XLOC_045407 (gene) - C. hemisphaerica

Overview
NameXLOC_045407
Unique NameXLOC_045407
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_88:170214..175471+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_045407 ID=XLOC_045407|Name=XLOC_045407|organism=Clytia hemisphaerica|type=gene|length=5258bp|location=Sequence derived from alignment at scaffold_88:170214..175471+ (Clytia hemisphaerica)
ttttttatcattaatcatgttcatttgtttttatatttttcagtcaaaca taaagatataaaaaaatgaattttatgagAATTTATTCACGAAGTCAACT GGCAAGAAACATTTGGAAAGGCAGAGTAAATACTCAAAATTTAGCAGCAG TTCAAAGATgtcaagaaatttcaaatgagGTTTCATGAATTTTAATGTTT TGCACTCCCACATATAACATGTGGTCAAAATTTCTCAGTTTTATCTACGA AATCAAAACGTTGTGTGTTGTTTCAAACCTCTCGCACTgatgaataataa taataatagcaATGCAAAATTTAGTgtaaaaaaagttagaaagtCCATGT TTATGATAATCTCTATCCAACTTTAGTATTCCCGCTTTTGTAAAAAACGC ATGCGTCTGTAGAATTTTGGTTTTAAATCGGAATACACTTTAAACAGAGG TAacctagctggcacacaacgttcatctaacgttatatggacgttaagAA CATTAGacaaacgttaaaacaacaaTGTGCCAGCTTGGGAAGGCAGACAG TTGGCTAGCCATCTAAATTCTATCTCGttattttttacacctttttttat aagaacaaactatataagaacgtaaggtttcgatggctaaaatgataaga acacgttaagaatattttaaggcttcgcggactcaaaaaaaccgatttct taagaaaatagacaaaaatactcaaaaagtggcgaaaataagaacatgtt aagaacatttataggcttaaaactcaaaaagttaagaacacccgaagTTT GTTTCTAAAAATGctggacgttcttataaaaaaccgtgtGTTCTCTTTTC AGGCACCCAGTAGCACAACACCACCTACAACAGTAGCGGCTGGCGAGAAA CGAGACGATTCTGTTGGCTTCATGTTCGGTTCAATTGTCGGTAACATCAA AAAGAACATTGCTAGACAAATGGTTTGTTAAGATGTTGATTGAAACCTAA AATTATCGATTCTAACACATTAGTTTGTATATTACTTTTTTAGTCTGATT TGTGTTCCAGACATCTCTTTTTTTGCCTTGGAAGGCTCCTTAAAATTATA GCAAAACTGAATTTCTTtctaaacttttgttttttttgcataatattTTG TGCAATGGATTGCCTGTATTTTAtattgaattagaaaaaaattattttta atctcGTTGCAGGCCAAGAGTTTGGCGTCGAAGCATTTATACGAAGCATG CGCAGATCAAGTAAATTATGAAGAGTTCTTTGTTGGTATGAATCTTAGAA AtcctattgtttttttttcagaagcaaacgttcgatttgcgttAGGGATC GCCTCTCTTTTTtccacatgcacgtaaaattttattttagaccTTACGGA AAATTGTTCGTAattgtcttttgggaatttccccgacattatgtagagtt tttCCTCCctccaaaaactttttgaacgtaaaGCTTTTTTCATATGTACG TTAAACTTTACTTAAGACCTTACGTAGTGTTTTATAAACTGGTAgatcca taaaagtatcgctttttttttacttgattttGGACATTAAAGATCCGGTA CGATTGCCAAACAAGCCTGTGCTACCATTTAAAAAATGTCCCTTGTTATA ATGTACAGTTAAGTGTTACAcattattttaaatattttctttcccCCTTT TTAAGCTTGTGAAATGCCTGACACGTTCCAGTCTTGGTTTTACATAATGC AGCTTCATGTGTGGTAAGCGCCCAACCCGAACAAATATTGAGTTGTTGTT CTAAAACACATTATTTTACTttaaggtcccgaataaacgTACCAGCCAAT TTTTAGAGGCCGTAAAGCCCGCCCTCGTGTTTCTAGTGATATTTCTAGGG TTTTTATTAATAGGTTTTAATTAATAGGTTTTAAATTGAtaccgtttaaa tttttcaaaattacaatatcgcgaaattaaatacctgcgaaaaattgcga aattttcaaaaatgaacgaaaatgaaatttttgaggGATTAGTGATATTT CCTTACTGTAAAAATGGATAGAAATAGACCCAATACGTTGTGTTTAAAGT GAAgtcagtcattttctttctttattcccactttttgaaaatgcccaatT TAGCAAagcgcgaaatttaatacacgcgaaacacgtttccTCGAAAAAtt taataccaataaggtaacCAACCCATCCCCAGTTTATTCagacatttgaa aaaatttcggaCCGCGAAATTTCATTTTAGCTACGAAACATCTTCAGATG ATACACCTAGACTTTTCATAAACAATATTTTCTCCATCAGGATGGTGTTG GTACGTTTACGAGCTGAAGGAACTTCCGGTAAAAACCTCGCATACACCAT GGTCGAAATTATGTGGCAAGATATCGAAGCTAGAATCAAATTACTTGATG TAAGTCGTCTAACTTTGTTtcgaccgtagcatgaaggtagagcatccagc tacggtgcgcaaggtggTGGGCTCGATTCccagctgggtcataccaaaga ttcccaaaacaGTACTCGATGCCTCTCTGCTCGATGCTCTGCAACTACAG AGATGGAACAAAGggagaaaagggagccttcggggtGCCCTCGAGTACGG TCACAAACTTATTTAACTTTGTTCAAGCTCTACAAAAAAGACTTACTAGA GATTGGTTTGAAGGTTAATCTGGAACtcgattcatgatattcattacgTA AAGTTTTGTACGAAAGCAGCCAAAAAAAACCGggtgtttgccactaattt tgaattcaaagaaaaaaactacaaacagTTATTTTGAGTGCTTCCATATA AACATTGCTTCACGAATCGCCGTATTTCCAAATGACTCGTCTATTGTAAT AAGCTAAACAGCTGTGATACAGTGGTAAAAATTATGATGCTCTTTGCTGC TCGTTATCATATTCAAAGATTCAGAGATCGAAAACAATTAGAGAAAGGAA GGATAGTCTCCTTTAGTCTTCCACATTTTTCGAATAGTTGTATGTAAAAA GGCTTGAAGTAAGAACTTCCCAAAGATTTTTTACTTGTGTTGTTGTTTTA GAGGAGATTGAAAAGTGAAAGGATATGGTTCCTTCACTTCTTGGCGGGAA GATGGCTTGTAATTTTACTTAACCGATGGCCTTTGCCACTGAGGAAAGCC CAGTAACCGCCCGCTTCCTTCTTCTCAGATACCCTGATAGCACCCACAGA GCTATTTTAACCGGTTGTAGATCATCTTTAATCCTGGGTGACAATTTCTC GGATTGGCcctaaattagaaaaattacaTTACAGGAGACGATAACTTTGA CACCatagttattttttttctttgttcacaTCACAGGTTGTTGACACGAG CCAGAAGAAAGAAACCATGGAAGAATTTGGCCAACAATTCTTTGGTCTCA TCGTGGCTTACGACgaagtatttcttttgtttgaattgatgttttaattg attaatcTACTCTTCATCTAAGAGAATGCTTTCTAGATAAACAGCTAAAC ACTAACATCAAAATCTTTGGGAATAAACGATCGTTCGAGCACGAACGGGA AGCATAACTTTTTGGAACAACAGGgacattcgaattatggaaagcATTTT AGGAGTGTTTCTTCTTGTTGGGAACCGATAATTAGTTCGAACTattgaaa gatttgaataatagaagcTCGGATTAGCCAGAACCCACTTTAGTATTCTT TTCAAGATGCTTCATAACTATTTTGCCCATTGATCGGTCTGGCTAGGTTG GTTTttcggtcaaaaattgatttaggTTTTCAGcataaagaaattttaaa ttgctTTATTTGTTGATGTCTTCTTTTAATTTCCAGGGCTTATTGGGTCA CGACAGAGTATTAGCATCTGCTTTATGGAGGTAAATTATGATATCTGTTC TGGCTCCTTCATCTTCTCCATAAACCTATTATACTCTTGAAAGAGAAAAT TAAACCGCCAGTTTTCAACTTTTCGTTATCGAAgtaaaaattagcaaaaa gcTTTTATCAAAACCGTGTTCGTCCGGTACAGACTATCGAGTTTAAGTAT CTATGtttttttctgcgacggagacggtaagatTTTggtttgtctagatc ctgaatGACTGAGGAACAGTAAATCAATAAATTTTACCGTTCCTTCTTCC CAGGTCAAAATACTCGTACTTTAGGTATGTGGCCTATGTATGCCCTTTAT AGGTTAGGTTTAGTCTTccttattccaaatcgcttcagtcacccGCCATC CTGAAAAGTGTCAATAAATAATCTTGCTACTAGCTCCTACCAACAAAAAT CACGCTTCATTGCCTATTCAACAGGCTAACTGCTTACACGAAGGTGTATT CAGCGAAAAAAATCCGTAGCCTGTGAACGACGTCTCTAAGTATCATTGTG ATGTcccattttttctctttcttgcaGAAATCTATTCTACAATAAGGCAA ACACGGATGCTGAAAAGTTAGCCTTGATGGTAGAGTATGTTAGGAAACAG GTAAAATTCAAATACTTTCGTTTCACAAGGCTAGAGGAACATTCTAGGCT TCCTTTACTGTAAGAAAGCTGACGCCAGGTGGTGGATTTTCATTCGTTTT CTCTTGTTTCAAAGTGGCTGTACCACAGCACAATctaaatttttgtcatt ttgacgCGTTTGAAAGtttaagaaaacttttggaTAGTTAACCGTAAGTA CGATAGTGTAGGAATTGAAAGCGACTGTTATTATATAGTGTTGTTTTGGT TACTTTAGATTCAGCATCTTGAAATGCAATCTTCTGAAGATCTTGTTATG ACCGGACGAGTTGATTGGCTACCTTTGCACGAAGTAAATGACCAGAAGTA ATGAGCTGATGTGGTGATTATAAGAGTGGTTTGTGCACAATGCATGTTCC TTTTACCGGGTgccatttgttttgaaattcaaaaagtcttgGTATAATCA TTGGTTTTGGAATATTTCTGTCCTTACATACATAATTGAGAATATTCTAA CATAGCCATACTACTTTTAGCCAATGGAATGCTAATTGGAGTTTGAATTC TGATGTATTTAGTCAATGCAAAGTATATGATAAACATGGTTGTGGTTGTC CAGTTCGATAGTTTCTGCTTTATTCGTGGATCTCTACAGGAGCTTGATCT GTTCTGAACGGATAACCTGCTGTTTTCGCGAATacattcattattttttc aaaaaaca
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00073200TCONS_00073200Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00073200-proteinTCONS_00073200-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_88supercontigscaffold_88:170214..175471 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
29.67 25.72 15.12 14.83 10.18 7.92 14.08 14.32 19.07 14.54 14.22 15.37 12.84 11.45 11.02 9.79 29.3 29.22 9.1 10.45 26.38 22.74 36.31 27.53 19.94 20.13 8.95 5.73 14.78 17.68