCATTGCATACGAGATTAGACTAGACGAGATTTTTTTTTCGTAA
CCTGAAAGTGTTGGTACGTGCATAGAGGTATAAAGAAAGACAGGAGATGA
ATTTGTCGGTAATTGGTCGTTAAAGTCTTTTGATTTCTTTTATGTAATAA
ATCAAAAGAAATTCTAGGCTCGCCCNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNATATATGAGATTATGAGCATGCATACCTCGTAATATTTTTA
ATCGTAGGGCGAGCATGGTTACAATAGCATACTTCTCCTGTTTCTTTATA
CCTCCATGGTACGTGATTTGTGACATTACAAAAACAGTGTATCGTTACCC
AAAGAAAATCAAATATCAATTGAAACAATAGAAGATTCCTTTCAGCAACT
CATATAGAGGTCTCGGTCAGAATAACACCCTCCTACTACTATATAAAGCG
TGCCAATTAAGGTATGCCAAGTTTTGCGAAAATAAAAAGCATGGGTACTA
ATGTACATATCAATAACATGGAGATAAACGTACTCCTAAAAAGTATCAAA
CTGCGATATAAAAATGCAAAACTATAATAGAGCTCGCTGCTAAAGCTTAT
CAAATTTCTGAAGCATTTTTCAATAAAACAAAGTAATATAATTTTGGTTA
GAAAAACAAACAGTCCAGGAAGCAACAGATTCCGTAAGGGAAAACCGGAT
CTTTAAGGCGGTCCATGCTTATCTTAGGGCAAACACCCACCTAAAATCCT
AAAATCAGGGACTTTGGTTTTGTATGGCCAATCATCATTGCCTTATTCTT
ATAGAAGATTTTCCTCTCGAACACATACTATAATATAAAGGGAAGAAAAT
CTAAGTGCTAAAAAGCTATTTTATTGCATTCGCAGTAGGGTATATAGATT
ACCTATATAATTTTCCTACTACTCACTGCCAAGCATATTTACATACAAAT
TGCTTATCCTTGAATACTCTTTTGATTGAAAACGGTAGGGCAGTTATCTG
AGGAATTCCTTAATTCTTTAACCTGTATGATGGAGAGCTTTATAGTTTCC
TTATACGGAATAAAGCTTAAAGAAATGCTCTTCATCATAGTCCCGCATTA
GCGTAGCTTTGCTATCAAACCGTGGGAAAGGATTAGATCAAAATAAAATT
TTCATAATAAGAAAATTTCTTAAAGGTATATATGTTTTTAAATGTTCAAA
ATACTTTTTAATGAAAAAAATACCTCTATAACGTAGTATTTAAGAAGTGA
ATCAAAGCTGGTTCCTAATCGATATCTTTTATTCCAGAAGCTGTACTTCA
TTCAGAACACGATTTCATTAGTTAATCAAAATATTCGTTGCTTTTATAAG
AACATCAAAAAATTTTGAAGCTTTGGGACATCCTTAACTTTTTGAGATTT
GCTACGCTTCAAGAATTCATGATTGCGACATAAAGCACTAAGAACCTAAA
CTTTAGAGTCGAAATCACTTTTGCCTAAATAGAACCTTAGTCTTAGATTT
CGTGACAAGCTATTAGTATCATTCAGATAAGACCTTACAAATTAAGCTAA
TCAGCATAGGATTAAGTTTTAAGTCGTTTTAATCTTTCCCTCGCGTTTTA
AAATAGTGGAAAATGCCGTAAACAGTACAAATATTACTTGCAATTAGAGC
ATATAATTAAAGCTTGGTGGCATATAAGATATGCGTGATAACGTATACCC
CACCCTTAGTGCATGTTCAAAAGTAGTCCCAATTTTAACATTCAGTTTAC
AATTTGATTGGCATATCATTCAAATAATCCCCATCTTCCGTTTTTAGCAA
AAAGAAGAATACCGATTCCAAGTCATTGTTTCCGATTCGTTCGAAGGAGG
TTACGATCGTGAAGCTTTCCTCGATGTTTATCTTTATATCCTCGATGAAA
ATGACAATAAACCGATTTTCAAGAATACACCTTATCATGTGGATGTCTCA
GAGGTAAATCTCGGGTTAATCGGGTTAAAACGGACGACTTTGGTAAATAG
GAATACTATTTACCATGTTAATATCACGGAGTTGTAGATCGGGATAATCG
TATTAGTATTTGATAAATTTTGGGAACGTTAAGCTGCTACTTAGATTCGA
GTTGTCGAGGAAAAATCTTGAGCTTATAGCCTACAATATTGGAATGAAAT
TGTCATTTTAAAGAGAAATCGATTGCGAGTGGACGCTGTTTCACTTCATT
CAAGCTCATTTAATACTTTGGTCTATAAGTTTTAGGGAGCATTAAGTTAA
CTTAATTTCCCTTTTAGGCTACATCGATCGGTAAAACATTAATTCGCATC
TTTGCTTCGGACAAGGATGCCGGACGTAACAAAGATATCCGGTACGTTTT
CCGCAATAAGAACGGTGAAGACCCGGAAGAATTTGAGTTAGTACCGAACA
CTGGTGAATTGAAATTACGGGCACCCCTTGATTATGAGAAACAGACATCG
TATACTTTGGAAGTTATGGCTATGGTACGTATCCATAAGATTTAGATAAT
TACCCAGCTGATATAATACATTGTTTCAACATTCATCTAACGTTATATGG
ACGTTGTGAACCATAGACAAAACAACGTTTTGAGCCAGCTACCGGCATCG
TCAGCATTTTCCTAAAAAAATGATTAAAAAGTTTGGAATTGAATTCTAAT
GTTCCAATTCCTTAAGGTTTGTGTCCTATGCAATCATATAATAAGAAATA
TTAACACATTTCAATGTATGAGACTTTTTGGTTCTTCGAGTACTTTGGGA
TCACATAAGATCTGCGTATCTGAAGTTCTACAGATTATAAATACAACTTC
TTTTGCTATAATGGAGCATTGTAAATAACTTAAGAACTTCTATTTCAAAC
ATTTCTATGATATCAATATATATTTTTTTCTAGGATTCGGGATCTCCAGC
CCTCAGCGAACAAACCAAAATTGTTATTAACGTTATTGATGTCGATGATA
TGAAACCATTCTTCGTGCTACACCAACATAATAAAGAAATCAGAGAAAAC
CAACCAATTGGTAGCCGGGTTGCCATTGTTAGTGCGCGCGATGGTGATAA
AGGAATCAATGCGGAAATCAATTATGCTATTGTAGCAGGTAAGGACCGAT
CTTAGTTTAAAAATATCTGTAAAAAAACACATGAAGTTTATGAAATCTTT
GATAAAATATCGGAATAGCTTAGATATTTGGGAGTTATGCTTTAGGAGGG
ATATTTTAAGATAAATATTGTTTTAAGGAGATTGACGAATCACCAAAAGT
TATTATAACTCGAGCATAGAATCCTTTCGAGTTACAAAGCTTACAATTGT
AACATAATAGTGAAACAGGTACAACTTTAAACAGCTGCCTATGTTTATTA
ACTTTTGTATCACTTGTTTCACTCAGGTGATGAATACGGCTTATTCAAAA
TTGACCGTAAAACTGGTAACGTGACAGTTAAAGGAGTCTTGGACCGAGAA
TATTACCCAAAATTCACTTTACAAATCGAAGCGTACGAAGCGGACAATGT
TAATTCGTACGCGCGGATTAATTTGAATATCAAATTGAAGGATGAGAATG
ATAATCGACCAAAATTCGAGAACGATCATTATTCCTTTGAGTTGGATGAA
GATAAAAATGAAATCAGCCCTGATCGAATTATTTCAAGAGATATCAAGGC
CTATGATGATGACGTCACAGTGAGTCACTTTTTATGATTGAGGTTTTATA
GTTTCATTCTATGGAAAGTTTGTCCTATTCGTCGAGTTCAAGCCCATAGA
ATTCGGAACTCCAAATTGTATTATAGTGCCTACTTATTTGTTTTATATAT
GGCAAGTCTGACCTATTTCAACTTAAGACTTTTAAGCCTTTTTCTTGTTG
GATATATTAATCATTTTTATAATTTTTATTTTTTTTAGTGGAAGAATAAT
TTCATTACATACTGGATGGATGAGAACGAATATTTTGAAATCCTCTCCGA
AGCTGGAACCTTGATTCAAAAAGGTGATTTGAGACGACAAGACAAAGATC
ATTTCAAATTCTTTGTAAGTAGAATTGTCATACGTTAAAACAACGTCCAT
TTAACGTAGTTCAATGTTCATCTAATATTTTGAGAATAACTTCACTTCTA
AGCACGATTAAAATATTTCATTTTCTCAATATTCTTTTCTTCTTTTTGCA
GGTTTACGCTACCGAACGAGAGACCAGCGAAAGATATACAGATAAAACTG
AAATCGATATTCACTTAAATCGAAGCAAACGCCGCCCGAAGGTGATCAAC
GGTTACGGAGAAATTTCTGGGGCGTCAGGGGGCGGAACCTACTCAAACGC
CCGTAGAGACTATGTGAATAAATACCTGTTCACTGTGGTATTATTTTTGT
GCACGTTATTGGCATTACGCACGCAGCTGTAAAGTAATGGTTTCAGAGGA
TGGCATTTAGTTTGGTTGATGTTAAAAAGAAAACTAGGCATGCGTGTGGA
TGGGAAAAAAATGGCGGGAACTAACGTTCTTAGTTCCTAACACCCTTTTC
TCTTGGACAAAAGAAGGGGTATTCTATAAAAATGAAAATTATTGAAGAAA
TCCAAAACAGATGTAAATAATATGTATATTTTAAAGACTGGAATTTCCTC
AACAATATTCTGCAAACCAACGCAATACCGTTACCACAGCAGCAGGCACT
GTTAATGGCGCGCCGAGCGCGTTTTAATTTATTTTGGACAGTTTTCAGTT
GAAGAAAGAAGCAAACATCACGCGCATTATTGACAAAAATTATTAACCAC
ATCTTGAAGGGGTAATAACAATAATTTATTGAAACATGCAAATACAGCTT
TTACAATCAAAATTACTATTCAAAAGATTGTGAAAAAATGAGCACTTGTA
ATGTTTATGCTACACTATGTTATGCAGAAAAGCACAGATGGCAATCCCGC
ATCGCAAATCTTGCTGAAACACGCAGCACAATTATGGTTTAAATGTGTGT
ACCCTTCGTTTATGAGCTGGTGACATCATTATAAAAACGGACGACATTAT
TGGATAATGTGAATAGAGCTTTAGTGAAAAATAGAACACTTTGTATGAAA
GAGTATCCTTAAGGCACTTGCTACAAGTTGAAACTTTTTACTCCGGACGA
TTCAAATATCGGACACCATTATGGAACAAAACAGTGTTGATGTATTTTTG
TTCCTTTAAAAGTTAATTGTATTGTATTTTATTTATTTTGTGTGACATGT
ATGTAAAATTCCTAAAAGTACAGGAGCATTCAAAATCTTTGAAAAAAATG
TAGCTAGCCCTAAGTGCTACGATTTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00073217TCONS_00073217Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00073217-proteinTCONS_00073217-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_88supercontigscaffold_88:223568..232493 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.01	0.01	0	0	37.12	26.15	27.19	26.9	10.45	11.32	7.69	10.99	23.8	23.27	0.65	0.32	25.49	31.67	47.66	31.92	43.79	42.62	8.55	13.53	16.45	22.93	0.34	0.32	0.03	0.02