TCONS_00072992-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00072992-protein
Unique NameTCONS_00072992-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length454

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00072992-protein ID=TCONS_00072992-protein|Name=TCONS_00072992-protein|organism=Clytia hemisphaerica|type=polypeptide|length=454bp
MTLSQKELLSVISILAEESASTFDVISNALHHYFGPNDYFRLGTALLMLF
QQPDLLPDQNQRVTILFLLYEMYRSQPLVKNPFAPLFVHLLSDVPDKTSA
MEISQPEKMFLYQLITTPAVTPQLLKKTPRQVMTMDISNFRPIDISELQV
AMLEKQTDLPQVSRTGINPLIADPDMDTNGIVNPAVAQQVIEGLICNPLH
SERALENSIQPNFFRLPPPLHKVEQDELCWMNPKDDSFTFEWDTMMCSEN
SAEVEVRQLMGKAFKGALTLTQQQQLLKELEKDSKLVYHVGLTPSKLPDL
VENNPLVAIEVLLKMMQSSQITEYFSVLVNMEMSLHSMEVVNRLTTAVDL
PQEFIHFYISNCISKCETIKDKYMQSRLVRLVCVFLQSLIRNKSINIQDI
AIEVNAFCVEFSSIREAASLFRLLRSVENNEGGETNTSGGNKSANSSPTS
ATGK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_045274XLOC_045274Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00072992TCONS_00072992Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019312CNOT11
Vocabulary: Cellular Component
TermDefinition
GO:0030014CCR4-NOT complex
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0030014 CCR4-NOT complex
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019312CCR4-NOT transcription complex subunit 11PFAMPF10155DUF2363coord: 301..424
e-value: 1.3E-50
score: 170.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 431..454

Blast
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BLAST of TCONS_00072992-protein vs. Swiss-Prot (Human)
Match: CNO11 (CCR4-NOT transcription complex subunit 11 OS=Homo sapiens GN=CNOT11 PE=1 SV=1)

HSP 1 Score: 517.309 bits (1331), Expect = 0.000e+0
Identity = 260/447 (58.17%), Postives = 325/447 (72.71%), Query Frame = 0 
Query:    1 MTLSQKELLSVISILAEESA--STFDVISNALHHYFGPNDYFRLGTALLMLFQQPDLLPDQNQRVTILFLLYEMYRSQPLVKNPFAPLFVHLLSDVPDKTSAME------------ISQPEKMFLYQLITTPAVTPQLLKKTPRQVMTMDISNF-RPIDISELQVAMLEKQTDLPQVSRTGINPLIADPDMDT-NGIVNPAVAQQVIEGLICNPLHSERALENSIQPNFFRLPPPLHKVEQDELCWMNPKDDSFTFEWDTMMCSENSAEVEVRQLMGKAFKGALTLTQQQQLLKELEKDSKLVYHVGLTPSKLPDLVENNPLVAIEVLLKMMQSSQITEYFSVLVNMEMSLHSMEVVNRLTTAVDLPQEFIHFYISNCISKCETIKDKYMQSRLVRLVCVFLQSLIRNKSINIQDIAIEVNAFCVEFSSIREAASLFRLLRSVENNE 431
            M+L+ KEL S++SI++EE+   STF+ +S A HHYF   D+FRLG+ L+ML QQPDLLP   QR+T L+LL+EMYR++PL  NPFA  F HLL+  P      E            I+ PEK FL QL+  P    +L KKTPRQ+  MD+ N  + +DIS LQ+A+ E+Q++LP  S+     +++DPD D+ N   + +VA Q+ E L+  P   +  +E+  +P F R PPPLH  E DEL W+NP +     +WD  MC +NS  VE++++M KAFK  L+  QQ QLL ELEKD KLVYH+GLTP+KLPDLVENNPLVAIE+LLK+MQSSQITEYFSVLVNM+MSLHSMEVVNRLTTAVDLP EFIH YISNCIS CE IKDKYMQ+RLVRLVCVFLQSLIRNK IN+QD+ IEV AFC+EFS IREAA LFRLL++++  E
Sbjct:   61 MSLTPKELSSLLSIISEEAGGGSTFEGLSTAFHHYFSKADHFRLGSVLVMLLQQPDLLPSAAQRLTALYLLWEMYRTEPLAANPFAASFAHLLNPAPPARGGQEPDRPPLSGFLPPITPPEKFFLSQLMLAPPR--ELFKKTPRQIALMDVGNMGQSVDISGLQLALAERQSELPTQSKASFPSILSDPDPDSSNSGFDSSVASQITEALVSGP---KPPIESHFRPEFIRPPPPLHICE-DELAWLNPTEPDHAIQWDKSMCVKNSTGVEIKRIMAKAFKSPLSSPQQTQLLGELEKDPKLVYHIGLTPAKLPDLVENNPLVAIEMLLKLMQSSQITEYFSVLVNMDMSLHSMEVVNRLTTAVDLPPEFIHLYISNCISTCEQIKDKYMQNRLVRLVCVFLQSLIRNKIINVQDLFIEVQAFCIEFSRIREAAGLFRLLKTLDTGE 501
The following BLAST results are available for this feature:
BLAST of TCONS_00072992-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CNO110.000e+058.17CCR4-NOT transcription complex subunit 11 OS=Homo ... [more]
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