TCONS_00072062-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00072062-protein
Unique NameTCONS_00072062-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length342

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00072062-protein ID=TCONS_00072062-protein|Name=TCONS_00072062-protein|organism=Clytia hemisphaerica|type=polypeptide|length=342bp
NNNVNYTGIMSPRKRDFQRVVHDIKEFLTKLQGVETAELRDSLNYSLLNL
HKHYKRIRHKTKVTPLLDGSLSLSSSLGSLSPASPFIPPANKFEWRWINL
DANQLSASFGHGDKRNLLPEVFHVLKEADVVRLQELIKLDSDCINEVDVL
GRCTVSYCIHGNTKEHLQCLDILIQNGVDLQHEANDGLRPIHMCALCNNE
KALERLMKKKVSLNVEDSEGRFPLHLAAAYSDKALVKKLLDAGGDKNSLD
NDEMTPVMWACHFDQYENMELLLNISHDDDMRFEIIDAEMRDKDKSGKNL
LHWSCSQSTSKQCFKVLMRSEYTNIVDNHGKTILHQIAENGE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_044756XLOC_044756Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00072062TCONS_00072062Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 219..248
e-value: 0.068
score: 22.3
coord: 252..281
e-value: 22.0
score: 14.0
coord: 186..215
e-value: 2.0
score: 17.4
coord: 296..327
e-value: 590.0
score: 6.7
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 186..218
score: 8.576
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 219..251
score: 12.689
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 216..342
e-value: 2.2E-23
score: 82.0
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 119..215
e-value: 2.9E-15
score: 55.7
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 191..274
e-value: 9.9E-12
score: 45.2
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 166..342
score: 31.033
IPR020683Ankyrin repeat-containing domainSUPERFAMILY48403Ankyrin repeatcoord: 133..340
NoneNo IPR availableCDDcd00204ANKcoord: 157..273
e-value: 1.09318E-21
score: 87.439

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00072062-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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