XLOC_044929 (gene) - C. hemisphaerica

Overview
NameXLOC_044929
Unique NameXLOC_044929
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_77:129465..133385+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_044929 ID=XLOC_044929|Name=XLOC_044929|organism=Clytia hemisphaerica|type=gene|length=3921bp|location=Sequence derived from alignment at scaffold_77:129465..133385+ (Clytia hemisphaerica)
TAAAGCttaggaaaaactttttttgaaaaaagaattgggCAAGAAAGAAG
TAACGAGAGGAAAACTCCTAAGTTTTCGTGACTAAAAGGGCTAAGACAGT
GTTCAGCTCAGCACGGTGCACTGGGAATTGGCTGTTTTATTGTCGAAAAT
CTCCTTTGAAAGAATTAACACTATATTAACTCAAGTAAGTAATCGAATga
atatataaaataaaaatcaggCTTCAAAGCCGCATGATGCAAATTTAGAT
CTCCATTTCTTATAAGAGTCAAGAAATTTGAGGAATAAGGTTAGCAAAAG
TGTGTTATTTGATGTCGAAATACATCCAGTATTATTGGACATCGTTTAAA
GATTTATTGCGATTAAGATCAATATACATCAAGGTTACAGCTACGAGAGA
CCTTGAACCATAAACACATGATAGTGTTGTTCTTGTGGGAAAAGGTGCGA
TGAAAAGTTGGTTCTTAGTAAAGCTCTCGCTCAAGGAGAGATAATTTTTA
TATCAAACTTATTCCAAAATGATTAgtgttaaaaatgaagaaactgTTAA
CAATACAATGAATAATGTAAGGAAAACCAACTTTGCGCTTTTTCGCCcct
aactttttgagattaAGGCTTTTTTCCTTCGTTCACTCCTTTCTTTTGTC
TTCCAGCTTTTTTTtacttcttgatttttttttcatctactCGTTTAATC
TTCATTTCATTAGCGTTTTAAATAGAaacacaaaaaattaaattagcaAA
TTTGATTCTTGAGCGCTTTTACAGTTACAGTTCGATTAAAGCAAGGAACT
TGGTTAAAGTTAGGTGGTTGGCGAACTCTCAACAATAAATAGATTCGACA
GATGAGGTAACGATTCCTTCAGTGTCAGCAAATGTTTTAATTAAAttggt
ttttgatttttgttcttTGATATATCAGCTAAAGTTTTGATTAATGTAAG
TAAGAGCCGCGAAAAGTGTTTCTAGTTACGTAACACCAAACAAAACATCT
TTTCGTATTCGAAGCAGATTGTTCGGAGGGGTTTTATCAgttttatcatt
tgaaaatctctacAACTTCTTACTCGATCGATTCCCCTTGCCATTTGAGT
TCTATGGAGATGTTACTGTACTGTAGTAGCTTTGTTGGAATGTTAATGAT
CACTTTccaaagagagaaaaagaagaataattTAAGTTATCAAAACCTTG
AAGGCTCAATATCCAATAAGAATCTAGATGGAACGATATCGAGGCTCTTC
CTAAAGTTAATCTGGGTAGCTTAACGCGCTTAACAACATTTATGTCAAAG
GTTTAAAGGTTTAATACTCGGCCAGACTCGGCCCCACGCGCTTCGAGTCT
TTAAGTGTGTCTTTAAAACAAAACTCAGTTTGCACGGTCGTGATTAAACG
TTTCTGCTCGAAATATTAAGTCAAGATTATTGTTGTAATAATatcgtact
ttttcatttgtttttaataatcggaaaagaaattgtgaaatttttttgat
ttttcatttctttatttgcttgtgaGATACTAAACCTAACACATTTTTGT
TCTTtgaagagagagaaaaaatgttttggcGAATTTCTGGTTAGTTTACa
gactttcattttaaaaagagattttattTCAACATTTATTCGTGTATCCC
ACTGTAAACTTTTTCTAAGGTCANgctttcattaaaaaaaaaaactttca
aacttttattCGTGTATCCCGCTGTAAACTTTTTCTAAGGTCATTTTTTC
TGATCGTCTGAAGAACTATTTCGTCATTTTCACATCCGAAACTTTTCCAA
GAATCAAAACCATTTGAAAGGATGATCATTTCTAAATATGGTCAAATTCA
TTACATCAACACAGCGGGTTTCTCTCATAAATGGCCATTTCCCACTTTTC
CGGAATCAAGAACCTGCCTATCCACTCTCAGGCTTTACCTTGCTTTGACT
TTacttttttcacctttcagGTAAATGAAATTGATCCACAAAAACCGTAA
GAATGAaagtaaaaatgtttttgataacAATCTTGTTCGCTGGTCTTCTC
CACATCACAACTCTGGTCATAGCTTCAAACGAAGCACTTACGCCAGACAA
TACAacacttgaaaaaaataacacaaCACTCGCAACAGACAACGCAACGC
TTGCGATAAATAACCAAACACTTGGACAAAATGATACTACAGTTGCAGCA
AATAATACCACCATCGGTAGCCATGGCAACAACCAAAATATAACATCGGA
AACAGATGAGACAATAGAGACGACAAAAGAAAAGGAGAATGGAACTAGCa
ttgaagaaaaagaattaCTACATGCGATCTTCTGGGAAGTCAAACCGTTC
ATCTTCAAGAACTCGAAAGGAGAGATTGATGGAATCATTCCACAGATCTT
TGAGCAAGCAAGTGTCTTTTGTAACGGTCGCAAGCCTTTCATTCATTATA
AAGTGAAAATGGATTCAAGGCGTGACTTTTATGATCTGGCTCGATCAAAC
GTATCGTACCATTCAAACACATCCGTGTTAAAAAGTGTCGACAAACAGCG
GGCTTTCTGGGCCCCAGTCCTCTCCCCTACTAATACAAAGAACGACGGCT
TTCTTAAAGAGCGAGCTCTCAGATCAtttcaaatcttaaaaacaacCCAC
ATCAGTATTATCGTGAGACGGGACTTAATTTCATTACCTAACAAAATTTT
CCGTGGCATCATGGCGTGCGAACAAATTTTCGTTCTCGCAATTTTGCTAG
CGATTATTGTTGGTATTTTTCTGTGGGTCATCGAAAGATACCAAAACACC
GATTTCCCGAATTCCTTTTGCCGAGGCGCGATGACTGGTTTGTATTGGTC
GATTGTTTCCATGACGACGGTAGGTTACGGAGATATTCAGCCGTCGTCGG
CCGTGGGACGATTCGTGACGTGTTTCTGGTTGTTCATCGGAGTTATGGTA
GGTTGTGTGATGACTGCAACGGTGACGGACGTCGTGGCTGGAAACGATTT
TGATATCCAAAATAAAAAGGTAGCTGTACTCGAAAACTCTTTTGAGGAGC
GAACAGCGGAGAAGCAATATCGCACTAACGTGGTATCAGCAAAATCGTAT
GATGAAGTATTAGAAATGGTACGAAAACAAGAAGTCTTTGCCGCCATGAT
GAATTCAGACGTAGCCGCATGGTATGACGAAATCATAAGTGATGATACAG
CGGAAGTACCTTTGAGGATGGTTGCTAAGTTACCGGCCAATCTGTACGTA
CATTGCTTGTTACCAACCGATCTCCTCCATAAGATGAAGGTGATCTTCAA
ATGCATGTATTACCAGAAAGATGAAGTGTACACGTTTGCCGAGGAGTCTT
TCAAAGTGCATCATCATCCGCAGAACATCTACATCGGTTCCACAGGTGAT
CTCATGAGTGAGAATGTCTTTTGTCGCGCTATTATCGGTTTACTAGCCGG
TTTGATCATTCTCGGTTTCGGATTCGATGGTTGGAAGTATGTTCAGTTCC
GAGTGAACACCAAGAAACACGGTGCAACAAACGGGGAGAATAAAGAAATG
ACCAAGTATTATAACTCAGCACAAGCAGCTGCACTCATATAAGACAAGTT
CTCTCGTTGAGACACCTGTTAATAACATTTCCAGTTCAAAGCAGCGAGAA
GGATGAGTAATCAGAAAGGCTTATCTAAAAAGCAGCTCTTAGCAGTATTC
AATGAAAGAATAATTACACACAAACAGAAGCCCAGTCCGTTTTAAACTGG
GGATTTGACAACTCTTGATGTCTTTTGACTATTATTGACCGAAAAACGGC
TAAGCAGCGACAAAGGATAAAAAATTGATTCAGAGTAAATTAATAATGag
caaaattgttaaaattgaaCTGTATTTTGATAGGATAAGTTTGTGTATAT
TGGTTTTCAAAAAGACGAGGT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00072355TCONS_00072355Clytia hemisphaericatranscript
TCONS_00072356TCONS_00072356Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00072355-proteinTCONS_00072355-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_77supercontigscaffold_77:129465..133385 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.02	0.06	0.02	0.09	0.03	0.04	6.15	5.09	7.42	5.39	4.05	5.46	0.5	0.41	0.03	0.01	2.4	2.36	0.92	2.69	5.39	4.4	0.79	1.27	2.76	3.96	0.11	0.06	0	0