XLOC_045177 (gene) - C. hemisphaerica

Overview
NameXLOC_045177
Unique NameXLOC_045177
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_84:169188..176726+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_045177 ID=XLOC_045177|Name=XLOC_045177|organism=Clytia hemisphaerica|type=gene|length=7539bp|location=Sequence derived from alignment at scaffold_84:169188..176726+ (Clytia hemisphaerica)
TGTGCATCGACCACAGAGTAGAGTGAAGAAGAGTAATAAAATTGAGCTGG AATTCATTTCAGACATTGAAACATGAGATTCGGGTTCGCTTTACTTCTTC TAGTAGCCTTTGCCAGCGCATGGGTAAAGCAAATGGAGAGTAAGTAAATT CTACTTTAAACCTTCGCTCGCTCCGGGCACATCACGCTCTACTCTAAAAG GATATGGCGAATTTAATGATCTGACCTACTTCTTCAGCCAAAGCATTCAA AACCTCGTTGCCATTTGCCTGTAATTCAAAGGGAAACTGACTGCCTGGGT TCTAATGATTATGTTTATAATCAACATTTGTTTCGGTGCGATtattttgc tttagccaatcactgcgctcaaaaaattattcaatattCTTCCCAAATCT GGAAGGAGGTCAAAGCGATTCACCAACCCGGACAGATCTGGACAGATTCT GTTACGGACGGACTCAGTCCATTtttagagtgaatacgtgcCATGCGCGG AGTAATCATAATCTGCTCGGAGGTTACCGATGAATATATTTTACCATCTA TCTCCTCTTTTCAGACGATGGTATGTTTGAAGGAGACATGTTGTTGNAAT CTAGTCGGAGGTTACCGATGAATATATTTTACCATCTATCTCCTCTTTTC AGACGATGGTATGTTTGAAGGAGACATGTTGTTGACACCTGATCAACAGA TGGCTGTTCAAAATGGATTCACTAGCATCAAGAAAAATTTCTGGCCAAGA ACCATTTATTATGACTAGGAACCTACGCTAGGTGAGACGAATCTACCCTG TATTTGAAAAAATGACTTTATACACAAATTTCCTTTTAGTatattcatgt aaaaaagtcacaaaaacgtcgagtaaagctctgattggctgaatatTGCA CACATaagcatatatttttttcaaaatgtcaagaGTATGAAGTAATCTTT GCAtgtctcagccaatcagagcttttcgacgttttttcttgaacttgtta catgaatctgctaataagAAAATCATGTATTGTATATAATGATTGATTGA CTCCTACTTGATCCAAAGATTCAAAAGTGACAAGATATGTGATATTTTAT CGATACGCAAAGCATGGCAATGGCTaggcaattttttaaatttaagggGC TGAAAGAGCTTTTCTGGGACCCGTTTTGagtcaattcaaaaaaatcccTG GGAAAACGACTTAAATGTAGCTTTCCTTGGCAAAATATTGAGGGGGTCAT GATAAAGTAACGGGGCCATCGCATGGTAAAGTAACGGGGCTATGGTATCT AATccaaaacaatgaaattcaaacagaaaatgaaTATCTTGAGAAACTTA TGATGAGAACAGTCAATGACTTTTGAGGTACTCGCTTTTGGATTTTCgta ttaatttcaaattttcagaaaccTCCTTTAGAGTTCCAGTTTTTTTAGGG GAGGCCCCGGATGAAAAATCTCCTGCCTCCTCAGCAGGAGGAGGGAGACT TTCTTCTAGAAAAATCCAATAAGTGATCTTTAATTGATGATTgataatac agttgacgctctctaattcgattttcgagGGGAATTTTGTTTTAATCGAA TAATGGAGTTTATCGAATAtcagaacgtcgaattagagagcgtcaactgt tattttttgttattttttcgcTCCAGCTAACGAGCGGAGTATTTTGGATG CGATAGCCGATTATGAGAAGTACACATGTTTCAAATTCGTGAAAAGAACG AACGAGAAAGATTACATCTATTTCTTCAAAGGGTCAGGGTAAGTGAAATT ATACATGCTTTGAGTGGCTTTTTTACTACCAAAAAACCAACCAATTTAAG AAATTACCATCATAAGGTATGGTCCTCTACTAAATACTATCCTCGGATAA AAACATGCCATTTGGGGAAACAGTCGGGGAAATGTGACTAATAATTGAGC GATTTTGTATTGCTTCtatgaaaagtttttgaacttgtttttaaaagttt aaattaaaggttagaaaatttggaaaatcgaCTTTTAATTTCGAGTTGAT TGAATTTGAACTAGCGAGCACCTTTATCATTTTGTTTCTTAGTGAgtgtg acgtctagtataggctacatAAGAACAACTTGAAACTACCACATACATAT ACAATTTTAAGGTAGAtgataagttttttttctctcgATTTTAGATGTTT TTCTGGAGTTGGATACTTTCCAGGCTCAGGGAAACATTCAGTATCCATCG GACCTGGGTGTTCATCCAAGGGTGTGGTCATTCATGAAATCGGACATCGA ATCGGTAAGTTTTCCGAAAATAAATTCAATGGACGATCGCGGTTTGTATC GAGTATCGAGACGTAAAAAACCTAAACGTAATTTTGGAAAGTAGGTCTAC TGTTGAAGACAGAAAATTGGGTTGATTTTGTTACCggaaatttttgatga aaaactgGATAAACTAATTTTCGGTGGTGAATTTTTCATTCAAGTTTCGA CGCTGTGACGAAAATAGCTGAAAAGATTGAAGGAATTGCGGAATTGGGTA CCCCTGAAACACTCCCACTAAAACATAAAGcgttttattttcatatttat ctCTTTCAAAAGGAATCTACCACGAACAAGGGAGAGTTGACAGAGATAAA TACATCAACATCCATTATGAGAACATTGTTGAAAGTAAGTATGTGATTGG CTGATCAAACCAAATACTTGAAATCTATTGACTGATCAAATGAAATTTAT TGgcttaaacttaaaaaaaaagactcAAACATAAAAGAAACTGTCCGAAA TAGCTTTTCCCCTCAGTTTTAACTTAGGGGCTGTTCATATGGAGGCGGGC TGGCCCGGCTTGGTAAGGTGGGATGGATTTTCGAACGTCACGTGATCTAT TTTTAGCTATTTGATTCGTCAAAATCTGTGATATAACGTTCGAAAATCAA TACCACCTCGCTTCCATATAAACAGCCCCTTAGAGTACAGAGCATTATCA AAGTTTAACGGAAAGGTTTCGAAGCGAATTTTAACTTTAAGGAAACCATT AATTAACAcatctcctaccatttgcttacacagcatttttaagcaaaaga agaaaaaacaattttctccTCTTTTGGCGCCGCTCgagcacaaattttga aaaattcttctgtttattttgctttgtcagcatGGAGGCGCGCCTCCTTT ctttatcataaaaaaagaatatcttttaaataattatttttatcatttcc aGAATACAAATACGCTTTCCGAAAATTCTCATCATCACAAGTGACGTCAC ACGGCACAATTTATGATTTCANCTTTCCGAAAATTCTCATCATCACAAGT GACGTCACACGGTACAATTTATGATTTCAGAAGCGTGATGCATTATGGGT CGAAAGCCTTCTCAAAGAATGGGAAACAAACCATCACGACCAAAGACCCA AAATATCAACACCAGATTGGTAATCGACAAGGGTTCAGTGAACTTGATAA AATACAAATCAATCGAATGTATAAATGCTCAGGTAAAATGATCTTTAAAA TACCTACAATCTACAATCTTCAAAGCAAAACAAAGTCCGGTATCTGTAGG CGCGCTGCTATCACTTCTTTCAACTTCAATCGTTTTGCTTGACACTTCTA CCTGACTGACCTGTAATCAAAGCCCTGGACTTAGCTATATCCGCCAAGTT TGATATTAGTTATTAGAAAATCTCTTCCTAATGATAGCATAATTCTATGC AGAGTCTATTAACGAGTTAATACAATTTTCCGTTTAAAATTTCTTGTCCC TCATCGAATAGTGATACGATAAGGGTGCCAAGCCGTATCATTATTCGATG AGGGTCAAGAAATTTTATACATTGACCCACATCGACCAATGAAATTTCCA GGCTGGTGAGTGATCCACATGGAGAGTTGCTTGAAAGTCTTATAACTGTG ACAAGGGCTACAAAGTGTAAAACAATATAAACATATCTGACTATTTCATT ATATCattgatttttccaaaaacgtccgttcaaagattttggttggcTGT AATATAGTAACTATCTGGTGGTGGTTCTACAAGATCTGCCCCCTATCTAT TTAGAAGCCCCGCCAACAAACACACCAAAACCAGCAACTGTTCCCACTCA AGCACCCAGTGGACCCAAAGTGGTTTTGAAGCATGGTCACTGGAGAAGTC TTTCATTGAACAATGCAGGAGAGCTTATCTTCACCACCCGCTGTAAACAC GCTTTCGAGAAAATCGATGGAGGACATTTTCGTGTACATGGTACATGGAG ATGTATCGAGCCCGGAAGAAATGATGTTTTGATGGCAGGTAGGTCAATTT AGGTCATATTTTGATACTTTGATATGATATTTTGTCAATTACCTATTagg tatttaaaaatacaacCTAACGTAGATATCTTTCAAGTTGAACAGTTTCG AATCGAAATAGAAGCAAACGAGGAACCCCATAAACAAATCATTCTTGGTC GTTTacgcctttttttataagaacatccaaaattttgaagcctttggatg ttgagttttaagcctaaaaatgttcttaacatgttcttattttcaccatt ttttgagcatttgtGCCCATTTTTTCTAAGNaaatgttcttaacatattc ttattttcaccattttttgagcatttctgcccattttttctaaaaaaccg GCTGGTTTAGAGTcgtcaaagccttaaaatgttcttaacttgttcttaac atttcggccatCAAAGccgtttgttcttataaaaacgtgtatcaaaTTAA AACTAGGTACCCCTTAATTGATATAAGATGTAATCAAATGATATGATTAG GGGTCCCATAAACAAATATTGACCGTTTTATCAAATTTAAACTAAGGTAC CCCTccatttttaggaattttaatCTTTAAAAGTTAATTTTCAACTCACA ATCTAATAGGTAACAAGTGTGTATCGAATTACGAAAGGACGGACATCCAA CCAGACGGTTCTTTCTCCATCCTTCACAAACCTTCTGGCAAATGTATCCA TCCCAAAGGTGGAAGCTCGTACCCCCGTGACGGCACTGTAGCGCTGATTT ATAGAGGTTGTAGTGGAAAGCGTCTCAAATTCAAACAAGAAGAAATATAA cacatttttgtttgtttgtagcattttttttcatagaactGNTAGCGCTG ATTTATAGAGGTTGTAGTGGAAAGCGTCTCAAATTCAAACAAGAAGAAAT ATAAcacatttttgtttgtttgtagcatttttttcattgaaCTATTCATC TAGAATATAAACTTTAGTCTTTAAAACGACTGGAAAAGAAAAGATATTCG AATGACAATCGTTGTCGAAAAAACATTCAAATGACAAAACAGTGGCCTGT CCACCGGTGTTTAGCCATccttacaaaaatattttatcaaaacacaTCCT ACGAAAGGAAATTGATTTGAAGATTTTAATAAaaccttcttcttctcctt ctgATATTTTAGCATTACTAGGGCAAACGTTTTTGTCGCCAAATTTACCA GGAAGTTCCTTTTCCGAATCTAGACAGGCTATTTTTGATAACCTCTCCAA AAGAACATGGATTTTAACAAATGTGTATACAGTGTAGACAACTGTCGGAC CCATAATCATCAATATTGGTAACTCATAGCAACTAGTAGTAAACACTaat tatttttctcacaaaaatGGCTGCTCCCTATTATTTGCACACAAGTCGTT ACAAAATAATGAGACAGGATAATTACAAAACCATTGAGCTCGCCGATTTG CTTTATTTCTCGAAAATATTAACACAATGAAAGTCATCAACTATATACTA ACTTGTGAAGTCAAATGAGAAAGTGAAACGTATCAAAAAAATCtccgaaa atttatttgaaaaacaGATGTAGAACAAATGCTTTGGAAAGGGAGTACAG TGCGGAACGAAAATTTcgcaagaaaaaataaaatccacAATATGGAATCG AAGGAGATCTACCAATACAAGGATATTGTACTACGGGAAAAGCCGTTAAC AGCTTTCAAACCGAACTTAAAAATCGTACAAAATATACGGCGAATCGAAA ATGAGTTACGACGTCAACAAACCCAATACGACGATAAAACACAATGGATA CGTAACGTCGTTCAATTACGAACTCATCAACGACAACGTATCCGAAATTT AACAAACAACTACCGGCATCATACAAAAACCGATTTTACACCGATCAGGA AAAAACACGACAACGACGTCTATTGTCGGATCTTAGGACAGGCATATTGC CGAGAATGTAATCTAAAAGTCAAAATTGAAGAACGTAAACAACAGACCAA GAATTTTCTCGAAAACAACATCGAAACAGCAGATAAACCTTTGACGTCAA AAGAAAAAGCCGTCTTGGCGATTCTACCGACGACGACCGTCGATAAACAA CCGGGTTTAGAATATACTCAAAAATACAATGAAGATTTGAACCAATACAG ACTTATTCCTTTGCTGAGTTCTGACGAGCCGTTGAAAAAGACGTTTAAAA AGGCGGCACACACTGTTCAAAATGGTCGTATCATTAACATTGTGAAGAAA ACTGacagtgaaaaaaaatcagaaaaatcaaaatccgAAACAACAACGAA TAACAATAAAGATACCAAAAATTTAGTGAAAGAAACTGCAACTCCGCCAA ATTCACTTCAAACGCCACCACCCACAAGGGCAACATCCACCATAAGCCAA CAAGAAAAACCGCCCATAAGATCAGGAGATTCTTCTTCGTTTAAACCGCG TACAGACTTAGAATGGTTCCATGATATTTCGAAAAGACGTAAGAGCAACG TCGTACAAGATCGCAGACTTCCAGATTATTTCGATGTCATTCAACTAGCT GAGAAACTATCCTCTCTATTTCGCGAACGCCATTTACCGCCTGAGCGGAG CTTCAGTCGAATAAGCAATGTTTCATCAGTTGACCTCGATCCAAATGATT TGGGAAGAATCCCAATGGATAGAGGTACATTAAAATCACGTGCAGTTACA AGACAATCTTCAGCTATTTCCCTTAAACCTGTTTTAGAAACTAGCGAAAG TAGCATGAATCAAACATCAAATATTCCTTTTGACGGAGAGCAAGTTAACT CTGAACTCAAAGCAGAGACAAATGGAGATTCTGGGACACAAGGCGTTGAT TGCAACAGCCGGAACGAGCTGAATTCTAGATCGTCAGAAGTGAGTGAAAA TTATTCGGATAGTCATATTGGAGACAATTTACGAGACGAACTTGAGGATA TTAGATCACTTCTGAATCTTGGTGGAGGAGACAGTGATGTCGAGGATGAG AGAGATGTTGGTCGAAAATTTTCAGACGATGAGTTTTCATCAGATGAGGA TGAAAATTATGGAGGAAGGTTGCTTCCGATCATCCCACCCACTGTCAATA TGACTGCGTTTAGAAACATTTATAAAGAATATAACGATTATTAGACAATT GAAGGAAATATATACTTTGTAAATCTCTTATCTTACCCT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00072770TCONS_00072770Clytia hemisphaericatranscript
TCONS_00072771TCONS_00072771Clytia hemisphaericatranscript
TCONS_00072772TCONS_00072772Clytia hemisphaericatranscript
TCONS_00072773TCONS_00072773Clytia hemisphaericatranscript
TCONS_00072774TCONS_00072774Clytia hemisphaericatranscript
TCONS_00072775TCONS_00072775Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00072772-proteinTCONS_00072772-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_84supercontigscaffold_84:169188..176726 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.23 0.03 0.37 0.36 20.99 14.75 18.64 18.57 4.61 10.76 7.48 2.45 6.72 7.73 16.61 48.41 4.27 5.1 23.48 15.91 20.39 22.21 2.51 2.92 2.46 2.33 4.54 4.96 0.08 0.07