XLOC_045038 (gene) - C. hemisphaerica

Overview
NameXLOC_045038
Unique NameXLOC_045038
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_8:488243..491091-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_045038 ID=XLOC_045038|Name=XLOC_045038|organism=Clytia hemisphaerica|type=gene|length=2849bp|location=Sequence derived from alignment at scaffold_8:488243..491091- (Clytia hemisphaerica)
GTGGTCTTCTCGGTCATAGAAGTTTAATGACCTGAATTATTTTCAAAATT CTTTTTGTTATTTGACGTTGTTTGAAGCTGTTATATTTAAATTTCAGTAA TTTTTTTTCTTATTTTTCTGCAGATAAATACAACACACAAGTTAAAGAAA ATAATTTTAATAAAATACAAAATAGAAAAAGATGGATATTCCACCAAATC AGACGATTTACATCAATAATTTGAACGAAAAAATGAAAAAAGAAGGTACT TATTATTTTGAAAGTTAATCCTTTATCAAGTTCCAGTCTATCTTGTCTCA ATTTCAACCAGGAGACTTTGTAGTAAATATTGCAGTCAATGCATCTGATT ATGCCTAAAAGTATATTAATCAGATTTTACACTCTTTATAGTAATTTGCT GATTTGCTAATGAATTTATAACATAAAATTAAACAGAAATTATATTTTTT GCTATTCTCTATTCATAATAAGGAAAGAGCTCTCTGTTCTTTGCTTTATT TGTCATTATAGGCTCTATCCAGCTCACTAATTTCTATCCTTTTCGAATTT TCTTCTTTTAGATCTAAAGAAACATCTTTATACTCTGTTTTCACAGTTTG GACCTGTCATTGATATAGTTGCAATGAAAACACCAAAGATGAGGGGTCAG GCTTTTGTTGTGTTCCGTGAAATTCCCATGGCAACAAATGCATTGAGGAG CATGCAAGGTTTTATATTCTTCGATAAAGCAATGGTATGCATTTTATTTC ACCCCCTTCGGGAAACAGTTTGAAAAAATAACCTTAGCTTATAGTAAGGG TAAAGGGGGGTAGAAATATTCAGAGGAACGTTTTGGCCACTTTGGCGTTT TTTTTTTAATATAGGTAATACTGGGAGGAAATTACACTAAATACACTTTG AGTCAAATTGTATTAATTTGTTATCTTAGTAACACTTATTTATACTTCTT TTTCAAGAGGATAACTTTTGCGAGAAGTAAATCAGATGTCTTTGCAAAGA ATGATGGAACGTATTGGACAAAAGGGAAAGCTGAAAAACGAAAAGCAGAA GAAGGTTTCTTTTTTAATTTTTAGGAGATTTCCCAAGTTATTATCAATGT TTCATTTGAATAAGTTTAGGTGCAACCAGTAATAGTAATGGTCATACCTA TCTTCGAAAACGTTTTATTTTTTGGTCTTTTTCTGTTTACTCATTCAAAG GGGGACATCGTCCAGGTCTTGTACTCCTGAATTTTTTCTCATTAGTGTGT ATTCTCAAGTNGGGACATCGTCCAGGTCTTGTACTCCTGAATTTTTTCTC TTTAGTGTGTATTCTCAAGTTTTTTTTATGGCATTTTACTTATAATTGGC TTTCTATTTCTCTAAAGCACGTAAAAGACAACTGGCAGCCAAACAAGCTA GAAGAGAAACAGTACCAGTTAAAGGTTTGTAATGACATAGTTTACCTATT CAATTTATAGTTGTTTTCATTATAAGTTCAATAGATTATCAACTAAGGAT TAACATATTGTTTGATGCAGTTTGATGTCATAAATTTTGTTTGTTTTTTT TAATCGGAGATACTTTCGTATGAAAAATGATCATGATTATCTTTATTTTC TTAGAAACTAATGGCCATACACCAGCACCGCCAGCACCGAATGAGACTAA TGGGGATAAAACAGATGAAATACCAACTAATAATATCTTATTCTTATCAA ATCTTCCCGATGAAACGACACAAATGATGTTATCTATGTTGTTTCAAGAG TGAGTTGATAGTTTTAAGTGTTTAGTTGTCTTCATATTTTAATGCAGTTG CCCTCTGAAAGTTTTAAATGTTTCAGAAAAGTCCCTACCCTAGTACACAG CAGGCAATAAAAGATGGGTCTATTTCAGCCTTAAGGACTTAACTTGATCA GTTGAATCTATACGAACAGATTTAAAACTTTTCAAGAGCCAAGCCAAGAG TTTTCAATTTCACCGTATAATATGTTTAAAAAGTAAGTTTTTTTAATTAC CTTTTGCCCTATTGGAAATCTTTAGGATGTCTGTGGCTTTTTAAAGAAAA ATTTGAAACAACCATTTCACAAGCAAGTCATTATACCAAAAGTACACAGG AATTGATTAAATTGAGAATCTTTTTTATTCGTTTAGGATGCCTGGGTTCA AAGATGTACGGTTAGTAGATGGGAGGGCAGACATTGGCTTCGTTGAATTC GACACACCATCACAAGCACAAGTGGCAAAAGATCAGTTAGACGGCTTCAA AATTACACCTGAAAAAGCGATGGTCATTAAATATGCTAAGCAGTGATGAC GAATTCCTTAAACTAGACTTGTTTTTATATACTAAAAATATTCCTATAGA AACAACTGTCCTAGCTAACCCAAGATAGCACATGTAAAAATTTCATGTCA GGGTATTGAAGGGTCAATATTTCTAAAACTTTAAAACATATCAAATATGA TTTTTAAAAGCATCAGGCTTGCCAGTCAATTTATCTGGAGATGAGATTGT CATCATCACCATTGATTTGGCTACTATGAATATACGGGTCCTCATATTGG TAGTGTACGTTTTGTGGCCTTGGGTAGCTTATTTCCCCAATAAGTTGTTT TAATGTCATTTAGACCATACGATTTTGAACAAAGAACTTGCTGGGGTCAC GCTACTATTCAAATGATTTTAATGGACTCTTAAAATGTGTCAATTTTTGT GGCGTTTTTTTAGTTAACAATGTAAATATATTTTTTGTTTTAAAAGTGGT ACTTTAACAGAAAATATAGATTCTTTATTTTTTTTTTCCTTAGTGCCAAG ATCTATGTAACAAAATGAGAAAGGACAAAAATCTTTCCTGAAATTCTAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00072578TCONS_00072578Clytia hemisphaericatranscript
TCONS_00072577TCONS_00072577Clytia hemisphaericatranscript
TCONS_00072576TCONS_00072576Clytia hemisphaericatranscript
TCONS_00072575TCONS_00072575Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00072577-proteinTCONS_00072577-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_8supercontigscaffold_8:488243..491091 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
SNRPB2U2 small nuclear ribonucleoprotein B'' Homo Sapiens
SNRPAU1 small nuclear ribonucleoprotein A Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
60.35 59.94 120.48 131.07 80.56 65.53 45.81 46.86 40.42 38.54 30.36 25.94 14.69 16.24 22.07 20.64 42.2 33.2 7.45 11.16 22.37 23.4 45.03 39.81 19.09 20.78 15.42 8.96 27.39 28.37