XLOC_045274 (gene) - C. hemisphaerica

Overview
NameXLOC_045274
Unique NameXLOC_045274
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_86:417869..424476-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_045274 ID=XLOC_045274|Name=XLOC_045274|organism=Clytia hemisphaerica|type=gene|length=6608bp|location=Sequence derived from alignment at scaffold_86:417869..424476- (Clytia hemisphaerica)
ATAGATTTCAAATGAATAAAAACTCATAAAAAATGACATTGTCACAAAAG GAATTATTATCAGTCATTAGTATTCTTGCAGAAGAGTCAGCTTCAACATT TGATGTTATATCAAATGCGCTTCATCATTATTTTGGTCCAAATGATTATT TTCGTCTTGGAACAGCACTGGTAAGTGGAAATATTAATTCAAGAAAACAT GCTGTATACTAAGGCTGGGCTTAAAAAATTGTTGGTTTGCCGTCACCCGA CCCTAGATTTTGAAGGTGGGTGGGTCGGTCGGATTTTTTTTTTATTTTGG CGATTTATGAAATTTTCGTCCATAGAAGGGTTAACAGTTTGTTTACATTT AGGTAATTTTGAATAAAAAACAGAAGTGCTAGCAGGGAATTTACGCCTAA GAAATATTGAGCGATTTTGTATCATATCTAACTATCTTCTTCACGTAGCA ATAAAAATGTTCACTTTTTCCAAATCATACTCTAAGATGGCTAAACTTAT CGCAATCCCGGCTAAACTTTCCTATTGACACTTTACAACAGAAAAAGACT GAGACTCTTGGGAGGTAATAAAGTAACTTCAACCTGTCAGTGCTGGCCAG TAGCCTACAGTATTTCCTAGCATTTTTACGAAGCAGAAAATCTTTTCTGC CAATATGCCTGGGTAAAGTATCAGAAAGATCCCGAAAATGCGCTGCCAGG AATGTTGAGCTGTGAGTAAAATGTTTAGCCATTCTAGGGAAGTTAGTTTT CATTACTAAGGACGATCTTTGCTTCATTATTTATGTTCGGATAATTAGTC TAGACCAATTTTATTTTTTTTACATTTAACAGCTCATGAAATTCTTAAAG GTTTTATTTTTACATTGTTTTCATGTCTCATATCAGGACAGTGTCTGCCT ATTGTTATATTGTACTGATATAAGCAAAAAAATATTTTTCTTTTCCTCGT TTTGACCAACCTTGCTCCATATCAGTGTCAATTCAATATTAAAAAGCTTG CAAATTGAAATTGATGAGTAAGCAAACGATATAGCTCTTATTTGAAAACA AAACCTTTAATAAACACTAAATGTTATATTATTTTCAAAAATGATAATTT TACGTTTAGTGAATTGATACATTATCTCTGTATGTAAATTTTAGCTGATG CTGTTCCAACAACCAGATTTGCTACCAGATCAAAACCAACGTGTAACGAT TCTTTTCTTACTGTACGAGATGTATAGAAGTCAACCATTGGTTAAAAATC CTTTCGCCCCATTGTTTGTTCATCTGCTCAGTGATGTACCAGATAAAACG AGCGCAATGGAAATTTCACAACCTGAAAAAATGTTTCTTTATCAGTTGAT CACGACACCAGCTGTTACTCCTCAGGTACTATGATTTGTTATAAGGGGTC ACATGGGCCCCGGTGAGCCATTTTGAGTGAGGGGAAGAAATCTTTTCACT TTTTACACCCTCAAAACACCTTAAAACGTTATCTAATTGGGGAGAATAAA AGTTTTTTTGGCTTAAAATAGTAACTTTTAAAAAGTATGGCATGGTCTGC AAAAAAGTGGGGGGCCCATGGGTCATCCACATAGTACGTACGCAAAATAT CTCCAGATACCCCTTGTATGCGGGTCAGACTGGGGTTTTTATAAGACACA AATACTTTGAATTTTACAGAACAATAGAAATAACGTCGTTTATACAATAG ACGTACGCTTTTGCTAAACCACTCCCCCTTCACTGCGTACATACTACATG GATGGCCCCTAATCAATGGATGTACCGTACCCTGTACTCTTTGTATTATG TGGTCACCGAACTGCATATGAAGTTTTTGCAGAGCATCATATAGTTTGTT GATACACTTAAAATATCATAAAGCTCTAATTAAAAAACGTTAAATTTATC TGTTGTCCTGTGACGGTCATCGTAGCTGTGGTTTTCGATGTTTATCATTT TGATAGATATTCATTTTCAATTTATTGTTGTTTTTCTTCTTACCATTTTT AACAGCTGTTGAAAAAGACACCACGACAAGTAATGACAATGGACATCTCC AATTTTCGACCAATCGACATAAGTGAACTTCAAGTCGCCATGTTGGAAAA GCAAACCGATTTACCACAAGTCTCAAGGACCGGTATCAACCCTTTGATCG CTGACCCGGATATGGATACTAACGGAATCGTCAATCCTGCAGGTAAATTA TCAGATATATGAGTGAAAACTTCCGTCAATAGAAAAGCTACGTTATAGCA TAATGTCCACCATCATAGAAGGGAGTATTTGGATTTTAATCTTTTCTGCG GACCGTCCTCGCTATGTTATTGTGTTTAAGACTAGTTAAGACAGTCATTT TACCCTGCCAGCCGACTAACATGGTTATTTACATGACTTACTTTTTTTTT CATTTATACGAACACCCATTTTAAAATCTTGGAATTTGCTATCCCAAAAT CCAACGTTTTATAAAAGGGTATCTCTGGTTAGGTGAATAATACAACTAGT ATATTAGTTCATTTTTTCTAAAACCCCTCAGGAGCATACAGATTGCTCTG GATTGTCGTGCTTAATGGGAACGACGAAATTTCTAACTGTTCCGGTCGAT ACAAGCTCCGCGTGCCATCCCTAGTGACAGCTGTTGTTTTATATTCAATT GAGTCTCTATAACTGGAAACCCTATAGGGAACACAAACTTGTTCGAGTTT AGGAAATTCTGAGTGGTGAAGTGAGGTTTATAAAGCATTGTTTACTGAAG GGACCATAAAACTTGTTCGATTTTAAGGAGGCATTTAAGTTATAGAGGTT CGAGTTAAAGAGACTATACTGTACCAGATAAACCTTTTACCATTTCTATT TCTTTCATTCCAGTTGCACAACAAGTGATCGAAGGGTTGATATGTAACCC ACTGCACAGTGAACGAGCATTGGAGAATTCCATACAGCCCAATTTCTTCC GGCTGCCACCTCCTCTTCATAAAGTGGAACAAGACGAGCTCTGCTGGATG AACCCAAAAGGTTTGATATCCTGAAATTCTACTACTTGTTTGCAATGACT GGAACATTTTGAGCTTAACCCTCACCAAACGCTCTCAACTGTTGAATCGA ATTTTGAGGCTTTAAAAAAGGTTTGGTTCTTCAGATTTCCAGCGAGTAGT ACAGATTGCTAAATACACAGGGGAGTCTCCATCTCGAAGCCGTATTGGAA ACGTAATCTTTTTTGAGTTAATGCAAAATCAGGTTATGAGGATTATGTTA GGATTCGTGTGATCCAACCGAACGTGATTGGTTCGAATTGTGAAACTTTT CGAGACTTTTTTAGGGGGCACGAATCAGGCCTTGTAAAGCTTTTCATGGC CAAAAAATTATATGAAAATGTTTTATTTATCATTTCAGATGATAGTTTTA CTTTCGAATGGGATACCATGATGTGCAGTGAGAATTCGGCCGAAGTTGAA GTCAGGCAATTAATGGGAAAGGCTTTCAAAGGAGCTCTCACTCTAACACA ACAACAGGTACATGTCTTCAACTTTTTGCTCTCAAAAAATTGTGTTGATT TCAAGGAAATTGAAAAAAAAATCTTAAAAGTTTGGGATTCTTACATTCCA AAGTCTCTCTAAGATTGCGAAACCAAATCATTCCAAATTTGAGGAACTTG ATAAAAACATCTTAAAGTATGTATTGTATTATCTTGGTAAGTAAGTATTA TCTTTAATAGGGTCTGTTACTCTTGATGAATGTCAAAGACCTGTAACCAG GAACGTATAGGTTCGTCTAACAAATAGTTTTCCCTTTTCTACTATAGCAA CTACTCAAAGAATTGGAAAAAGACAGTAAACTAGTCTATCACGTTGGCTT GACACCGAGCAAACTCCCTGACTTAGTTGAGAACAACCCTCTGGTTGCCA TTGAAGTTCTCTTGAAAATGATGCAATCCTCGCAAATCACTGAGTAAGGG ATTAAGTTTAAATATCGTTTTGTTTTTATCAAATAAATTCATATTTAAAT TAGCCTCCATCTCTTCTATATCAAGGTCGATTCTTAATATTTCTTAATAT TTGCCTTTTCAACATCTCGCTGGTCACAAGCACAATCAAGATCAAAGGAA GCACTAAACTTTTTTCGTTTTTAGTGAATCTTTCTAAGAAAAAAATGGCT TGGTATTCTAGCTCATTTTCTGAAATATTTGCTTTGACCACCCCTGATGT TATACCATATTTTTGCTTATTGGGCCAGGGGCTTTCGTTTGCCATGGTTA AAAAGCCATAATTTGCCATGGTTCTAAAAAGCTTTACTTTTCAAAATAGC GAGAAAAAAATTCTCAAATTTCAGGGCTCGAGCCTTAGTAACATGGTTGC TTATAAGAAGAAAAAAATGTGTAACAGGGTTCGGTAGCTATCCAGCTAAA AGTTCAATCGAAAAAAAAGCTTTAACCAAATTTGTTCTTTCTAGATATTT CTCAGTTCTGGTCAACATGGAGATGTCCTTACATTCTATGGAGGTTGTGA ACCGCTTGACCACAGCTGTGGATTTACCACAAGAATTCATTCACTTCTAC ATCTCCAACTGTATTTCTAAATGTGAAACAATCAAAGATAAATACATGCA ATCGAGGCTGGTACGATTGGTAAGTTTGTTTGGTACGCATACCCTTGTTT CCATTTTAATAACGTATTTACAATTGAAGCGTTAATTACGATAAACTTGA GCAAAGTCAGACCATCGGCTAAGCCGAAAATAAAATTGACGGAAATTTCG TGGTATAAATGGTCTTCAAAATACCAGAGAGGCATGTGGGTGCAGGACTG AAATTTCTGATACCTATTACTGGTCAAAAAACGCAGCAGTCTCTGAGTTC TGAGGATGGATCCAGCTGCAAGTTTCTTTTGCCTCTTATACAAATCATCC TTCCTCCCAAGAACAACACATTAGATCAAATCAATTAGAAAATAGTTTTT TTAGCCTTGTCCACGTTCCTGTGTGTAAAATACCAACCAAACAAGTGGTA ATACCAACCAAACAAGTGGTAATACCAACCAAACAAGTGGTAATACCAAC CAAACAAGTGGTAATACCAACCAAACAAGTGGTAATACCAACCAAACAAG TGGTAATACCAACCAAACAAGTGGTTTTGCCTAAATAAAAAATTTCCGAT TCTCCATATTATCGAGCGCCGGAGGCGGTTTCTTTCATAGTGGTACGCTA ATCTCGTTTTGCCTTGGCTCATTACTTTGTCTACCATTTACTTTCGGTTT TTTTAACTGGATTACCCAGGTGTTTCTATTTTTTTTCACTGAATGTCTTT TATTCGGAATTGAATAATCGAGACATGAAAAATGACTATATTGTAATTTG AGATGACTTGTAGGCGTTAATAATGTGCGCGCGTGATGCGTGATGGAAGG CGGTCGTTTCAGTGTGGTTTACATCCACACTGTGACCTAGTATTTACCCA GCGAGCTTTAATAATTACAACTCACTGATCTACCAGTGGTAAAAATTTCG AAGTAAAAGTACTTGTCAATCTTCAAATTTTCATGAAGATGTTTCCCTCA CTAAACATAGGTAGATGTAGGAGGATTAAGAATTATAATAAAAACATTTT ATGCTCTGATACTTATTGAGGAGTAATTTATTGGAAGAAAAATTCTGGTT TTTGGCTATTTTTACCACCAACTGTTGCTAAATCTTTCGTTTTTTTTCGT TTTTTAGGTTTGCGTATTTCTTCAATCCTTAATCCGCAACAAAAGTATCA ACATCCAGGACATTGCGATTGAAGTGAATGCATTCTGTGTGGAATTCAGT AGTATACGTGAAGCTGCTAGCCTCTTCCGATTATTACGTTCTGTTGAAAA CAATGAGGGTGGAGAAACGAACACTAGCGGTGGCAATAAAAGTGCAAATT CAAGTCCAACGTCTGCTACAGGAAAGTAAAGAAGCATCAACAACTCTTTT CGCAATACAAAGTACAAATTCGAACTCGGAGGATTTAGAAGCTTCGGAAT AACAATACACCAGATGGTATGGTTCTCTTGGTGAAGATTTGTGAAGTCTT TTAAGGTCACTGATAGAAAAGGTTATGACTGAGCCGCTTTACTTGATAGA GAAAGAGTTCATATCATTTTGAACTTTAAACTTTAAACTACTTTAACTGT TGATGGGAACATCGTTCAGATATGTCGCTTCATTATGAATTGCACTTGAA GTGACTAAAGTACTAAAGATTTTGAAAAAATGATGGATTTTAGATTTTAT GAGTTGAGATCATTTCAGTTTGTCCTGCTGGAATCATTTGGTCACACAGA CATTACATTACAGTAAATAAATGAAAATTATTACTTGTATAGAGGACAAG AGAAAAGTTTCACAATTTCCATTTTTCACGGAAACATGTAAGTACCAGTT TTTCTCAAATTAATGAAGACGTGACGAAAATGTCATGATGAAACCAATAT CAAATGTTCTTTTGATAAAAATGACCTTGGGTTTGAAATCGGAGATTATA TCCTTACTCGTCTGTCTATTTCAGTTATTGTATCGTTTCACGACCTTTGT TTATAAGATTTTAAAGTACAGCATTTTTTCTAGTCATTAAATCCGTGGTG GTTTTCAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00072992TCONS_00072992Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00072992-proteinTCONS_00072992-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_86supercontigscaffold_86:417869..424476 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
CNOT11CCR4-NOT transcription complex subunit 11 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
42.76 38.91 66.44 64.52 42.13 31.69 30.25 32.25 23.78 24.04 18.42 14.76 15.18 14.04 17.47 18.75 29.47 25.27 9.11 10.97 14.59 16 33.1 30.62 23.16 25.64 10.55 8.12 18.43 20.67