TCONS_00072772 (transcript) - C. hemisphaerica

Overview
NameTCONS_00072772
Unique NameTCONS_00072772
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3656

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00072772 ID=TCONS_00072772|Name=TCONS_00072772|organism=Clytia hemisphaerica|type=transcript|length=3656bp
TGTGCATCGACCACAGAGTAGAGTGAAGAAGAGTAATAAAATTGAGCTGG
AATTCATTTCAGACATTGAAACATGAGATTCGGGTTCGCTTTACTTCTTC
TAGTAGCCTTTGCCAGCGCATGGGTAAAGCAAATGGAGAACGATGGTATG
TTTGAAGGAGACATGTTGTTGACACCTGATCAACAGATGGCTGTTCAAAA
TGGATTCACTAGCATCAAGAAAAATTTCTGGCCAAGAACCATTTATTATG
ACTAGGAACCTACGCTAGCTAACGAGCGGAGTATTTTGGATGCGATAGCC
GATTATGAGAAGTACACATGTTTCAAATTCGTGAAAAGAACGAACGAGAA
AGATTACATCTATTTCTTCAAAGGGTCAGGATGTTTTTCTGGAGTTGGAT
ACTTTCCAGGCTCAGGGAAACATTCAGTATCCATCGGACCTGGGTGTTCA
TCCAAGGGTGTGGTCATTCATGAAATCGGACATCGAATCGGAATCTACCA
CGAACAAGGGAGAGTTGACAGAGATAAATACATCAACATCCATTATGAGA
ACATTGTTGAAAAATACAAATACGCTTTCCGAAAATTCTCATCATCACAA
GTGACGTCACACGGCACAATTTATGATTTCANCTTTCCGAAAATTCTCAT
CATCACAAGTGACGTCACACGGTACAATTTATGATTTCAGAAGCGTGATG
CATTATGGGTCGAAAGCCTTCTCAAAGAATGGGAAACAAACCATCACGAC
CAAAGACCCAAAATATCAACACCAGATTGGTAATCGACAAGGGTTCAGTG
AACTTGATAAAATACAAATCAATCGAATGTATAAATGCTCAGAAGCCCCG
CCAACAAACACACCAAAACCAGCAACTGTTCCCACTCAAGCACCCAGTGG
ACCCAAAGTGGTTTTGAAGCATGGTCACTGGAGAAGTCTTTCATTGAACA
ATGCAGGAGAGCTTATCTTCACCACCCGCTGTAAACACGCTTTCGAGAAA
ATCGATGGAGGACATTTTCGTGTACATGGTACATGGAGATGTATCGAGCC
CGGAAGAAATGATGTTTTGATGGCAGGTAACAAGTGTGTATCGAATTACG
AAAGGACGGACATCCAACCAGACGGTTCTTTCTCCATCCTTCACAAACCT
TCTGGCAAATGTATCCATCCCAAAGGTGGAAGCTCGTACCCCCGTGACGG
CACTGTAGCGCTGATTTATAGAGGTTGTAGTGGAAAGCGTCTCAAATTCA
AACAAGAAGAAATATAAcacatttttgtttgtttgtagcattttttttca
tagaactGNTAGCGCTGATTTATAGAGGTTGTAGTGGAAAGCGTCTCAAA
TTCAAACAAGAAGAAATATAAcacatttttgtttgtttgtagcatttttt
tcattgaaCTATTCATCTAGAATATAAACTTTAGTCTTTAAAACGACTGG
AAAAGAAAAGATATTCGAATGACAATCGTTGTCGAAAAAACATTCAAATG
ACAAAACAGTGGCCTGTCCACCGGTGTTTAGCCATccttacaaaaatatt
ttatcaaaacacaTCCTACGAAAGGAAATTGATTTGAAGATTTTAATAAa
accttcttcttctccttctgATATTTTAGCATTACTAGGGCAAACGTTTT
TGTCGCCAAATTTACCAGGAAGTTCCTTTTCCGAATCTAGACAGGCTATT
TTTGATAACCTCTCCAAAAGAACATGGATTTTAACAAATGTGTATACAGT
GTAGACAACTGTCGGACCCATAATCATCAATATTGGTAACTCATAGCAAC
TAGTAGTAAACACTaattatttttctcacaaaaatGGCTGCTCCCTATTA
TTTGCACACAAGTCGTTACAAAATAATGAGACAGGATAATTACAAAACCA
TTGAGCTCGCCGATTTGCTTTATTTCTCGAAAATATTAACACAATGAAAG
TCATCAACTATATACTAACTTGTGAAGTCAAATGAGAAAGTGAAACGTAT
CAAAAAAATCtccgaaaatttatttgaaaaacaGATGTAGAACAAATGCT
TTGGAAAGGGAGTACAGTGCGGAACGAAAATTTcgcaagaaaaaataaaa
tccacAATATGGAATCGAAGGAGATCTACCAATACAAGGATATTGTACTA
CGGGAAAAGCCGTTAACAGCTTTCAAACCGAACTTAAAAATCGTACAAAA
TATACGGCGAATCGAAAATGAGTTACGACGTCAACAAACCCAATACGACG
ATAAAACACAATGGATACGTAACGTCGTTCAATTACGAACTCATCAACGA
CAACGTATCCGAAATTTAACAAACAACTACCGGCATCATACAAAAACCGA
TTTTACACCGATCAGGAAAAAACACGACAACGACGTCTATTGTCGGATCT
TAGGACAGGCATATTGCCGAGAATGTAATCTAAAAGTCAAAATTGAAGAA
CGTAAACAACAGACCAAGAATTTTCTCGAAAACAACATCGAAACAGCAGA
TAAACCTTTGACGTCAAAAGAAAAAGCCGTCTTGGCGATTCTACCGACGA
CGACCGTCGATAAACAACCGGGTTTAGAATATACTCAAAAATACAATGAA
GATTTGAACCAATACAGACTTATTCCTTTGCTGAGTTCTGACGAGCCGTT
GAAAAAGACGTTTAAAAAGGCGGCACACACTGTTCAAAATGGTCGTATCA
TTAACATTGTGAAGAAAACTGacagtgaaaaaaaatcagaaaaatcaaaa
tccgAAACAACAACGAATAACAATAAAGATACCAAAAATTTAGTGAAAGA
AACTGCAACTCCGCCAAATTCACTTCAAACGCCACCACCCACAAGGGCAA
CATCCACCATAAGCCAACAAGAAAAACCGCCCATAAGATCAGGAGATTCT
TCTTCGTTTAAACCGCGTACAGACTTAGAATGGTTCCATGATATTTCGAA
AAGACGTAAGAGCAACGTCGTACAAGATCGCAGACTTCCAGATTATTTCG
ATGTCATTCAACTAGCTGAGAAACTATCCTCTCTATTTCGCGAACGCCAT
TTACCGCCTGAGCGGAGCTTCAGTCGAATAAGCAATGTTTCATCAGTTGA
CCTCGATCCAAATGATTTGGGAAGAATCCCAATGGATAGAGGTACATTAA
AATCACGTGCAGTTACAAGACAATCTTCAGCTATTTCCCTTAAACCTGTT
TTAGAAACTAGCGAAAGTAGCATGAATCAAACATCAAATATTCCTTTTGA
CGGAGAGCAAGTTAACTCTGAACTCAAAGCAGAGACAAATGGAGATTCTG
GGACACAAGGCGTTGATTGCAACAGCCGGAACGAGCTGAATTCTAGATCG
TCAGAAGTGAGTGAAAATTATTCGGATAGTCATATTGGAGACAATTTACG
AGACGAACTTGAGGATATTAGATCACTTCTGAATCTTGGTGGAGGAGACA
GTGATGTCGAGGATGAGAGAGATGTTGGTCGAAAATTTTCAGACGATGAG
TTTTCATCAGATGAGGATGAAAATTATGGAGGAAGGTTGCTTCCGATCAT
CCCACCCACTGTCAATATGACTGCGTTTAGAAACATTTATAAAGAATATA
ACGATTATTAGACAATTGAAGGAAATATATACTTTGTAAATCTCTTATCT
TACCCT
Run BLAST on NCBI

protein sequence of TCONS_00072772-protein

>TCONS_00072772-protein ID=TCONS_00072772-protein|Name=TCONS_00072772-protein|organism=Clytia hemisphaerica|type=polypeptide|length=521bp
MLWKGSTVRNENFARKNKIHNMESKEIYQYKDIVLREKPLTAFKPNLKIV
QNIRRIENELRRQQTQYDDKTQWIRNVVQLRTHQRQRIRNLTNNYRHHTK
TDFTPIRKKHDNDVYCRILGQAYCRECNLKVKIEERKQQTKNFLENNIET
ADKPLTSKEKAVLAILPTTTVDKQPGLEYTQKYNEDLNQYRLIPLLSSDE
PLKKTFKKAAHTVQNGRIINIVKKTDSEKKSEKSKSETTTNNNKDTKNLV
KETATPPNSLQTPPPTRATSTISQQEKPPIRSGDSSSFKPRTDLEWFHDI
SKRRKSNVVQDRRLPDYFDVIQLAEKLSSLFRERHLPPERSFSRISNVSS
VDLDPNDLGRIPMDRGTLKSRAVTRQSSAISLKPVLETSESSMNQTSNIP
FDGEQVNSELKAETNGDSGTQGVDCNSRNELNSRSSEVSENYSDSHIGDN
LRDELEDIRSLLNLGGGDSDVEDERDVGRKFSDDEFSSDEDENYGGRLLP
IIPPTVNMTAFRNIYKEYNDY
Run BLAST on NCBI

transcript from alignment at scaffold_84:169188..176726+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00072772 ID=TCONS_00072772|Name=TCONS_00072772|organism=Clytia hemisphaerica|type=transcript|length=7539bp|location=Sequence derived from alignment at scaffold_84:169188..176726+ (Clytia hemisphaerica)
TGTGCATCGACCACAGAGTAGAGTGAAGAAGAGTAATAAAATTGAGCTGG AATTCATTTCAGACATTGAAACATGAGATTCGGGTTCGCTTTACTTCTTC TAGTAGCCTTTGCCAGCGCATGGGTAAAGCAAATGGAGAGTAAGTAAATT CTACTTTAAACCTTCGCTCGCTCCGGGCACATCACGCTCTACTCTAAAAG GATATGGCGAATTTAATGATCTGACCTACTTCTTCAGCCAAAGCATTCAA AACCTCGTTGCCATTTGCCTGTAATTCAAAGGGAAACTGACTGCCTGGGT TCTAATGATTATGTTTATAATCAACATTTGTTTCGGTGCGATtattttgc tttagccaatcactgcgctcaaaaaattattcaatattCTTCCCAAATCT GGAAGGAGGTCAAAGCGATTCACCAACCCGGACAGATCTGGACAGATTCT GTTACGGACGGACTCAGTCCATTtttagagtgaatacgtgcCATGCGCGG AGTAATCATAATCTGCTCGGAGGTTACCGATGAATATATTTTACCATCTA TCTCCTCTTTTCAGACGATGGTATGTTTGAAGGAGACATGTTGTTGNAAT CTAGTCGGAGGTTACCGATGAATATATTTTACCATCTATCTCCTCTTTTC AGACGATGGTATGTTTGAAGGAGACATGTTGTTGACACCTGATCAACAGA TGGCTGTTCAAAATGGATTCACTAGCATCAAGAAAAATTTCTGGCCAAGA ACCATTTATTATGACTAGGAACCTACGCTAGGTGAGACGAATCTACCCTG TATTTGAAAAAATGACTTTATACACAAATTTCCTTTTAGTatattcatgt aaaaaagtcacaaaaacgtcgagtaaagctctgattggctgaatatTGCA CACATaagcatatatttttttcaaaatgtcaagaGTATGAAGTAATCTTT GCAtgtctcagccaatcagagcttttcgacgttttttcttgaacttgtta catgaatctgctaataagAAAATCATGTATTGTATATAATGATTGATTGA CTCCTACTTGATCCAAAGATTCAAAAGTGACAAGATATGTGATATTTTAT CGATACGCAAAGCATGGCAATGGCTaggcaattttttaaatttaagggGC TGAAAGAGCTTTTCTGGGACCCGTTTTGagtcaattcaaaaaaatcccTG GGAAAACGACTTAAATGTAGCTTTCCTTGGCAAAATATTGAGGGGGTCAT GATAAAGTAACGGGGCCATCGCATGGTAAAGTAACGGGGCTATGGTATCT AATccaaaacaatgaaattcaaacagaaaatgaaTATCTTGAGAAACTTA TGATGAGAACAGTCAATGACTTTTGAGGTACTCGCTTTTGGATTTTCgta ttaatttcaaattttcagaaaccTCCTTTAGAGTTCCAGTTTTTTTAGGG GAGGCCCCGGATGAAAAATCTCCTGCCTCCTCAGCAGGAGGAGGGAGACT TTCTTCTAGAAAAATCCAATAAGTGATCTTTAATTGATGATTgataatac agttgacgctctctaattcgattttcgagGGGAATTTTGTTTTAATCGAA TAATGGAGTTTATCGAATAtcagaacgtcgaattagagagcgtcaactgt tattttttgttattttttcgcTCCAGCTAACGAGCGGAGTATTTTGGATG CGATAGCCGATTATGAGAAGTACACATGTTTCAAATTCGTGAAAAGAACG AACGAGAAAGATTACATCTATTTCTTCAAAGGGTCAGGGTAAGTGAAATT ATACATGCTTTGAGTGGCTTTTTTACTACCAAAAAACCAACCAATTTAAG AAATTACCATCATAAGGTATGGTCCTCTACTAAATACTATCCTCGGATAA AAACATGCCATTTGGGGAAACAGTCGGGGAAATGTGACTAATAATTGAGC GATTTTGTATTGCTTCtatgaaaagtttttgaacttgtttttaaaagttt aaattaaaggttagaaaatttggaaaatcgaCTTTTAATTTCGAGTTGAT TGAATTTGAACTAGCGAGCACCTTTATCATTTTGTTTCTTAGTGAgtgtg acgtctagtataggctacatAAGAACAACTTGAAACTACCACATACATAT ACAATTTTAAGGTAGAtgataagttttttttctctcgATTTTAGATGTTT TTCTGGAGTTGGATACTTTCCAGGCTCAGGGAAACATTCAGTATCCATCG GACCTGGGTGTTCATCCAAGGGTGTGGTCATTCATGAAATCGGACATCGA ATCGGTAAGTTTTCCGAAAATAAATTCAATGGACGATCGCGGTTTGTATC GAGTATCGAGACGTAAAAAACCTAAACGTAATTTTGGAAAGTAGGTCTAC TGTTGAAGACAGAAAATTGGGTTGATTTTGTTACCggaaatttttgatga aaaactgGATAAACTAATTTTCGGTGGTGAATTTTTCATTCAAGTTTCGA CGCTGTGACGAAAATAGCTGAAAAGATTGAAGGAATTGCGGAATTGGGTA CCCCTGAAACACTCCCACTAAAACATAAAGcgttttattttcatatttat ctCTTTCAAAAGGAATCTACCACGAACAAGGGAGAGTTGACAGAGATAAA TACATCAACATCCATTATGAGAACATTGTTGAAAGTAAGTATGTGATTGG CTGATCAAACCAAATACTTGAAATCTATTGACTGATCAAATGAAATTTAT TGgcttaaacttaaaaaaaaagactcAAACATAAAAGAAACTGTCCGAAA TAGCTTTTCCCCTCAGTTTTAACTTAGGGGCTGTTCATATGGAGGCGGGC TGGCCCGGCTTGGTAAGGTGGGATGGATTTTCGAACGTCACGTGATCTAT TTTTAGCTATTTGATTCGTCAAAATCTGTGATATAACGTTCGAAAATCAA TACCACCTCGCTTCCATATAAACAGCCCCTTAGAGTACAGAGCATTATCA AAGTTTAACGGAAAGGTTTCGAAGCGAATTTTAACTTTAAGGAAACCATT AATTAACAcatctcctaccatttgcttacacagcatttttaagcaaaaga agaaaaaacaattttctccTCTTTTGGCGCCGCTCgagcacaaattttga aaaattcttctgtttattttgctttgtcagcatGGAGGCGCGCCTCCTTT ctttatcataaaaaaagaatatcttttaaataattatttttatcatttcc aGAATACAAATACGCTTTCCGAAAATTCTCATCATCACAAGTGACGTCAC ACGGCACAATTTATGATTTCANCTTTCCGAAAATTCTCATCATCACAAGT GACGTCACACGGTACAATTTATGATTTCAGAAGCGTGATGCATTATGGGT CGAAAGCCTTCTCAAAGAATGGGAAACAAACCATCACGACCAAAGACCCA AAATATCAACACCAGATTGGTAATCGACAAGGGTTCAGTGAACTTGATAA AATACAAATCAATCGAATGTATAAATGCTCAGGTAAAATGATCTTTAAAA TACCTACAATCTACAATCTTCAAAGCAAAACAAAGTCCGGTATCTGTAGG CGCGCTGCTATCACTTCTTTCAACTTCAATCGTTTTGCTTGACACTTCTA CCTGACTGACCTGTAATCAAAGCCCTGGACTTAGCTATATCCGCCAAGTT TGATATTAGTTATTAGAAAATCTCTTCCTAATGATAGCATAATTCTATGC AGAGTCTATTAACGAGTTAATACAATTTTCCGTTTAAAATTTCTTGTCCC TCATCGAATAGTGATACGATAAGGGTGCCAAGCCGTATCATTATTCGATG AGGGTCAAGAAATTTTATACATTGACCCACATCGACCAATGAAATTTCCA GGCTGGTGAGTGATCCACATGGAGAGTTGCTTGAAAGTCTTATAACTGTG ACAAGGGCTACAAAGTGTAAAACAATATAAACATATCTGACTATTTCATT ATATCattgatttttccaaaaacgtccgttcaaagattttggttggcTGT AATATAGTAACTATCTGGTGGTGGTTCTACAAGATCTGCCCCCTATCTAT TTAGAAGCCCCGCCAACAAACACACCAAAACCAGCAACTGTTCCCACTCA AGCACCCAGTGGACCCAAAGTGGTTTTGAAGCATGGTCACTGGAGAAGTC TTTCATTGAACAATGCAGGAGAGCTTATCTTCACCACCCGCTGTAAACAC GCTTTCGAGAAAATCGATGGAGGACATTTTCGTGTACATGGTACATGGAG ATGTATCGAGCCCGGAAGAAATGATGTTTTGATGGCAGGTAGGTCAATTT AGGTCATATTTTGATACTTTGATATGATATTTTGTCAATTACCTATTagg tatttaaaaatacaacCTAACGTAGATATCTTTCAAGTTGAACAGTTTCG AATCGAAATAGAAGCAAACGAGGAACCCCATAAACAAATCATTCTTGGTC GTTTacgcctttttttataagaacatccaaaattttgaagcctttggatg ttgagttttaagcctaaaaatgttcttaacatgttcttattttcaccatt ttttgagcatttgtGCCCATTTTTTCTAAGNaaatgttcttaacatattc ttattttcaccattttttgagcatttctgcccattttttctaaaaaaccg GCTGGTTTAGAGTcgtcaaagccttaaaatgttcttaacttgttcttaac atttcggccatCAAAGccgtttgttcttataaaaacgtgtatcaaaTTAA AACTAGGTACCCCTTAATTGATATAAGATGTAATCAAATGATATGATTAG GGGTCCCATAAACAAATATTGACCGTTTTATCAAATTTAAACTAAGGTAC CCCTccatttttaggaattttaatCTTTAAAAGTTAATTTTCAACTCACA ATCTAATAGGTAACAAGTGTGTATCGAATTACGAAAGGACGGACATCCAA CCAGACGGTTCTTTCTCCATCCTTCACAAACCTTCTGGCAAATGTATCCA TCCCAAAGGTGGAAGCTCGTACCCCCGTGACGGCACTGTAGCGCTGATTT ATAGAGGTTGTAGTGGAAAGCGTCTCAAATTCAAACAAGAAGAAATATAA cacatttttgtttgtttgtagcattttttttcatagaactGNTAGCGCTG ATTTATAGAGGTTGTAGTGGAAAGCGTCTCAAATTCAAACAAGAAGAAAT ATAAcacatttttgtttgtttgtagcatttttttcattgaaCTATTCATC TAGAATATAAACTTTAGTCTTTAAAACGACTGGAAAAGAAAAGATATTCG AATGACAATCGTTGTCGAAAAAACATTCAAATGACAAAACAGTGGCCTGT CCACCGGTGTTTAGCCATccttacaaaaatattttatcaaaacacaTCCT ACGAAAGGAAATTGATTTGAAGATTTTAATAAaaccttcttcttctcctt ctgATATTTTAGCATTACTAGGGCAAACGTTTTTGTCGCCAAATTTACCA GGAAGTTCCTTTTCCGAATCTAGACAGGCTATTTTTGATAACCTCTCCAA AAGAACATGGATTTTAACAAATGTGTATACAGTGTAGACAACTGTCGGAC CCATAATCATCAATATTGGTAACTCATAGCAACTAGTAGTAAACACTaat tatttttctcacaaaaatGGCTGCTCCCTATTATTTGCACACAAGTCGTT ACAAAATAATGAGACAGGATAATTACAAAACCATTGAGCTCGCCGATTTG CTTTATTTCTCGAAAATATTAACACAATGAAAGTCATCAACTATATACTA ACTTGTGAAGTCAAATGAGAAAGTGAAACGTATCAAAAAAATCtccgaaa atttatttgaaaaacaGATGTAGAACAAATGCTTTGGAAAGGGAGTACAG TGCGGAACGAAAATTTcgcaagaaaaaataaaatccacAATATGGAATCG AAGGAGATCTACCAATACAAGGATATTGTACTACGGGAAAAGCCGTTAAC AGCTTTCAAACCGAACTTAAAAATCGTACAAAATATACGGCGAATCGAAA ATGAGTTACGACGTCAACAAACCCAATACGACGATAAAACACAATGGATA CGTAACGTCGTTCAATTACGAACTCATCAACGACAACGTATCCGAAATTT AACAAACAACTACCGGCATCATACAAAAACCGATTTTACACCGATCAGGA AAAAACACGACAACGACGTCTATTGTCGGATCTTAGGACAGGCATATTGC CGAGAATGTAATCTAAAAGTCAAAATTGAAGAACGTAAACAACAGACCAA GAATTTTCTCGAAAACAACATCGAAACAGCAGATAAACCTTTGACGTCAA AAGAAAAAGCCGTCTTGGCGATTCTACCGACGACGACCGTCGATAAACAA CCGGGTTTAGAATATACTCAAAAATACAATGAAGATTTGAACCAATACAG ACTTATTCCTTTGCTGAGTTCTGACGAGCCGTTGAAAAAGACGTTTAAAA AGGCGGCACACACTGTTCAAAATGGTCGTATCATTAACATTGTGAAGAAA ACTGacagtgaaaaaaaatcagaaaaatcaaaatccgAAACAACAACGAA TAACAATAAAGATACCAAAAATTTAGTGAAAGAAACTGCAACTCCGCCAA ATTCACTTCAAACGCCACCACCCACAAGGGCAACATCCACCATAAGCCAA CAAGAAAAACCGCCCATAAGATCAGGAGATTCTTCTTCGTTTAAACCGCG TACAGACTTAGAATGGTTCCATGATATTTCGAAAAGACGTAAGAGCAACG TCGTACAAGATCGCAGACTTCCAGATTATTTCGATGTCATTCAACTAGCT GAGAAACTATCCTCTCTATTTCGCGAACGCCATTTACCGCCTGAGCGGAG CTTCAGTCGAATAAGCAATGTTTCATCAGTTGACCTCGATCCAAATGATT TGGGAAGAATCCCAATGGATAGAGGTACATTAAAATCACGTGCAGTTACA AGACAATCTTCAGCTATTTCCCTTAAACCTGTTTTAGAAACTAGCGAAAG TAGCATGAATCAAACATCAAATATTCCTTTTGACGGAGAGCAAGTTAACT CTGAACTCAAAGCAGAGACAAATGGAGATTCTGGGACACAAGGCGTTGAT TGCAACAGCCGGAACGAGCTGAATTCTAGATCGTCAGAAGTGAGTGAAAA TTATTCGGATAGTCATATTGGAGACAATTTACGAGACGAACTTGAGGATA TTAGATCACTTCTGAATCTTGGTGGAGGAGACAGTGATGTCGAGGATGAG AGAGATGTTGGTCGAAAATTTTCAGACGATGAGTTTTCATCAGATGAGGA TGAAAATTATGGAGGAAGGTTGCTTCCGATCATCCCACCCACTGTCAATA TGACTGCGTTTAGAAACATTTATAAAGAATATAACGATTATTAGACAATT GAAGGAAATATATACTTTGTAAATCTCTTATCTTACCCT

Coding sequence (CDS) from alignment at scaffold_84:169188..176726+

>TCONS_00072772 ID=TCONS_00072772|Name=TCONS_00072772|organism=Clytia hemisphaerica|type=CDS|length=1566bp|location=Sequence derived from alignment at scaffold_84:169188..176726+ (Clytia hemisphaerica)
ATGCTTTGGAAAGGGAGTACAGTGCGGAACGAAAATTTcgcaagaaaaaa
taaaatccacAATATGGAATCGAAGGAGATCTACCAATACAAGGATATTG
TACTACGGGAAAAGCCGTTAACAGCTTTCAAACCGAACTTAAAAATCGTA
CAAAATATACGGCGAATCGAAAATGAGTTACGACGTCAACAAACCCAATA
CGACGATAAAACACAATGGATACGTAACGTCGTTCAATTACGAACTCATC
AACGACAACGTATCCGAAATTTAACAAACAACTACCGGCATCATACAAAA
ACCGATTTTACACCGATCAGGAAAAAACACGACAACGACGTCTATTGTCG
GATCTTAGGACAGGCATATTGCCGAGAATGTAATCTAAAAGTCAAAATTG
AAGAACGTAAACAACAGACCAAGAATTTTCTCGAAAACAACATCGAAACA
GCAGATAAACCTTTGACGTCAAAAGAAAAAGCCGTCTTGGCGATTCTACC
GACGACGACCGTCGATAAACAACCGGGTTTAGAATATACTCAAAAATACA
ATGAAGATTTGAACCAATACAGACTTATTCCTTTGCTGAGTTCTGACGAG
CCGTTGAAAAAGACGTTTAAAAAGGCGGCACACACTGTTCAAAATGGTCG
TATCATTAACATTGTGAAGAAAACTGacagtgaaaaaaaatcagaaaaat
caaaatccgAAACAACAACGAATAACAATAAAGATACCAAAAATTTAGTG
AAAGAAACTGCAACTCCGCCAAATTCACTTCAAACGCCACCACCCACAAG
GGCAACATCCACCATAAGCCAACAAGAAAAACCGCCCATAAGATCAGGAG
ATTCTTCTTCGTTTAAACCGCGTACAGACTTAGAATGGTTCCATGATATT
TCGAAAAGACGTAAGAGCAACGTCGTACAAGATCGCAGACTTCCAGATTA
TTTCGATGTCATTCAACTAGCTGAGAAACTATCCTCTCTATTTCGCGAAC
GCCATTTACCGCCTGAGCGGAGCTTCAGTCGAATAAGCAATGTTTCATCA
GTTGACCTCGATCCAAATGATTTGGGAAGAATCCCAATGGATAGAGGTAC
ATTAAAATCACGTGCAGTTACAAGACAATCTTCAGCTATTTCCCTTAAAC
CTGTTTTAGAAACTAGCGAAAGTAGCATGAATCAAACATCAAATATTCCT
TTTGACGGAGAGCAAGTTAACTCTGAACTCAAAGCAGAGACAAATGGAGA
TTCTGGGACACAAGGCGTTGATTGCAACAGCCGGAACGAGCTGAATTCTA
GATCGTCAGAAGTGAGTGAAAATTATTCGGATAGTCATATTGGAGACAAT
TTACGAGACGAACTTGAGGATATTAGATCACTTCTGAATCTTGGTGGAGG
AGACAGTGATGTCGAGGATGAGAGAGATGTTGGTCGAAAATTTTCAGACG
ATGAGTTTTCATCAGATGAGGATGAAAATTATGGAGGAAGGTTGCTTCCG
ATCATCCCACCCACTGTCAATATGACTGCGTTTAGAAACATTTATAAAGA
ATATAACGATTATTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045177XLOC_045177Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072772-exon-scaffold_84-1491911889:169188..169326TCONS_00072772-exon-scaffold_84-1491911889:169188..169326Clytia hemisphaericaexon
TCONS_00072772-exon-scaffold_84-1510915933:169188..169326TCONS_00072772-exon-scaffold_84-1510915933:169188..169326Clytia hemisphaericaexon
TCONS_00072772-exon-scaffold_84-1575043694:169188..169326TCONS_00072772-exon-scaffold_84-1575043694:169188..169326Clytia hemisphaericaexon
TCONS_00072772-exon-scaffold_84-1491911889:169752..169774TCONS_00072772-exon-scaffold_84-1491911889:169752..169774Clytia hemisphaericaexon
TCONS_00072772-exon-scaffold_84-1510915933:169752..169774TCONS_00072772-exon-scaffold_84-1510915933:169752..169774Clytia hemisphaericaexon
TCONS_00072772-exon-scaffold_84-1575043694:169752..169774TCONS_00072772-exon-scaffold_84-1575043694:169752..169774Clytia hemisphaericaexon
TCONS_00072772-exon-scaffold_84-1491911889:169863..169968TCONS_00072772-exon-scaffold_84-1491911889:169863..169968Clytia hemisphaericaexon
TCONS_00072772-exon-scaffold_84-1510915933:169863..169968TCONS_00072772-exon-scaffold_84-1510915933:169863..169968Clytia hemisphaericaexon
TCONS_00072772-exon-scaffold_84-1575043694:169863..169968TCONS_00072772-exon-scaffold_84-1575043694:169863..169968Clytia hemisphaericaexon
TCONS_00072772-exon-scaffold_84-1491911889:170864..170975TCONS_00072772-exon-scaffold_84-1491911889:170864..170975Clytia hemisphaericaexon
TCONS_00072772-exon-scaffold_84-1510915933:170864..170975TCONS_00072772-exon-scaffold_84-1510915933:170864..170975Clytia hemisphaericaexon
TCONS_00072772-exon-scaffold_84-1575043694:170864..170975TCONS_00072772-exon-scaffold_84-1575043694:170864..170975Clytia hemisphaericaexon
TCONS_00072772-exon-scaffold_84-1491911889:171382..171491TCONS_00072772-exon-scaffold_84-1491911889:171382..171491Clytia hemisphaericaexon
TCONS_00072772-exon-scaffold_84-1510915933:171382..171491TCONS_00072772-exon-scaffold_84-1510915933:171382..171491Clytia hemisphaericaexon
TCONS_00072772-exon-scaffold_84-1575043694:171382..171491TCONS_00072772-exon-scaffold_84-1575043694:171382..171491Clytia hemisphaericaexon
TCONS_00072772-exon-scaffold_84-1491911889:171800..171871TCONS_00072772-exon-scaffold_84-1491911889:171800..171871Clytia hemisphaericaexon
TCONS_00072772-exon-scaffold_84-1510915933:171800..171871TCONS_00072772-exon-scaffold_84-1510915933:171800..171871Clytia hemisphaericaexon
TCONS_00072772-exon-scaffold_84-1575043694:171800..171871TCONS_00072772-exon-scaffold_84-1575043694:171800..171871Clytia hemisphaericaexon
TCONS_00072772-exon-scaffold_84-1491911889:172440..172719TCONS_00072772-exon-scaffold_84-1491911889:172440..172719Clytia hemisphaericaexon
TCONS_00072772-exon-scaffold_84-1510915933:172440..172719TCONS_00072772-exon-scaffold_84-1510915933:172440..172719Clytia hemisphaericaexon
TCONS_00072772-exon-scaffold_84-1575043694:172440..172719TCONS_00072772-exon-scaffold_84-1575043694:172440..172719Clytia hemisphaericaexon
TCONS_00072772-exon-scaffold_84-1491911889:173292..173525TCONS_00072772-exon-scaffold_84-1491911889:173292..173525Clytia hemisphaericaexon
TCONS_00072772-exon-scaffold_84-1510915933:173292..173525TCONS_00072772-exon-scaffold_84-1510915933:173292..173525Clytia hemisphaericaexon
TCONS_00072772-exon-scaffold_84-1575043694:173292..173525TCONS_00072772-exon-scaffold_84-1575043694:173292..173525Clytia hemisphaericaexon
TCONS_00072772-exon-scaffold_84-1491911889:174147..176726TCONS_00072772-exon-scaffold_84-1491911889:174147..176726Clytia hemisphaericaexon
TCONS_00072772-exon-scaffold_84-1510915933:174147..176726TCONS_00072772-exon-scaffold_84-1510915933:174147..176726Clytia hemisphaericaexon
TCONS_00072772-exon-scaffold_84-1575043694:174147..176726TCONS_00072772-exon-scaffold_84-1575043694:174147..176726Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072772-proteinTCONS_00072772-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_84supercontigscaffold_84:169188..176726 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
9.24833e-10 2.97633e-10 0.140847 2.42621e-09 0.498373 1.32995e-07 5.61536e-07 6.9229e-08 1.86572e-09 3.53881e-07 2.31338e-07 2.44466e-08 5.77949 6.51231 14.9129 45.8852 4.19011 4.65313 20.6984 14.0991 18.5754 20.1965 2.23033 1.87149 0.700807 0.857342 9.09687e-09 3.12424e-08 0 0
Blast
BLAST of TCONS_00072772 vs. Swiss-Prot (Human)
Match: TLL2 (Tolloid-like protein 2 OS=Homo sapiens GN=TLL2 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 7.865e-21
Identity = 62/181 (34.25%), Postives = 93/181 (51.38%), Query Frame = 1
Query:  124 VKQMENDGMFEGDMLLTPDQQMAVQNGF--------TSIKKNFWPRTI--YYD*EPTLANERSIL-DAIADYEKYTCFKFVKRTNEKDYIYF-FKGSGCFSGVGYFPGSGKHSVSIGPGCSSKGVVIHEIGHRIGIYHEQGRVDRDKYINIHYENIVEKYKYAFRKFSSSQVTSHGTIYDF 630
             K+   DG     +L +P    A    F        TS  +  WP  +  Y        ++R+I   A+  +EK+TC  F++RT+E+ +I F ++  GC S VG   G G  ++SIG  C   G+V HE+GH +G +HE  R DRD+++ I  ENI    +Y F K  + +V+S G  YDF
Sbjct:  116 TKEAGKDGRENTTLLHSPGTLHAAAKTFSPRVRRATTSRTERIWPGGVIPYVIGGNFTGSQRAIFKQAMRHWEKHTCVTFIERTDEESFIVFSYRTCGCCSYVGRR-GGGPQAISIGKNCDKFGIVAHELGHVVGFWHEHTRPDRDQHVTIIRENIQPGQEYNFLKMEAGEVSSLGETYDF 295          
The following BLAST results are available for this feature:
BLAST of TCONS_00072772 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TLL27.865e-2134.25Tolloid-like protein 2 OS=Homo sapiens GN=TLL2 PE=... [more]
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