XLOC_044756 (gene) - C. hemisphaerica

Overview
NameXLOC_044756
Unique NameXLOC_044756
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_70:136975..147471+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_044756 ID=XLOC_044756|Name=XLOC_044756|organism=Clytia hemisphaerica|type=gene|length=10497bp|location=Sequence derived from alignment at scaffold_70:136975..147471+ (Clytia hemisphaerica)
AACAATAATGTGAATTATACTGGAATCATGTCTCCTAGAAAGAGAGGTAT
TTTTTAATTATGTTTACATTAAATGCAATTTAAATTGTTGTTTCTTTTTA
TGTCACAAagtctatttttttatttgaaaatagtgTAATTTGGTAATACT
GACAATGACATCAAGTTTCAACTTCTAGTTGATATTTTTACCTTATCATT
TAAGTTTATTATTGAAATCAATACATAGCAAATTCCAAACTGttagaaaa
tatagaaaatatatttcacatatattttcatattgtctatattttacaga
ttttcaaagGGTGGTCCATGATATCAAGGAATTTCTTACAAAGCTTCAAG
GAGTAGAGACAGCGGAACTGCGAGACTCATTGAATTACAGTCTACTTAAT
CTCCATAAACATTATAAACGGATTCGCCACAAAACTAAGGTTTGTTTATA
TATTCTATCTCTCCCATATGTTTGATTCCATGATGTTCCGTAAACTTTTC
AAATACAGAGTTCTTCACTTTTCCGTTTGTCCCTTGTTGGGTATATAGCT
GCTGTTGATGAAAAGGTTCCATTCCAATGGGGACAAGGCTTGAAAttaat
ggaatttttttaatcctATGGATTACATGTAATATTTGAGAATCCTAGGG
GTTGAagtattttcattcaaaaaaaatggATCCCCGCCAGGGATTGCCCA
ATTACATATGGGCACAATtttctgaaacatttttcaaccaaaaacctTAA
TTATAAGGTCTAGGCCCAAAACCACCCTCAGTTCAATCAAAGCACTCACT
ACCTTAATCACAATACAATTCTTTTTTAAGCGATTTCTGAATTTAatgtt
tgattaattttaaaattcttttgaaagctgtgttaaatttttaaattaaa
ttgccCCTTGGTTTATCAAGTTCTTTCATTATGAAGTTGCAAAACTTCAG
TCGTTGATAATCTTGATTACTTAGATGTCGaacacatcaaaataaagata
ctAAAAAACAGTGATAGCCGAGTGCCTCAAACCAGGGGTCCGTGTTGTTT
TTTCCATTCAGTTCATGGTAGGCGAGCTGGGCTGGTCGTGGACCTCATGA
AAACACTTGAAATAATGTGTAGAGTTTCTAAATTACTAGGTTAATTATGT
GAAATATTGACTCTACTACTGCTTACTATTCTCTCATGTACTCTTTAATC
AATGTTCTTAACAGGTGACCCCTTTGCTTGATGGAAGTCTCTCTCTGTCC
AGTTCCCTTGGATCATTGAGCCCGGCATCTCCCTTCATCCCACCTGCAAA
CAAATTTGAATGGAGATGGATCAACTTAGATGCAAACCAGCTCAGTGCAA
GCTTTGGACACGGTGATAAAAGGAATTTACTTCCAGAGGTTTTTCACGTT
CTCAAGGAGGCTGATGTGGTCAGGTTGCAAGAGTTGATCAAATTaggttt
gtgttttttttttgtagatatttcaattttccttttactttaaatttcat
tttaaaatgttaTGAGAATTTTGACAAATTAAAAGTAATGATTTTGAACA
AAAGTAATTTCCCAGGGGCGCTACTTAGACAAAATTGGGTACGCGTCCTT
TTTtaaggctctgaagatatctgacagggtcaaaaatatttactaatttt
caagacgtgtttctgacagggtcgacttttggtaatttttgaccattttc
ataGTGGAAattagaattatttttcaatttttcgtctacttttattcatt
ttggccacttttcagggtggaaatagGAAAACTTTTCGATTTTTCTTTCT
GACAGGGTCAGATCATCATCAATGTCTTGAATAAATCGGTGGAATAGATG
CTCCTCATAAATTCGAACCCCTGTTTGTTCGAAGTATTGTGAATGTTGTT
CACTCTTGAAACTTCAAATAGCCGGAGGTCTACTGgactttcaattttca
ataagtaAAAATAGAATGTCTAAACAATCTTATGCTAAACAAAAGCTTTG
GCGCCAAAAAACTATAATAGAAGAAAGAGTTAATACCTAAACTGCCAaga
aagacattttttaaatagttcACTTACATTGTAATATTGTGATaacaaca
taaaaatcaaaagtccaaaaatcaCGACAATAAAATCCAAATGTTTCCAA
AATAAAGATGCTCttctcaaaaaaaatctaaattttttcaaatgagaATC
CATGGCAATTTTTATATGCAGACaaataaacaagcaaacaagtaaatttt
ctttaaatcttcTAATTCCAAAGTCCCCGAActgtttaaaatctttttaa
aatataaaagaaatttgaagtcCACTCTTTATCAGAGTCTCTCTTTAAAA
GCCTCATTATcgctcgaatctgattggtttataAAATTGTACAGTTTTCC
TAATTGTACGATTCAGAGAAAATAATTATTTGGCAACAATTTTTCGAAGT
TTTCAAATCACGAATCATTTTGGCCTACGAATGGAGGAAATGACATATTT
CCGCGTTACACttcctttataagaacatatcaacaatttttgaaaccttc
ggctgtttttggatttttttggtTATAAGCTTAATGATgttcctaaaatg
ttcttattcttTGTTCGTATTCTTTGTTCTTATTCTTtgcattttcagat
tttcctcATAAGTTGCACGTTTTacagccttaaaatgtttttttagattt
ttcttaaattctaTGGTATTGAAGTCTTAAATTCTATTTACaaactttgt
tcttataaaaaaacttgtacagTACAAAGTAAATTTCTTAGAATTAATTA
ACTCAAGTTTTTACAAGAAGAACAAACGAGaggaagaaaacaataaaaaa
tctgaACCTGAAGAAAACTACTTACCTTAAAATAAATCACCCAACGGTTT
TAATTaatcaaagtttcaaaaaacaacaactcTAAGTTTTCCACTGGACC
ttgctgttttttttatatatcgcatgtatattttcattttttttatagtt
ATTTGATTTGTCTACAGTGAAGCATAATGTACTCACGTTGACACTGAaag
attttgtaaatctttttttgacaatATTGATTAAAATAAGCgtactcatt
ttttttaattctttcaaaGAGATGTCGAGTCTGGTTGAATCAGTTATAAA
ACAGATTTGATTGATAATATTTATTTAACGAAAGGTCATTTTTTGAACGA
ACAACCGAATACGCGTTTTTTTatgaacatccaacatttttgaagcttcc
ggatgttcttaacattttgagttttaaggcttagattgttctttaaaaaa
aagaactttataacaagtttaagaacatttaaggcttttAGGCTCTAAAA
GACCCAATTTCTCAGGAAatcatggcccccggcgtgcgcatcgaattgag
ggggccaaaaaaatatgtcgcccaccatggttgggcgacgaagaaaattt
tcgactttttgcNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNTTCGACTTTTtgcccttatttcacccctctaaacggtat
atataagatttttcaaagtaaaaaaaaaaatactttgcaaaatattgggg
ggccatggcccccctggcccccccggtgacgggggccatggaaattgcac
aaaaataagaacatcggaagaacatctttaggcttaaaCAATCTGGGATG
CTCATACAAAAAAGTATATTGCTTAGAAAATTTAGCGAATCAAAATTGAG
CGAAAATCCGAAACCTTTAAACCTTTAAACAGCACtcattttttaagcct
ttgggGAAGTTACTTGCttggaaattttcaacaaattgATGTATGAATGA
CTCGATATGTTTAATAACTTTCATGAGCTGAAGATGaagtcttcttcttc
ttttcagaCAGTGATTGTATTAACGAGGTTGACGTGTTGGGACGTTGCAC
GGTTTCTTATTGTATCCATGGCAACACTAAGGAACATTTACAATGTCTCG
ATATCCTGATTCAAAATGGCGTCGATCTTCAACACGAGGCTAACGGTAAG
ATGCTCTCAATCGTTGTCTTATTCTAaaacacctccttctcacagaaccC
GGTAGGatcttttcagccagtgggggagGGGGTGGTCAAAATAGCGGACT
GAAACACGATGGGGATTGATtcttccatattttttatggcttgggattta
aatttttttgttttcaagtcagaaaactcaatggggatgggaaaaatagc
ataatattttgcattgtggattggtttatttgagtTGGGACAAAACTTGG
AGgatgattttccaccggggacgatattttagcAAACTctttcagtggga
aggggtcccagttagtctgtgagaagggagtgttcTAAAATAAAGTAATC
AAGTACAATTTTGCTAACTTTTTCTTGGGCGAATCTCTGGGgatatttgt
ttcattttttcattctgCTGTGGCAGGAACGATGAAATTAGCGATGAAAT
GAGGAAATGATGATGAAATGAGGCTACAAACTTAGCTTGCTAATTGACGC
AAAATACACTGAATTTGAGCCAGTGTGGTCAACATGCTCTATAGTTACGT
TTAAGATGGGTGTGGCAAAATGGAGTAATGATGGTCAGTTTCCGAAACAA
TGCGTAcattaaaaggaagaaattttgacgggaagaaaatttggtggatt
ttgcagatttggtcaaaatccgccaaattaagttctcgccaaatttaatt
tttcaagttaaccgccAAATTAGATTCCCTCCGAAAAAACTTTcttccat
ccgccaaattaaattcccgtcaaaatttcttcctttaatgtatttCTAAT
TTTCACATTTTATATAAAACAGACGGACTACGACCAATTCATATGTGTGC
TCTTTGTAATAACGAAAAAGCGTTGGAAAGACTCATGAAGAAAAAGGTAC
ACACttcttaaaattattttcagtttatttttaTAGGAGATTTCTGGGTA
CTTCACCTTTAATTAATCATTAATTCTGGCTCACTAATTTTATTGAATTA
TTCATTCTAATTAGCTAGTTGTGAAATTCGTTGAACCATTTGATGGGAAA
CAATGGTTTCTCTGATTTCTGGCTGGAAACTTTACAGTGAATTCTCACTT
TCTGAAAGTTTCAACAATTAATGATTTTCCCCATAGCACAGTCAATTAGT
TAGTTTCGAAATTCTTTGAACTAATAATTGACACCAATCAACTCCAAAAC
TCTTTGCAAAACTTTTTTAGAGATTTCTTGGTAAAATAAtatgcttcaaa
ttagttcATAAGTCATAACCAAacattgtacacgtttttttataagaaca
gctaacagtttttgaagccttcggatgttcttaactttttgagttttaag
cctaaaaatgttcttaacatgttcttattttgaccattttgtgagtattc
ttatccattttcctaagaaattcttAAGTCtaccaagccttaaaatgttc
tttaacttgttcttgacattttggccatcgaattTTTTACGTGTAATTgt
taaatctttctttaatgtGTCTACTTTACTAATGATAAGATTTGCAATTT
GTGAAACATTCTTTGAACTATTAATTTTCCCAATCCAGCTACAACACACA
TCGGTGTTTCGTCATTCATTTCAACGCCGTATATGTCTTAATGATAATGT
GTACCAGATGGAAACCATTCTTTTCTTCAGGTCTCTTTGAACGTAGAAGA
CAGCGAAGGACGGTTTCCACTTCATCTTGCAGCTGCTTATTCCGATAAAG
CACTTGTTAAGGTATTATATAGAAACCTCTCGATGATACAGTGAATTTTG
TTACCATTTTGTGCTTGAGATTATTTGGTGCAGAGCCTGGTGTTATGTTT
GTGGTTTTTCTGGTAACGAGAAGTATAATAAGATTTAAGGGCTAGATGCt
gtgctttaagccatcacaggcaaaaaaaagttaatatcgtaaaaaaatac
tgttgctattattgttttcgaaaacccgcgaagcttctgattggttaagc
gctgaaattctattgtaatgcagtgccgtagcaactggggggctatgccc
ccccaataattttttcaaaaatggttattttgcaaaatgcaaagtttttc
ttttttaatttgtcacaattgtctttatgtgcatgctttgagtgtatttt
taagcaatctagagctcaaattttcaaaattttcctctCGGGCCAaccca
tggttggccctcgcggtatcactaaacttcagaccccctaatatgaaaat
gcttcctacggcactgtaatGTCGCGTGACCTAGTTAGGATTTCCAACCT
AACCacagcacacttttcagccaaagcacgacgtATCTAAGCCCTTCAAC
GTACAAAATCAACGAAATAAAAGCGAAAATGATTTCTTTTGACTAGCTTA
TAATGTTTTTCCGTTAAAATATAATTCTAATTGTTAGCTTGCGTAGAAAC
TGTTAGACGCAGTGATATGGTTTTtgtatgataatacgataattgttatG
TGGTATTGTTAGTTTATATGAACTAGAATTTTTCCCTTgcattatttcta
tatttttttctaCTATATCTGAGTTAGACTATGCTTTCTACGAATAATAT
CTCTGATTTGTTCATAGAAACTGTTAGACGCAGGAGGCGATAAGAATAGC
CTGGACAACGATGAGATGACACCAGTTATGTGGGCTTGCCATTTCGATCA
ATACGAAAACATGGAATTGTTGTTGAATATCTCCCATGATGATGATATGA
GGTAAAGTTcagaccactgacctttatatatccctggaccaagctatatc
cgccatctttgatcgaagtttttttttgaattggtatccgtaaagaagcc
attgcagtgttaaaaattaacatctaacggcgctacatcatcaaaagttt
tcgaggaaAAGCAGATCTatcgctctcgatgcatttacaccgctattaaG
TAGTgccaccattagggtaccacttttcaaaaaaaaactccgatcaaaaa
ttttgcttagccgggattgaaaaacttatccagggtatataaaggtcagt
ggttcaGACACACCTCGATCTCAAGGCAAACATCGTCGACGTTcttatag
gccatttcacattCGAAATGAAActtgggtaatcaggactgcatagtttg
cacccccccctttttaatagggggggatgccaactttctggagggccttt
gtagggggggtaccgagatctgccgaaaaaactaggggggNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgggggg
ataagatttcattacaaaagggggggatgggtatatagggggggatgaaa
taaacctaggggggttcatacccctctgcaaactatgggactgattgcgc
ctccataacggtttcccgttggctagacgcaaaaatcttcaaaaattttt
aaaactttggaccaatagtaagtcgtcattagcgcgcagtggtcttgatt
acccattacgctttgcgactgtgaaatggcctatttgAACGTTACATGAT
GAGTTTTCCAGAGGCTCACAGGGCTAATCTCCTCATCAATCAAAAAAAGG
GTAAACATGAGGGCGTGGTTGGttcaaacatttgttttgaaatatccctg
ttttttgtgttttttaaaagattttaaacaaccatcaatttaatttttgc
tgAGCAAGACCATGCAAAGTTTCCTAATCATTTTTTCTCACTCGATGTTA
tagaaattttctatttttgaggGAGGATAGATAAAAAGAATTTCCCTCCC
ATCGCCAGATAAGAATGGTGATTGGATTCTTCGATTACTGTATTTGGGTg
gtaagggggggggggctcttacCCCAATAAATTTCTCAAGGACAAGTCTT
AACTTATTTTGTCATTCAAAGACTCGTTTATGTGCTGTTTTCTAGTCAAT
TGTTACTTTtcggacctacctggaggtcctataaattaacctttgtcctt
tcgtccgtccgtccgtccgtccgtctgttaccagcttttcttagGATTGG
GTCaccagttttttctgatttttggtaaaatggtaATGCTCAAAATTtaa
cggagcccaattttcgaaaaaaattcatttccggccgaaaatgccggaaa
tatgccgtaaaaacggttttttggtattttcgcgagatttcatcattagt
tttttctgattttttgcacgaagaTGCATATTagcaatacccaaaatgtg
gtctagttggatttttgagaaaatatttttgtcacgaaattttgcacact
ggtgCAATTGGCAATACCTAAGATATACATAaggtattttcgaaaaaatg
tctTCCCGGCCGCTGGGccaaaaatgccagaaatatgccggaaaaaccag
tttttacaattttctcaagattccatcattagttttttctgatatgTGTT
ACGATGTAATGTATTCATGTAACTTTACAATCTGATAATGTTTTTTCGGT
CTGTATTTTGTTGACCTGCGATCTGTGACTTACAACCTGTgtcctgtgac
ctgcgtttcgaactaacCGACCGACAAGAAGTGAGTCTATCTATCCCTCG
TGTCTTTTCCTATGTATATATTCCAGGTTTGAGATAATTGATGCAGAGAT
GCGAGACAAAGACAAATCGGGAAAGAACCTTTTGCATTGGAGTTGTTCGC
AAAGCACCAGTAAACAATGTTTTAAGGTGAGCAATCTTTTAGAAAAACGA
TATGCTTATGAAGTCTCGTTAATTTATCTAGCAGTTTTTTTCTACCCACA
CTTTCCATCCTTGTCAGCCTGAACCTGGGGGggatgggtgctgggtatgt
gtggacggtaagggtcggttttttcacctttcaaagtctctctaagggtc
ggaaaaatcagacagttttaaattagtccctctaagggtaggattttttt
ctaaaatggaagaaaaactttcaaaaaagtccctctatgtctctctaagg
gtcgcaggcaaaattccaagcactcTGGTCACTGGCCGTTTTTTGactta
gaaattgagttttggcCTTCGAAAGTAACCaaaattttttataaggattA
AGCATTGTATTTGCGAAAATAGAAAGAAGtgtattgaattgaatttattC
TCAATCATCATAGAGAGAATACATTTTGATTTTGCTCACTATCTTCATCT
TTTTGACAGTTTTGTACACAAAATACAAATTctctaaatattcaaaattt
tggcCGTATAGCGGCCAcaaaaaagtgcttggaattttcactgGGTCGGT
TTTTGGTCCGtctgcacatacccctcatccgtCAACCCTAGTATCTCTAT
CCCCTCCGGGGGCTCGAACataacccttcgagcatctttGGAAAAGGTGC
GctcaaaacataaacaaaacgtCTTGATATCAAAATACCTACTAATTGAT
ATGCTTTCGTTCAAGGTGTTGATGAGAAGCGAGTACACGAACATCGTCGA
TAACCATGGCAAAACCATCCTTCATCAAATCGCTGAAAATGGTGAGT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00072062TCONS_00072062Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00072062-proteinTCONS_00072062-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_70supercontigscaffold_70:136975..147471 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.6	3.34	1.28	1.39	11.23	9.38	11.32	13.62	10.31	11.73	6.5	9.27	9.55	10.24	4.97	6.4	6.41	7.41	11.34	8.2	7.51	7.98	5.22	6.92	22.72	18.66	2.8	2.79	4.33	4.22