XLOC_044267 (gene) - C. hemisphaerica

Overview
NameXLOC_044267
Unique NameXLOC_044267
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_60:2216..5045+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_044267 ID=XLOC_044267|Name=XLOC_044267|organism=Clytia hemisphaerica|type=gene|length=2830bp|location=Sequence derived from alignment at scaffold_60:2216..5045+ (Clytia hemisphaerica)
TTTTACCGAAAGTATtattaaaattgtttttctttttcttacagCTATAA TAAATAATATTTAAGTAAGAATCAGCCgtaaaattatccaaaaagGAGCA ATATGTCGTCTGACGAAGAAGATGGCCCACAactgaaaaaacaaagattg tTTTATGGTAGTTTAGAAGACCAGGAGAGGGAAAGGATATTACGTGAGGA GAAAGCAGCACAGGAATTGTTACGTGCACAGGGAAGTGAATCAAGCGAGG AGTCAAGTGACGATGAGgattcaaagaaaaagaaaaagaaacgaaAGAAG AAGAATCAAGGTTTGTTTTACTACCCCAAGCTAAATATTTGGGTTTATTA AGCTCTCCTTCTATTTTATAGGGGCATTATTCTTCCGGCTTGGAGACAAG TTTTGCAGGTCTAAAGAAGAAATTATCTGTGAATATCTTTTATTGGGTGC AGGGGCCTAATCATTGCAATCATAAAGTTTTCTTAGTGTTAGTTGGCCTA AATTTAGTATTATAGAGGtcgtttcatagaggtcaatagacctgagaaat acacttctataaattaaattaattaaagTATTTATTTTATTAGAGGCTTT CTGTTAACTTAGGTAAACATAGTAATAATTTTGGTCCGGTCAAATCACTA GAATCCGCAACAGTTTTCTTGCAGTGTTCATACAATTTGTTGGGAATTGT TTGATAATTTCTACCTGagcaaaacttccaaaaaacATCAAACCATCAGG TTTTAAACAGTTAGTTTTCTTTTCAGAATCTGACGGCGAATCTGATAGTG ATGAGGATACAGCAGTTGATCGAGCTATGAAAGCTGGTAATATCAACATT GGTGATGTTGAAACCATGGAAATGACTCCTGATGCCAAAGCTGAACACCA ACAAGAATTAATGGCACAATTTGAAAAGCGTAAAATAATCAAATCTATCA CCGTGTCTACTGATGATAAAGCTGTCAAGGCTCGATTACGTGAACTTGGC CATCCTATTTGTCTCTTTGGTGAAGGACCAGCTCAACGTCGCGATCGTTT AAGAGATTTGCTCTCAGTCTTTGAGCAGCTTTTACCAGGATTTACTGCAA CTAAGGAAGAATCTGAGGAAGAAGAAGAGGCAGATGCTCCTGAGGAAGTA TGGTACCATGAGGGGACCGAGGAGCTGAAAGCCTCACGGTTGTTTATGGC CAAGTACTCTGTCCCTAGGGCAAGAGATCGTTTGATACAAGCCAAAAAGG ACTTAAAAATGCCTGAAACAGAGAAACTGAAAAAGTCGCAAGAAGTGCAA AGAAAGATGAGAGCATTGATTAATTTTTGCAGTCAGATTGGTGATAATCG TCCTCTATCGTATTGTAATTTGTCACCTAACGGGAAGCTTCTGGCCACTG GATCTTGGAGTGGTTTATGTAAATTATGGTCGCTTCCTGATGGTAATGAA GTACGAACTCTGAAGGGTCATAACGAGAGAGTTGGTGCTATTGTCTTTCA CCCTCAATCCACAATAAGTTTGGAAAGCTCTGCTGCTAATATGGTATCTT GTGGTGTAGATGGTGTTGTTCAATTATGGAATCTAGAGGATGATGCTCCA ATCGGGAAAATCGAAGGCCACGAGGAGCGAGTTTCAAGCCTTGCTTTTCA TCCTTCTGGCAGGTTTCTAGGTACCTCGTGTTTTGATAAATCATGGCGTT TATGGGATTTGGAGCAACAGACTGAGGTTTTACATCAAGAGGGTCACGGT AAGGAAGTCTACAAGATTTGTTTCCAACAGGATGGTGCGTTGGCAGTCAC AGGTGGTTACGATGCTAGAGGACTGGTCTGGGATTTGCGTACTGGTCGTA ACGTGTTTTCACTTGACGGACATTTGAAAAGGGTTCTTGCCGTTGATTTT CACTCAAACGGCTATCAAGTTGCCACAGGAAGTGAGGACCAAAAATGTAT GATTTGGGATTTGAGACAACAAAAATCGATTTACACTATTCCAGCTCATA ATAATTTAATATCgcatttgaaattttgtaataaCTTTTTGGTGACAGCT TCTTTTGATGGTGAAGCGAAAGTCTGGTCATATCCTACATGGACACCATT GAAAACTTTATCAGGACATGAACAGAAAGTCACTTGTGTTGATGTTACTC AAGATGAGAATTTTATTGTAACAACTTCCTTTGATCGGACATTCAAATTA TGGGGACCTGAGTTTTTAGTgtaatattttataaatgtatGATGTTTTGG TCGTTTTAATACCGCGGCTATGTTATGACATAAGACTAAAGGACATGATG TAAAGAAATCTTCAACCTTGGCCTTTTTGTTTATTTGCTTACCTTTTTTG ACTTCATAATGTATTacatttttaactctttttttaAAATAGAACAGTTT TTTAACGGTCGACGCGAAAGATTTTAAATTGGAGATACTCTTTATTTACA ATTTTAGTCTTATCATATACGAGCTGCCAGTCAATCTTCATATCCAGTCT CGCATATATGAAAAGATGCGTTTTATCCCACTTGTCattcaaaaaaaaca atttgtcttttaaattcaaagaaattcCACCATTATTGAAGTTTATCCTG TTTAAAATGTTCACTCCAGTGTTTTGCTATTTTGTGGAAACCATTCCCAA ACCAAACTACTATAATAACCCTGACTTGGTTTTCACAATGTAGCCAAAAA CACTGCACAGTTAAAGCCAATTAagtttaaatgatttttttttcattcta gaTGTTGAAAATGATAATAATGATAAGATAACATTCATTACAATGTCTGA CATCCGTTGGTTTGATTCTAACAGTGACAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00071211TCONS_00071211Clytia hemisphaericatranscript
TCONS_00071212TCONS_00071212Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00071212-proteinTCONS_00071212-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_60supercontigscaffold_60:2216..5045 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
PRPF4U4/U6 small nuclear ribonucleoprotein Prp4 isoform 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
54.7 50.51 40.44 40.24 45.09 36.73 39.83 40.7 28.74 31.76 20.61 16.4 13.77 12.55 17.61 19.12 29.21 18.15 7.32 9.04 21.62 20 55.26 48.6 19.83 23.55 14.53 11.92 37.17 42.54