XLOC_045011 (gene) - C. hemisphaerica

Overview
NameXLOC_045011
Unique NameXLOC_045011
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_79:57177..61066-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_045011 ID=XLOC_045011|Name=XLOC_045011|organism=Clytia hemisphaerica|type=gene|length=3890bp|location=Sequence derived from alignment at scaffold_79:57177..61066- (Clytia hemisphaerica)
AATTTCTTAAGTTGAAACTTTTTGTTAGTGGTTTAGGATAGAATGAACAC AAAAATCTCCCATACCTGATATTGACATTTTTAAATATTTTCATTTAGAA ATATAATATAAATAGAAATAAAAATATAAGATCTTGACAAGGTCATGCAG CTAAAGTGTGGTGTAAATGACCAAACAGTGTACTGGACATGTATTGTTAT TTCATAACAAGTTTTCCAAAGAAGGTTAAACCATAAAACATTCATGAAAA CCTAATGGTCATGAGAATTTGTTGAAAAAACTTTTCCATTTAGGTAGAAA TTTGTACCATGATATATTACAAGTCAACGTTCATGGTGTAACATCATCAA TTCTTTAGGTAAATCTAAGGTAGAAAATCTAAGAAATCTTTATGAAGTCA AGCTAGCTGAACAATGGACAGAGAAGAGAGTTGATGGACACTGGTTGTAT TAGTTTTACCCCTCGGTTTACAACACAATGATCAGGAACTTTTCCTCGCT TTTTGAAAAAGAAATGAAATTTCAGTGCTAACATGGATGGTAAATGGGAT ACTCATATAAACTTTGTAATTGTAATGGTTTGAGATAAGTGTCGTATAAA ATGTGTTGATGGTAAAACTGAAACGAATTTTATCACTTGTGATGAAGCCA AAGTGTTGCAGGTACCATATATTTGTAGTTGTCATTTTTTTCTAGTCCTC AACATTGTGCTAAAAGATTTTTATCAAACTTTTTATTTACTTATGATGTT TTTTAATCCAGGTTGGTCAGGGTAGTACACAAAGATAATGACAACCTGAG GAAAGAAATCCCAGAAAAGATTTGTTTCTTTGGTGATAATGTAATCATTG TTTATTTGACTGATGTTAACATGAAAAATTCTGCCAAAATTAATTTTAAG ATTAATGTAGATGTACTAAATACTGTAACTTTTAGACTTCTACACAGATG TGTATCTGTCATGGTGAATTTTCAAATAGTTCCAACTACTTTGGATGCAC ACAAATTTATTCCAAACATAATTTTGGAACAGACGATGAACGTGAAACTC AGTGCCTTGAAGATGACATATGGTTGAAGTATATATAAGAGGTAAAATAT ATCATCTATGTAAACCGGATTGACGAGATTCCTGTATCATAACAAGAACT TGTGATTGTTTTGGTGAATATGGATATGGAGAGTCATTCAAAATCGATGT TCTCTGATCAGTATCTCGAGACTTGGAAAAACAAAGAATCTCTCATTATT TTCAAAGTGGCAGGTTTGGATATAGCAAAATTGAATGCATTATTGCTATA TCATCACGATGCGGATTGGTGGGTCCTGGATATATTTGAAATGTTATTCT TTGAAAGATTTCTTCAACAACGACATTGGATCTATAAATCTGTCCCATTT TACTTTGTTTACATCATATCCAGCTTCTTCTCAAGCATTTTTCCTGACAA AGAATGAAATAATTTGGAATATCAGGCATGACTATGAAAAAAGGCAGCTT TATTTGCTATAAAAACCATGTTCGCGTGATGTCAATTCATTGGATTTCGT AATAAAATTCTAATTCTTTTTCTTGCATTTTGTGCTTGACCAATATTACT CTAGATAGTTGATATTGTATTTCATCTGATCATGATTTTTAAACACTGAT TTTGTTGCGAATGCTCTTAAAACAAAAGATTGTCACATCTTGTTTTATAA AATACATGATTTTCGCTCCTTATATTTTACTGATTCTTAACAACCGATTT CATTTAATCACTCAATCTTTTTTGCTGGGAATTTAAAAATCATTCAAATC TGCAAAACTTCAAATCAGCATACCAATGAACAATCGATTAGCTTTTTAGT TCTTGTCAAAATTATTTATTTGTTTCTTTTTAAAGGGATTTTCATGTAGT ACTTTAATGGGATAAATTTTCGCGGGGATTAAATTTCGCGGTTGAGCTCA TCCGNTTCAAATTTCCAACGGGACTTATTTTCGCGGATGACACCCAAATC CGCGAAATCCGCGAAAATTAATCCCCGCGAAAATTTATCCCATTAAAGTA TTAAAATGCATCTAAACTGTTACGTATGCGGATCTACACTGGCGAAACAA TGCACTGGATGCCATACAATTTCATATTGTGGTAAAGACTGTCAAAAGAA AGATTGGCCATTCCATAAAAATTCCTGCAAGTCTAGAGGCGTGAATGTAA TAGATCTCCTTATCAAGGAAGGAGCATATGATTTTCTTGTGATCGTCAAG AAAATATTCCATTATCTATCTGGCATTGATTTACATTATGTACGATGTGT GAAACGTTCTTGGCGTGACTTCATTCAATTGATGTGGCAATCTGAATCAG ATCGAGATTTGTTTGAGGCCAAGTTGGAGGAGCAATGGCTATTAGAATTT CCACGTCCTCGCATGATTTATGAAGGCTTCGGTAACTCTGCCGAGAAAAT GAAACACAGTGACCAAGAGTTGTTTCTCTCATGTGTCAATGAGAGCGGAA TACTTGTACTAGACATGGATGAAATGTACAAAGTGACATATATTTCTCGA TGGCAAACCAAAGTGAAATATACCATACCGGTTGAGAAACCTTTTAATAT CAAGAGCATTTGGGATGTGCATAAGGATTTCGTGATGGTTAGTGATAAAG CTGGTATCAAATGTTGGAATCGCAAAACACACAAAGAAATGAAAATCCAT GATCAATCTAACTCATTGCAGGTAGCCTTACATTCTTCCCAACTTGACTC AGAACATAATTGGTAAACTTCTTTTTTCAGCTTTATGGCCAAATTTGTTC ATTCGATCTGCCCAGCCATGGTGCAATGTGACTACAAACTCCAGATAGAA GAGAGTTAAACACGTCACCTTATTCACGCTTTAACTTTGATTTTCCATTA TTTTTATAGGCTGGTATTGGGTTAACAAGAAGATTCGCAGGGAGAGGCAA GAAGAGAAAAGATGTTGCTCAAAAGATTTTTATTTTTGGTGATATAGTAA TTGTAGTATATATCAGTGGTCTTTTCTTGAAATTTCTGGCTACCACAACC CCGTTGGGACCTGGCAAAGATCAGCGAAACACCGTGACTTTTCACCTCAT GCACAGATTCGAAAAGCTCCTTGGTCAATCACCTGATATTTCTGACCACA TCCAAATCTCTCACAATCCAAAAGAAGGATACCCTGAAGGCCGTTCACTG ATTTATTCAAAGTTTTACCACAACAATGGTGGAGATCCTGAAGGTGGTAC TATTTGGTGTCTGGAAGACGATGAGTGTTTGCATGAAATTCATGATATTG ATAATATCCACTCAGTGATTTGTGTTAATGGTGATGAGTATGTAATGGCT TCAGGAGTTCTCTCTTTCGGAGACACCTATCTTGATTTTCGGCGAAATGG GGAAATGGTACGTGACATGTTGGTCGGTGGTGGACTCAGAGATGTGCAGA TGAATAAGTATTGTATTGCTATACTCTCTAATCCTGGCTTCAGGAAAGTC ATGCTTTTGCAATTATATCGCTTTGAAGATTTTTGTGAAGGTTATTCCAT TGACTTGAAACCAACATTGACGAGAGAGTTTGATGTACCCATCTTTACTC TTTACATGACAAAAAATCAAGTGATGTGGAGTCGTCCTGATTTTTCTTAT TATGAGGACGAGAAAGACAGAAAGGATGATTCAAAACATGTGGTGATGTC ATTAAACTTCTGGTATGCCCCCTATACCGGACGTGGATGCTTGTAATGAT CTTTATTCTTCAACTTTTTACACGTTTATCATAGACTTTATTGCTATTTT TCATACGAAAGCTACTGATAAATTGTTCATATTTTGCCTTTTATCAGTTT TGACTGTTTTTTTACTTACTAACATATTTTTCTTGTTTTC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00072531TCONS_00072531Clytia hemisphaericatranscript
TCONS_00072530TCONS_00072530Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00072530-proteinTCONS_00072530-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_79supercontigscaffold_79:57177..61066 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
7.53 7.36 5.54 5.68 11.14 8.68 9.7 10.19 6.43 6.25 6.6 5.63 4.99 5.72 6.4 6.13 7.26 8.1 2.97 2.63 7 7.39 7.89 7.87 7.42 8.05 11.1 7.42 4.88 4.36