XLOC_045209 (gene) - C. hemisphaerica

Overview
NameXLOC_045209
Unique NameXLOC_045209
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_86:167356..170881+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_045209 ID=XLOC_045209|Name=XLOC_045209|organism=Clytia hemisphaerica|type=gene|length=3526bp|location=Sequence derived from alignment at scaffold_86:167356..170881+ (Clytia hemisphaerica)
gatgttcttttaaaaaaaagttgtttttacatttctctatcatgtgaaca gttcagttgttcacgtgttaggaaaaaaacatctctgtatataagattaa atatttcacattgttgtagataagagatagccgaatggtctaaggcgtct aTGGCTAATATTAGTGACTCCAGGTTCAAATCtcttgttcagttcatatt tttattcgctgggccttcatgccctctgggcttcttgttttcttttaaga aaaagtaaaaaaaaatgtccATCACAAGTGAAAATCCCACAACAACTTTA ACTGGATTTAACGGTAtaaaatgttttaatcttttttaaCGCCTCACAAT GGAGGGTCAGTGTGACGCACTTTGCAAACAAAAAGATTCGATCATTTTGA GTGTAATTTTAAACACTATAAGAACAAACCGTACGGTTTATTTCATTGCC ATTGGAAGAATCTTTGTACTAAAAATACACCgagaaaataaagaactaaT TTACAATTTCTACACGGTGTTTCATGCCGGCTCAATCCTAAGACGATgaa gattttatattttattttgaataaaatctaCATTGATTGAAACTTGCATT GCCTGAAGGTGGCGCCAGCATGAAACATTGTGGTTCTTTTCATTTGACTG TACTAACAATGATAGGTCTGTTCACACGTACAACACATTCTCCTGTCATT TTTAACTCTCAATCCGATAAAtgaatgacaaaaattttttccctatctta tttttgttttaaactaTTTTAGAAATTTGGTACAAGATCTTTTTGTATTG TTTGGGATCGAATGTTTTCATTCATGTGATTGCTGCATTCATTGCACTTC GAGCACTTCACAAACACAAATACGGACGGTACCTACCTATCGCAATCATC GTGTTTGGATTTCTGTATCCTATCAGTGGAGGTTTCATTACAAGTATGCT AATATTTCCATGTGAATGAGAAACCATCGCAATTCCCAGTTTTTGGGTCT TTAAATCGTCTTTTTTATGGTGaagttttaagaattttcttATACTTTAT CCGAGTTTAGGCGAACTATAAAAAAAGCCTGTGGGGTTAATTCATTCCTA TAATTTGATTGTTACTTTTTAACAATATTTCACCTTATTTTTATGATATG TTCTAAACATATAGCAACAAATGTCAATAAGTCAAATAGCGCTTTGCTGC ATCAAACAaggaaaaaacaatgataccgCGTGTCCAAGAAAAGAGTCCTC TTTGAAGTGAAATTTCTTGAGAACTACAGTATGAACTGTTAAAGAAACaa tctttttgcattggaaagaggagggatgataaacttaaattttgaggggt catttatcaaatttggttAAAAGCTCATCTAAAGTCAAagctaaatgcta aaacattacttctcaaaaaagttgataaaaggCGAAAAACGAGGATATCA AATCATCATATTAGTTCttctattgttttctttgtCTAATTTAACGAACA TTCGTGGGTATCATTAGAGACATAATGCTTTTTCAAGccctaaaaattca aaatcttagGAACATTTTGTGTCTTTGTACAATAAATTTAATACCCTCAT TTTACCCTGAAATGCCATTAGATTTGTGATATTAGGCTGGTTAAAAATTT TTGTCTAAAAGTCTTAATTTCGTATTTTAGGTTGTTGTATTGCTTGGATA TACACTGCAGCCAACTATGCAATGGAGGTTCAAATGTGTGCCATTTATGG TGTGGGGCAGACCTTTTTCTTGGTGGTGGTGTCCTTTATTAGGTTGTATG GAACACTGTAATGAATAGCTTTGAGGTCATACAGCTTATGTAGTGATAAA AGCTATAAAATAGCTTCATCTTTGCCTCAATTTGAACATGACTGTGGAAA CTCGTGGAAatcaagaaatcaagaaattgGTGATTCGCGTAAATTAATAA TCATTTGTATGTGGATCTTCTAATATGGATTTTCTGTTTTACGAAATCCT TTTAGATTTGTTGATCCTTTTCAAGCCTGTATAAACATTGTAACGTGTTG CTTTGAGTTAATACAGCTAACAAAGTAATGAAGCTATCACAGAGCAAATT TCGCCTATCTTGGTCATTTGTTTAACTTTGAAGATGGCCATGGCCAGTTT CAAGGCTGTATAAACATTTTAACGTGTCACTTTGAGTGTATACAACTGAC ACAGTAATGAATAGCTTCATAGCGACAGAGCTGATGTCGTCTACCTTGGT TTTTTGGTTTAATTTAAATATGGCTAAGGAAACACATAGAAATCAAGAAA GTCGCATAGTAATTCGTGTGAAAGAATGATTTTACTAACTAAAGGCTGAG GATTTACCAATCTCACACGTGGATGTCCTGTTGCACGAAATCATGTTGAA GTTCATCTCTATCGATCCTTTTCAAGGCTGTACAGTATAAACCATTGTAG TGTATAGCTTGATGTATAGCTTGATTCAATACACCACAGCTGATCTTGgt tatttcttttaatttaaacATGGCTAAAGAAGCACAAATCATGACATTCG CATCATAACTCGTGTGAAGGAATAAGGACTCTTTCAAtatgaaaatgact gaaaaggTCAAACCCATGCAGTTCTGGTTATTGACAGTCATTTTATCGAT CATGACTATCAAAGATTTATCCCAAACATAGTGTTTCCCGTATCATAATC GGTCCTCAGCAATTTCATTGTGTTTGTTGGCTGATTTAAtacagttgaac tcatgtaattcgaattctaaAGAGACCGAGATTTTTGTTCGAAACATGAG TTTCGAACTAAAtgagttttcatatttttgacctgatttgatgaaaaaag actttcccaggtttacttttgaacaattttgtattttcgagcTAGAATGA TGAAATGCTAGTATAAATAATCTTgacacaaaaatttaaaagtcaattcA TAATtcgattgtttcattttttgctCTTGTTCCTTGGAAATCTCCTCAGA TCTTCTGAATCAGTGGGGTGATGTTCGATGACTCGAAAAGAGTCCTCTTT TTGAGAGTGTCAATAGCCTTGTCAATCAATAAAGtcgaaaattcgaatta cattAAACTTTCTTGATGGGACCTGAAATTCTGTTCGATTTGAATGATTT TTCGATTTACATGGGTTCGAATTAAAGGagtttttttaaggttttcaagg tAAATTCTGAGGGGACCCACGGAATCTGTTCGAATTAGGTGAGTTTTCGA ATTATAGTTCGAACTACATGAGTTAAAGTGAATTGTGAGGCTTGGATTCG TTATGCGGTTATACGGTTTTGATGGGTTCACATATTTATTATACATATCT TGTAAAATTTTGCGGGAGAAATGACTTtgctttatttatttatttatttg ttatttatttATACTGTTTACTTTATATGTTTCACTTTGATAGAGATCAg taaactgagcaaaaaaatataCTGCAACTTTTTTCCAACTTTTGTGGATC AGAAGTTATGGGTGTTTTTGtagtca
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00072831TCONS_00072831Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00072831-proteinTCONS_00072831-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_86supercontigscaffold_86:167356..170881 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
TMEM170APREDICTED: transmembrane protein 170A isoform X1 Homo Sapiens
TMEM170Btransmembrane protein 170B Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
7.6 8.23 4.52 3.78 3.07 2.47 6.28 6.38 4.54 3.77 5.43 3.67 4.46 4.39 4.84 4.84 6.18 6.86 4.95 4.29 6.05 6.01 9.34 8.79 5.68 5.39 3.25 3.27 4.52 5.64