XLOC_044384 (gene) - C. hemisphaerica

Overview
NameXLOC_044384
Unique NameXLOC_044384
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_60:1700040..1704098-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_044384 ID=XLOC_044384|Name=XLOC_044384|organism=Clytia hemisphaerica|type=gene|length=4059bp|location=Sequence derived from alignment at scaffold_60:1700040..1704098- (Clytia hemisphaerica)
AAAAACAATGAAACGCAAAAAGTATAAGTACCCATCAAATTTTGTCAATT
GGTCATTCAAAAGCAACCTTGGGGAAAAAGTGAACCAATACAGAGCACTG
AAGAACAAAGGAACTAACTTGACTTTTTAAGGTAAGTAAATTGAAACTGT
TTATATTGAACTATTTTGGATAAGCCGAAACCTACTAAACATTTTACAGT
AGAGTCTCTTTAACTCGAACATCTTAACTCGAATGTTTATCATAAACTCG
AACAAGTTTTCTCGCCCCTTTTGTTAACAATGCGTTATAAACCTTATTTC
ATAACTAAAACTTTCCTTGACTCGAATAAATATGTGAACCACGTGAGTGT
TCGAGTTACGGAGACTCAACATATACATAGTGTCCTCCAGGGTTTGTTCC
CCCCACCAAATTCTTGATTTTTTTAAATCTCCCCCCTCTTTTTTTCCCCC
TATGACTTTTCAGTTTTTTAGTTCNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
ACTATCGATGTTTTCCCCCTCTTTTTTTCCCCCCTTTACTATTCAAATTT
TCATTTCCCCCCCTCACCCATTCAAAACTGGAAAATTGATTCCCCCCCCC
TTTATAAAGGGGGGGGGAGGACACTATGATATATGAATTGACTCTTTCGG
AAAATTTTTCATTGATATTTCCTATTAATTCTAAAATTTACTCCTTTGGG
TGCTATTGATGCTAAAATTTTGAAGCCTGCTTTTTATTCTCATATGTACT
TGAAGAGGTTTGAACCAACCATCATACTTTTCCCCATTGTCTATGTCCCC
TGAGAGTTAATATTTTCTCTGTTTTATTCCACAGGAAGAAAATGAAGATC
AGTTTGTTGGTTTTAGTGCTGGCAACTCTTGTAGGTTAGTAAAATATCAA
TCTCTATTTAGCTTACACATTTTTTATGTGGCTAAAATTTCAAAGCTTTA
AAACAGGAGCAGCCCATATAAAGTTGTTGGACGGATTTTTCTAAACCATT
TATTGGGCTATTCCATAAAAAAATATTTGTACCCCCTATACCCTATGTTG
AGGAGGTCTTTTTTGGGAAAGGTTTTTTTAATTTTCAGGACCCCCTTGAA
TTTTTTTCCTCATTTCTGGACCACCCTGGATTTTCGACCTCGTTTTACTG
ACCACCCTGAATTTTTCACCCCATTTTACTGTATACCAGACCCCTTTGAA
TTTTTACTTTCCAGACAACCCTTGACAACACCTGTCACACCTTCGCAACA
TATTGAATAGACTATTTTCTGGAATAGCCCATCGGGATGGTAGTGTAATT
TGAAGTGGTGTTTGTTTTTAAAATAAGTGTGTTTCTATGAACAAAAAACT
GATTCATTTATTTTTCAGTTGCTGATCGAGCTTACCGAGATGATATTCGA
GAGTTGAAAAAACTCGATCAAAACATTTTATACGACATGTTGAAAGATAA
ACGATTATACGATCATGTTGATTTTGATGACGAGACGAAAAAATTTCTAA
CCAGCCATTCTAAAGGTAAGTCGTCAGTAATTAAACTATTTATGATTCTG
AGATCATGTTCAGACGTTACGGTTCCGTATCGCTCCGGTATGGTATTTGT
TACGGATAGAAAGTGTTCGTACTGATTTTAGAACGTTTCCAAGCAATGAA
ATGGAGGAGTTCCGTTCCGATGTAAAAAGTGAAGCGAAACCGTTTCGATC
TGTTGTGCCTGTACCGCCCTGCACAAGGGCGTTTTTCATGTCTTGAAAAA
ACTTGCCGCGTATCTTTAGCAATATAAACATTGAACCAAGCTATATCCGC
GATTTATGACCGGAGGTTTTTTTGAAATTGGTACCCGCAAAGAAGCCATT
CTTGTGTTAGAACTTTTCCTTAAGACAAACGGCGCTGCAGCACTAGTCTA
TGAAGTCTACAAGTAAAGGAAGAAGATCTAATAACTTCTAAATAACCTAA
ATAACTTCTTGAGTTCACAAAAAAGCTTCAACCGATGCAAAATAGAACAG
ATTTGCGCTGTCATTCGCCAAAATAAGTTCTCGCCAAAATTAAAAAGATC
GTTCTCTCGCCAAATTAAGTTCTCGACAAAATTTAAAAAAAAATTGAATC
GACCGTTCGTCAAAATTAGTTCTCGCCAAAAAAAGTTCCATTAAGGTATC
TAGCCCATCTTCTGTCGAAAAGTGGCGTATATCTATCCAGTCATTAATGA
AATATCATTTTTATTTTATTTTCAGACGAACTGCGAGATATAATGGATAT
GCTTTCAGCTGATGAAGATGAAGATGAAGACACTGGCGATGATAAAGAAC
TGGAGGAAGAAAAAGGTTAGAAATTGACCCCAACAAAATAATTTTAAGTA
CTTTAACTTTTTTGGTCATATTTTTTTGATGTTGCTTTTCTTTTACGCAA
TAAGCCTGGGAACCTGTTCTGGTCTGGTCTGTAAAATACACAAACAGGTG
GCATTTTTTTGGGTCCTAGATTTAAATCCATTTTTTACCCCTAAACTATA
ATCATGCAAAATCTCGTACTTTTACGCCTTTGTGCACATATTTTACTCAA
CTAGACCGTACTACTTCTCTAAGGTCCCGAATAAATGTCCCCATCCGGTT
ATTCATTTTCAAAATTAAAACATTTTTTCTATCCTATTTTTATAAAGGAT
TAGGAGACAAAGAAATGGAGACTAGACCCAAAAGAAAGGAAACCTTGGAT
GAAAACAAAAAGGATAATGACAATGATGAGGATTTAGATGAAGTTTTAGC
TGACGACGCTGACGATTTCGATGAAGAAGACGTACGACATTTACCTAAAG
AACAACGTGATCCATGGTGGCGTGGACGTCGCCGACGACGATTTTGGAGA
ACAATTGCCAAACCGTTCAAACACGTTGGCAATTTCGTCAAAAAACATCA
CAAAAAGATTGTGAAAGGTGTGGTAGCTGCAGCTAAGTTGTGTAGACAAA
CCAGATGTCACCGTATGATTAGAGGTAAAAAATAAAATGGGTTACAAATA
ATTCCAAACCCCTTCAGTACCCTGCTTGCTCATCATATCTCAATGACGGT
ATACAGGGTTTTTTATAAGAAAATTCAACCTTATTGGATGTTCTTAACTT
TTTTTATTTTTAAGCCTAAAAATATTCTTAATGCATCTTCTTATTTTCCC
CATTTCGTGAGCATTTTTGTCCATTTTCCTTAGAAATCGGATGTTTTCTC
AAAGTCCACAAAGCCTTAAAAATGTTCTTAACTTGTTCTTAACATTCTTG
CTATCGAAGCCTTATGTTCTTATATAGTTTATTCTTATATAAAAAAAATC
TCAATCAAAAGATCAAGCAACCCGTATTATTTAATTTTTATATGTGTAAT
TTTGAATATAAAATATAAGCTGTCAAAAGTCAAATAAGTCATAAAATTCT
GAAATCGACTTTCGTTTGATTATGCTTATGTGAATGATAGCTTATTTCTT
TGTGGGGAATACTTATAATCTTAAAAATTATTTTTTGATAAACTTTTGTA
TTTTTTACATTATTTACATTTTACTATTTTAGATAAAATGAATCTTTAAC
GGAAAACAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00071483TCONS_00071483Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00071483-proteinTCONS_00071483-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_60supercontigscaffold_60:1700040..1704098 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.01	2.72	2.8	3.96	0.6	0.88	0.57	0.53	0.69	0.56	0.38	0.55	8.27	18.08	0.74	0.58	1.4	1.1	1226.01	1280.89	0.49	0.67	12.05	7.22	20.86	14.25	17.66	11.25	0.88	1.25