XLOC_044835 (gene) - C. hemisphaerica

Overview
NameXLOC_044835
Unique NameXLOC_044835
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_71:1117185..1125670-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_044835 ID=XLOC_044835|Name=XLOC_044835|organism=Clytia hemisphaerica|type=gene|length=8486bp|location=Sequence derived from alignment at scaffold_71:1117185..1125670- (Clytia hemisphaerica)
CAGGAAAAATAAAAGAATGGATAATTCGTATTTATCCAATTGGAGACCTC CAGACTTTTAGATTCATACATTGCAACACCTTACCAAGATGCTTGAGGGA TATATCACTCCCCTTTTTATGGGGTATGTTGATAAATATATTAAAAATTT GAAACCGGAAGATCTAAGTCTTTCACTGTGGGGAGGAGATGTGGTACTTC AAAATTTGGAGCTCAACCTGGATGTTTTGCAAAAGGTAAGAAAATGTAAT CATTACATCAAATAACACAGCATGTCAACTAATGCTCGTCGCTCTAGCTG ATCCCTTACGAATCGTTGTATAATTTTCTCTTTTTGAATTTATATGACCA AAGTAAAAAATCAGGTGCCCAAAAAAAAACTTTCAATTTCCATCTATACA AAGGTTTTAATCTATATTGGAATCGTTTTTTATAGGAACTAAATCTTCCA GTGACTTTTCTAAGTGGAAAGATTCACAAACTACAACTTCACGTACCATG GACGAGACTGATTTACGAACCAGTTGTTGTCACAATCAAAACAATGGAAT TTATTATCAAATTAAATGATTCAGGTGCACAAGCAGAGCCTGAAAAAACT GATGTAGAAACAGAAAATCAAACCCAAAACAAAATGGATCAGACGACAAC GCCATCAGAAGATTTACCACCTGGTTATGTTCAAAGTCTACTTAATAAAG TTGTCAACAACATTTGTTTCAAAGTTGAAAACGTCATCATCAAATACGTG GAAGATGACATTGTCTTCTCGTTGAATGCAAAATCTGTTGATTATTTTTG TGTTGATTCAGACTGGAAAGCTGCGTTCATTGATTTGGTGCAGCCAGAAC TGTTACTTAGAAGGATGTGTACTATTACTGATCTAACAATTTGTTTGGAT CAAAGAACCACTAGTGGGAAAATCGATTTATACCAAGACCCTGTACTATA CAAATGTAGCCTCACAAGTCGAATTGTGATGAGACACCGCTCTGTCAATA GTACTAAACCTATCGAGCAGAAGTTTGATGTTTCCTGTGAAAGTTTGGAT TTCTCTTTGGCTGATCTTCAAATTCCAATGGTATTAAGGCTTATCAAACT TGTTATTGGTTTATTTTATGGTACTCTTGATCTTCCTGGTTGCAATTTTA AGAAACACTCAGCCCCTATTGCTATTGAAAAACAGAAGAATGCTTCAAAT AAAAGTTTGGTTGCGCTCACTGAGAGTAAAGAGATTAGCGCCAATGACAG TTGGTCTTCTTGGGCATGGTCTATGTTACCAGTAGCTTCCGACGGTCCTT CAGAACAAAGCTTTGAAGAAAACATAACTTCATTTGGACTCTTCATCAAA CAAGTCAACTTGACTTTAAAAAGGACAAGCTTCTTACCAAACATGCTTTC TGGCCAGCGAATTGAGTTTTCACCTGTTATGGGATTTGAGCTAAATGGAT GTAATTTAAACTTCACGTCAATCGGGGACAGTATTGTCAATGTTAATCTT GGCCTTAAAATGTTGACAGGTTTTCTGTTTGGAAAAAATTGTTTGTGTGC AATGGATGGTATAAAAGTAGCCGAAATCTCAGAAGATTCAAATCTAGAGG TTTGTATTTTTTTCTATTATTGGACTGAGGTTAGCTGAGCTTGCACATCT GACTATAAAATGTGGAGGCAGGGTGTAAAGTACGGGAATACCGGTGTACG GGCCTAGAATTTCTCAAATACAAGTCAAAACTATCCAACGAGTACCGGAA TCCTGGAAATTTGGCCTTTCAATACCGAAAACCAGTCTTTTTTGGTCTGA TAGCAGAATACCGGTCGATACTGGNTATCCAACGAGTACCGGAATCCTGG AAATTTGGCCTTTCAATACCGAAAACTAGTCTTTTTTTGGTCTGATATTT TCAGAAGCATGCCTATAATGAAATGTTTTTATCATATTCTTTTTACATTT TGAGTATTTCATATTCTTCCTTCATTTTAGCACGAACTTTTCTTGAAGAT TGGTGTCGAGTCATCACAAGATTATTTAAAGGGCTCATTGTTTGAGAACA AAGAAATAAACGTCAACGAAAACCCTCCTACATCAGAGGAAGCTGAGAAG GAAAATTCGCTAACAACAGAAGAATCAAACCAGCCTCCTGAAGATCAACA ACAAGAAGAAGAAGGGGAGGAAACAAATGAATCTTTATCCAAAACAAAAT TTTCGGCTGACGCCAGATATCTTGTCCAACAATCGCGTTCACCACAAGAA AACGAATGCATATTCTTCAATTATTTTTATGAGATGAAACTTCCAATACC AACAAATGAAGACAATGAGAATATCTTTTTATTTCCAAACACAGTGGAAA AGATTGAAGAGATCTCTGAAAAGAAAGTCGTTCTGAATTCTTGTCAAAGC GTCATTTCGACATCTTTGATTCATTCTTTGGAATGGTTGAGTGGAATCCT TGATACCAAACTTCCTCAAAGAAAAGGTTATCATTTGATGTTTTTTTTAT TACTTCAAAAACCTGCACCCCTTCTTCTTTATGATGAGTACAAAGCCTAT TATTTAAATTGTAGCTTTTTAAATAAATAGTTTTTTTGTGCTCTTGTCGT GAGTAAGAAATGCCCACAAACATAAGTAGGTCTTGTAGGATGGAGAGTCT GTTCTATCTTGCTCAAGTCTTCAACGTAAGCGATCGTAAAACTTTATTAT TGTCATATTTCAGCATATTTTCATAACAGTTTTTATGAAACTCAGTCAAA CCTCTTTTTTTTCATTTAGAAAAACAGACAATATTCTTAGATCCTTTCGT CTTGGAGCAACTACAATCTGGGAATTTCCTTTCCCGAAAAACATCTATCG AATTGCAGAATATCTCCATTTATGTTTTGACCAAAGACCATGAGAAAAAG CAGAAGTCAAAGAAACACCTGGTATGTATTAAACTTGAGCATGGCGTTCT AAATCTATGTTGCTCCAAACCATCCAGGCCTGTAGATTTAGAACGCCATG AATTGGAGAGAATTTAGGAAGTCGATTTATTCTGTGCTACATACAAGGAC TTCAATAAGAATATTCTCCGACGTTACGGTTTAGCATCGCTTCAGTATGA TGTTCGTTATTGATAGGAACTGTTCGTTTTGGTTTCGTAAACGTTTCAGG GCAAGAAAGGAGCAGTTCCGTTCCGATGATAATAGTTGAATGTCATTATT TCGATCCGCTTTCCTTTGTAACGTCTTCTTTTTTGACGTTTCGCAATCTT TGGGTGTCCACACAGTGTTTCGGAACCGTTTCAGATATTCACCCTGTTGT TTTCTTTATTTTCAGGATGAGAGGGAATCAATTTGTTTTGAACTTTCCAA ATGTTCATTTGTCAACACAGAGCCAATGTACACTTTGGAATTGAGGACAC TATTAGAGAAAGGGAAAATCTTGAAATTGATGCAATCAAGCAGTTTTGAT ACTAACATTTATGTAGAGGTCAGAATCTTTTTTATCCTTTTATTTAAAAA AACACTTTGATTCCACTTTGATTTTTGTGACGTCGAAAAATCAAATATTT GAACTGTGCACATTCGAAAAAGTCGCAAAGTGGAATAATAATAACAATAA TAATAACGATATATTTGACAGTATCTCCAAAGTTTTACAATTGGCTCTTC ACCTGGAAATTGAGTATGATAAATATATATGTAGCGTATAAAAAATATGA TGTTCATTAAAAATACTGAGACCGGTTGTTACTAGAGACTAGAAGGCTAA AAGTTGGTAAAGCCAAGTACGTTCGATCAAATACCGTTGTAGAGTAATAT GAGCTTGGCAAAAGTAGACTAAGTGAACGTAGTGGTTAGTGCAAGACCGG TGTAAAACCAAAGTTTGAATTTAGATTAAGCATAGAATACTACAAAATTG ATACAACTATTGATAACAACTAATAGAACTAATTCCTCCATGGACAGTGA AATAAAGTACGACCAGACCAGGACGCTAGGTAGGCTGTTAGATCTAGGAA ATTAGTAGAGTAAATACGATTGATGAGGTGTGTAAGAGTAACACAAGAGT ATGACTTGGAATTGTCCAGGAGTAGTGAATATATAAAATATCATTAGAAT AACTCAAGACTAATTAAAATCAAATAATTAAACAAATAGGGGATAGTTGC TCTAAAGAATAATGACCGGAGTGTATCTACTGCTACTGGCTACGGAATAG GGATAAGTTAATCAATACGATGGAAAATGACTAAGAGATACAAGGCGTTA AAGGATTTGGAGTTAGATGTGGCAACGTCCCAGCTCAAAACGATAAGCAA TATAAAAAAAAATACTAAATAATGAAATATTTATTAAAAGTGAGAAAGTA TGTTGTTATATAGTTGACGATCGTAAAGAATAGCAGAGTTGGTTATCACA AGGTTAAAACTCTCGCAAGTCTAATATTAAGTTATCAACAGGATAGTTAT TGTTAAATTGGAATCAAGTCATGAGCAGAGTAAAATCCCAAGGAAATAGC TGGACTTTGAGATTCAAGACATGAAAATACTTTAAATTCATACAAGGCTC CTAGCGAGACCTTGATCCAAGAAATGCCTTTTAGTTTCACTACAAAATAT ATTATAATCTAATTCATCCCGACATTTTTGGGGAAGTCCATTGAATATAC GCGAAGAGTCGTATTCAAAACTACCCATGATAATATTCGGACGAGCCAAC ATTGTGCCAGCGCGAACAGGGTTTCTCAAACCTTCTCGAGGTGTCATTTT TTCCGTCGGAAGGAAAGTTGGCCAGTTATTAGAGTTAATGGATTTCCATG CAAGTTTAGCCATGCTAAATTCTGCTCTCTCGCGTATTGGTAGCCATTTC AGCGAGATCACGTCTGATACGTTTGAGTAGCGGCTTCTCACGAAACTGGC GGTTGCGTTTTGTATCCGCTGCATCTGCTGGATGAGGTAGGATGGTGTGT TAATGAAAAGAGCATTGCCGTAGTCAAGCTGGCTCAATACAAGCGATTCT GCAAGCTGCTCCCGTAGATGGTAAGGTAGGTAGCGCTTGATACGACAAAG TGACTTGAGTGTACCATATGCTTTAGACGTAGCTTTTTTTATATGAGCGT TCCATTTCATATCCTCACTAAACGTTATACCGAGGAGTTTGAATGTTTTG ACACGTTCGATGGTTTTTTCGTCAAGCGATTTTATCTCGTATTCAAACTG GTGTCGTCTGGCCATTTGTTGTGTCGAAAATAGCACGGTTTTCGTCTTTT TCGAATTAAATAGAAGATTCTGGGTTTTCGACCATCTCTGGAGATCTTTG ATGTCGTTGTCGATTTTTTCAATGCACTCTACGAGGTGTTGGGGTCTTGT ATCGTCTGCATATTGCATACACTCCGCATCAGTATTTTTTGACATGTCAT GAACGTAGATATTAAATAGGACAGGGCCGAGGATACTTCCTTGGGGAACA CCATTTAGTACGGTTAGTCTGTTCGATTCCTTGTCATTGATCTGTACGAA TTGTAGACGGTTTGATAGGTAACTTGCCATTAGTAGCAATGCAGACTTTG AAAAGTTAAGTTTGTGAAGCTTTTCAATCATTATTTCGAAATCGACTGTG TCAAATGCTTTCGAGAAATCAGCCATCACAGAAAGAGTGACTTCACCACT ATCCATCGCCTTGATGATATCACTCTTGATTTTCATACATGTTGTGATCG TACAGTGTCCTTTTCGAAATCCAGATTGGTGGTTGGATAGAAGTTTACGG GATTCGATGTGATCGACCATTTGAAGCATTAGAATTCTTTCGTATACTTT TGAAAAGATTGGGAGAATGGATATTGGTCGGTAATCTGACGGTTCACTTG GTTCATCGACTTTCGGAATAGGCGTGATCTTCGAGATTTTCCATTGGTTA GGAAAAACGTTCTCCTCGATTGCAGTGTTTTTTATGTGACAAATTGGACT GGTGATTTCGTTAATACAAAGTTTTAAGAATTTCGAAGGTATCTTATCTT GTCCGGTGGAGCAATCATTACGGAGTGAGAGGATTGCTTTTCTTACGCCC GAGTAGGTGGTTTTAGAGAAGCTGAATGTGTTCTGATTATCAGGAAGTGT ATCAATCAAGTTTCGCAATATGGAATAGACAATAATGCGTGGAAAAAATG CCGTGGCGTCTAGTATGGACTTATTTGAGCATTGTTTTTGTGAAATACTC CTGAATACTCAGATAATTTACTTTAAATACGAAATATAAAAATCAACAAA CTACTTTACGTATTGGAATGGAATTTTCACTTTGATAGTACTGCCTTGGG TTATCAAAAACATTACATGTCCTCTCTTTTTTTGTCGAAGGAATCAAGTC ACTCTTTTTCTTCTATTCTATAGGCTACAGGTTTACAAAGTGGTATAAGC GTCATCAACCTCGATTCTTTTGATGCTTCCACTATACCAATGCTTCAGCC GTTCAATTTTCAACTGCAGTGTACTTTATCTTTGCTGCAAGAAAATAGGT TTGTGTTTTTTTAATATTGAATATGGCATAGTTTTAATCCGTCAGTATTA ATAATTTCTATCCTGGCTAAGTTTGTCACTTGGATGTTTTCTTTTACTTT GGGTGCTTTATTGATTAGCTAAGTAATAAAACTGATAGCGTATAGGTTAG ATATAAAATTCATAATACTGTAGGCCTTCTCATAAACATTTCCAAGGTGA TTAAATCCCTTGAGTCTTCAAGTGACATTTTTATAAATAGAGTAAACTTC TTATGAATTCCTCTGGGAATCAATTACCATAGCAACACTTTGAAAACTAG GTAAGCGTTGCTCGTGACTCAATTTACGAAAAAAGCTATTTGCACCAGAT CTTTAATGACAAACTATCCATCTTTTTCTCAGGGAAGTGCAACTGGCAAC AATGCGTTCACAAATTGCCATCAACACAGATGAAATAGAGCTGTTGTTTA CCAAACTTCAAATGTTACTTTATCAAAATGTTGCGCTCTCTTGGTTAAAT GGAAATGCAAATTCGGTTGTTGACGTCTTGACAAACAACATTTTCAACAC AAAACGTAATCCATTATTTTGACTTATTTCTACTTAGTTATGACCATTTA AATTCAAAAATCTCTTCTCAAAAAGTGCACAAATACGTCAAAAAAGGGTG ATTTGTCATGTCTTGGCAGCAGGTTTTAGGGGCCCCTAAGAATTCAGGTG ACCCCTAAGATTTAGGTAACTCCTGGTTGCCAAATATTTTAGGTGACCCC TAAACCAATGGCACGTCAAATTTTTTCGAAATCCTTTCAAACAATCAAAC AAATACAGCAGTTAGTTTAGCTTATTGCTAAATAGAATAAATGCCCTAAG AAATAAGAGATAAACTAAGTAATGAAGGTTCATGCCAGATTATCAAGGTT TTGTAAGTCAGGGTGCAAATCCCTTGCCAGACAGATTGTTTATCTAAGTA AATGCAACAGGATTAAAGAATTTTTTATAGATCAGTGTCGTAGGAAGCAT TTTTATATTAGGGAGGCTGAAGTTTAGTGACACCGCAAGGGCCAACCATG GTTTGGCCCAAGGGGAAAAATTTTGAAAATTTGAGCTCTAGATTGCTTGA AAATGCACTCAAAACATGCACTTTTAAGACAATTATGACAAATTAAAAAA GAAAAACTTTGCATCCAGCCGTGTTTGTTCGATTTGATTATCTCTTTCTT CCTTGTCTTTTGTTTCAATCAAACGGACACGCATTTTTACGATGTAATTA ACTTTTCTATTGAGTATTAAAAGATACCGGTAAGAATTTGCAAGTAAAAT TACTTTAGGCGTACAAACTTTCGCGAGCAGAAACTTTCGCGATTTTCGCG ATTATGCTCGCGAAAAATCCTTGACAAAATAGAAAATCTGTAAAACTTCA AACTTTGAATAAAATATAACTTTTATGGCACTTTTTAGCCTGTTAAAAGA CTAATAAGTATCAAAGGACAAATGTTTCAAGCCAATCCAAGAAGTATTTG TCCCTCAAAGCCATTTTTTCATGTGAAAAATTCTCAATTTTACGTCTCGA TTCGCAAAAGTTTATGCTCGCAAAAAGTATTTTTCCGTTAAATTCGCGAA AGTAAATGTCGTGAATTTCGCGATTTTTCGTCCTCGCGAAAATTTCTGCT CGCGAAAGTTTGTACGCCTAAAGTAACAATTAACTTTATGGAAAAGAAAT AATATTGGAATATACCAGCATATCTAAACCGGGTGGGCGTGCGGGTTGAA CTCTCATTTTACTGATATATGACACATTAATAAAAAAAGCGGTACTTTAT ACAGTCGGTCTCTCGACAGATCCACTTTGTTAGCGATGATAAATTCATTT GATCTTACGAGGCGCTGATGACTGTATCCTTTTCCTTACATTTCAGCAAC TGATTCAAGTTTGATGCGAGTGAAACTCCTTCATCTATCGGCAAACCTCG TTGACTTGACCAGCCTGTATTGTATGGATGTTTGTC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00072211TCONS_00072211Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00072211-proteinTCONS_00072211-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_71supercontigscaffold_71:1117185..1125670 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.27 0.29 0.39 0.28 2.94 2.3 1.84 2.84 0.48 0.86 0.94 0.81 0.62 0.7 0.22 0.62 0.49 0.45 0.51 0.8 0.66 0.57 0.17 0.62 2.67 2.84 0.16 0.31 0.76 0.64