XLOC_045025 (gene) - C. hemisphaerica

Overview
NameXLOC_045025
Unique NameXLOC_045025
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_8:68870..72969-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_045025 ID=XLOC_045025|Name=XLOC_045025|organism=Clytia hemisphaerica|type=gene|length=4100bp|location=Sequence derived from alignment at scaffold_8:68870..72969- (Clytia hemisphaerica)
AATCAAACAATAAAACAATGATGGAGGCCAGTGATAGAGTTGATCGTCAA AAATATCGAACACAAGAATACTGGGAAGAAAGATTTCAGCATGAGTCACA AGTGAATGAAGATAATGAAAATTCAAATGGAGCACATGAATGGTTTTCTA CCTATCATTCTTTTAGCCATATTGTCACTGAAATTTGTCCACCTGACAAG TATAAAAGGATTTTAGGTAAGATTGAAGTTCTTGTGGATAAAAAACTCTG TAACAAGCACCTTTATCCGTTCATTTTCATATTTCAAGAAGTTGACTTTA GCAAATTTTAGTCCGTCAAAACTTTCATTTTGATAAAGTCTGCTTTGGCA TCATGACAGTATTATCATTGTGTTACTTTTGTTACCTTTTCAGTTCCAGG AAATGGCAATTCTTCACTCTGCGCTGAGCTTGTTGAAGATTATCCGAAAA GTCAAATTATTGGTGAAGATTTCTCACCGTCTGTTATCCAATATATGTCA GAAAAATACAATGAGATATCAAATTTATCTTGGTTTGTTGGTGATATAAG AGATATCCAACTGCATGGAGCTTCGAACACAGAAAATCTTTTGTATGACA TGATCATTGAAAAAGGAGTAATAGACGCTCTAGTGGCTGGTTCAAAATCA CCTTATGCTTCATATTTAGATCCTCAATGTCTAATAGATGTCGAACAGAC TCTATTGTCGATTCGTAAATCACTTCATCGAGAGGGTCGATTTCTATCGA TAAGTTTTGCATCACCAATGATTCGATTACCCTTATTATCTGGTGTTTTT GAGATTTTGGTTCATAGTTACATAAGTGAGATGAGTGGCTTTGAGTATTA TGTGTATGAATGTATAAATTCAATCTGTGACAATGATGTGGATTTTCGTA AAAATATGGAAAACGAAATTTTGAATTCTGATCCAGTTGATTTGCCAGAG ACTGATCCTTTGGCTATTGGAGATGTATTTGCTTAATTTTCTTCTGGTAA AGAGTAACTTTCAATGAATGAACATCAACGCACATGCTTAACACGTAAGA CAAGTAATGACTTTTTATGTTTTTGTGCAGAAGATTTCGATGAAAGACAA GATAAAATCACAGCAATCAATTGTCATGGGCTTGTATCTCTCATAGGTTA TCGAGTTATCTGATATTCTTCTTAAATTTCAAAATTTCCTTTTCTTTTTC AGGTAACCTAAATTATCACACTTCACTTTCAAGAATTACAAAGTTGGCTG GCTGATCGGTTGTCAGCTTTGAAAAAAAGCCTTGAAATTGAATGCTGGTT GGGACAAAAATTCACTTGATCTGGTTTAGGTATTTTATTATAATTTTACA TTTGGCTGGCTGATTTTATAGCGGAATCATTTCCAGTTTGCAAATGCTGA GCATTACGAAATTAATAAACATTTTGACGACAGAAACGAGAAAGAATAGG ATCCAACATTTGAAGTCATTTTCCAAAAATCTAATAGGTCAATCAGAATA TTAATTTGGGTCAAAAGGTTGATACGATAATATGATAAGTGTTTGAAGGT TAAGCTAACATCTACTAGGTGTTAAGATATTTTTTCTTGACTAGAAACTT TTGGAATGCTCCTGAAATCTCAATTATTCTGTTGGACACGTCATGGTGGC TAATCATGACTCTTTCAGAAGGGAATTTATCTATTCAACTCTGACATCTT AAAACCACTCTTGAAAAATTCATTTAATCACATCTTTCATTATACCTCCA TGATAATTCCTTCCATATGAAACTCTACCATATGAAACATGGATGGAGAG CCTTTTCAATCGCAACTCCAGGTCCTCTTGCATGATTTCAACTGTTTTTC TTCCATTTCTTTTTGGACGAGCTTTGTTAGTTCTCCAAGATTTGATCCAC TAAATTTTTGCACTTTCTTAGCAAAATTTGTATATCTCGGGACTTTCAGC TGCTTTCAGACATTTTCGGTGACTGAAGCTTTGATTTTGTCTTTCCAACA AATTTTTGCGTCATGTTCCATTGTATCTCCATGCTGGTTTGTCTTTCAAA GGTGCTAGTGCATCATATTAGCACATTGATTTTGATTGACTTTTTAACTC CGATCGACCATACTAATTTTAATAATTGTTTGTTATGAAGAAAACATTAA GTATGTTGGGCTATAAGTTAAAAACTGTTTACATTCATTAAATTAATTAA AAAGGAATATATCACAGCTTCACTCATTTTTTGAATATTTTCTATTTTCG CTCATGAAAAATCACAAAAATTTGCAGGAACCTGTTTGGAACCTCCTCAG AGGTCCTATAAATTAATACATGTTCGTTCCATCCGTCCATCCGTTAGTTC AGTTGAAGTTATAGTGAAAGGCTTGGTAATCCTTTTTATGCCATGTAACT TGACATTTGCTTCTCCATTTCCTTTATAGTTGGAAGTACGATAGGTTCAG GTTTTGTATCGGCAACTGCATGTTTAGCTTTGAATGTTCCTTTGGATTTT TTCTGAACACCTAGGTTTTATCGATTTTTCTAGAATCAAACTTCTTCACT CTATCGATGAATTTCCAATGATATGTTAATTACGGGTTCTCTTTCACAAT AAAGTTAAACTTCTGTTTTTATTGTTTTATACTATTTGAAAGGCTTCACA AGGCAAAGTTTCTTATTTATAGTAAATTGTTGGAACCTCGATGGTTCCTG ATGCTTTTCAGGTTTAGTGTATTTCATAATATAATTTAAAGAAGCTTGAA TTTTAGCATCTTTTAAAATCACAAAATCGTCCCAAGAATGAAAACTTTGG TCAAAAGAATGCTTAAAATAGAAACAGAATTCACACCTTTTCCTTAAGAA CCAGGTGTTCTTGCCAATGTATCCCACTTTTTCAATTATGATGAACTTTT TTGATATGGAGTATTGCTTTTGAAGGTAAAGAATAAATTCCTTCACATCG TCCTTTTTGACTTTGCTCCCCAAGGTTATGGCATAGCCAAAAGCTGACGT CAAGCAGTTTTCCAGGTGTTGGGTGGTAGTGAAAGCATCGAAGTCTAAAA CATAGTCCTGTTGATAAGACTGGATAAGATGAGAAAATTTTCGTTAAAAT ACAATGCTTAGAATATAAAGACAATTCACACATTTTCCTTTAAGAACCAG GTGTTCTTGCCAATGTATCCCACTTTTTCAATTATGATGAACTTTTATGA TATGGAATGGGTTTTTCCAGAAAAAAATCGTGCACCCCCTGTTGAGGAGG TCCATTTCCGTTCCAAGGGGGGTAAGGTTTGAAATGCAGTGGAATTCCAT AAAAGGGTAGACGAAAATCCGTCAAAAATAAGCTGAATTCCAAGGGGGTA GTGATTGAAAATTTGTAAAAATTCGGAATTCCAAAGTTTTAAAAACTTTT TTGATGGTAAAAGAAATTATCAAAATTCACACTTCAACTTCTTTTAATGG TAATGAATTGTAGGTTTGTAGCCTTTTCTAAGAATAAAAGTATTTTTTTA TTCTTGAAGTCATCTTTTTCTGCTTTTTTTTGGTTTTTTTTTTTTTTTCC TTTATTTTCCTTATATTGTAACTTTGTTTGTCTTTTCCACCTTCTTTCAT CCATATGAAATACGAATTCTTTAGGAAATGATAGTTATTGAGTTATTTCT TCTTTTCTTATTGTGGTTGGATGATGAAGAGAAATAGAGGGACAGTTTAC GGAGGTTCTCCGAAAATACGATTGTTTTCGCTCCATATAGAATTGACGTT TTATAATTTTCATTCCGCGATGAAGAAGGCGTTGAATTCGTCGTCCCACT TACTTCCATCACATTCGAATCCTTAGAAAAAGAAGTAAAACATCAATGAT AATTTGACTCCTATTAGAGTATCACTCTAACCTGCTATGTTTCATCAGTC TGCTCAAATTCAAATAGTCAAACAAGAAAGTTTTGGAAATTTCTAATTAA ACTCCGTACGAAATATTCAAAATCTCTTACCAGACACCATTGGTGAAGCA GGTCAAGACAAGAAGAATATTGTGAGCTGCGTAAGCTTTTGTTAGGGTGT ATTTCGTGTTATTACCCATCAGATCACTCGTGACGAATTGTACGAAGGAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00072554TCONS_00072554Clytia hemisphaericatranscript
TCONS_00072553TCONS_00072553Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00072553-proteinTCONS_00072553-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_8supercontigscaffold_8:68870..72969 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.09 2.09 2.67 3.34 2.85 1.77 0.72 0.71 0.22 0.41 0.57 0.12 0.12 0.08 0.07 0.16 0.29 0.2 0.37 0.07 0.34 0.25 0.65 0.73 0.42 0.5 0.06 0.19 0.44 0.69