XLOC_044231 (gene) - C. hemisphaerica

Overview
NameXLOC_044231
Unique NameXLOC_044231
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_6:162993..167774-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_044231 ID=XLOC_044231|Name=XLOC_044231|organism=Clytia hemisphaerica|type=gene|length=4782bp|location=Sequence derived from alignment at scaffold_6:162993..167774- (Clytia hemisphaerica)
AGTAGGTATATGTTGACATTGCTTATTGATTGCTAAATTTATTCATCTTC ATTGATAGTGAAGTAAAGTAAAGAATGGATTTCTTTTGTTTTTAGATACT GAAGAATCCTTCACCACCTTGCCAGTAGTGGCAAAACAAAAAACTGGTAA GGATGTAACAACAACAAAGAAAAGTTTTGAAGGTAAGTAAGTTTAACAAG ACAAGTGCTTTATCAGTAAAGGCGACCATGAAAAATTACTCTCATCAAAA GTCCAACACCACTTTCTTTTGCTGTTTTTGAACTTCTGACTATGAGTTTG TTAGTAACGATTAAAAAATTACAGTCAGAATTTAAATCTGTTAAATTTAC TCATTCAGAGATTTCGATGCAAGTTGAGAATGAAAGCCCTTCCAAAGAAA AGAATGTTTCATCAAATGAACCAAAAAGTGCGACTCCAAAAAAGAATCTA ACAGGTTAATTATAATTCCTTCAAACCTAGAAAGATTAATAGTGAGCCTT GTTCTTCCATTTCAGATTGAGTCATATGTTTTGTGAAAGTTAGAAATAAC AAATTCTGTCTGAAATGGCAATGGCCTAAACTAAAGTTTGAAAGCGTCTA TTAAACAAAAATGAGATTTTCAACTCCGACACTATTATTATTATTATTAT CTACTCTCATAGTTGACCTTTTTCATAAATTACGTCACAAGCAACGCTTA CCTCCTTTTTAAAGTATTGCCATGGTAATTGATTCCCAGAGGAGTTTAAA AGCAGTTTACTCTATTTCAGTAACACTTGAAGACTATAATCATCTTTTTA ATGGCTTCAAAACGAGTCAGCTGTTGAACCAAGAACTCATGAAAAAGCCT AATAATCCGTTTACCTGTTTTTCACTCACCCTTTCTAATTGAAAACTAAC TTCATAACTCCATTTATAATAAAAGCAACACCACTTTATTTCAATTTTTC GTAGAGTTTATTTCAACTATTGGTCTTTCAAAAGTCACACAAGAAAATGT TCAAGAGAAAGCAGTTAAACGAAGCATGGAAACGCAAGCTGGTAGTGCAA AGGTGGTCAAGAAAAAACGGTCTAGGCTAAAAAATAACAACAAGGAACCC AATATACTGGAAGAAGGTGTATCAAATCGTTCAATGAGAACTCGATCGCG GTCAAACAAAACAATTGATATTTCGCTGGCAGCTTATTGTAGCATGATCA ATAAATCCATCAATCAGACAACGGATGTTGACCAGGATGATGCTGGTGTT GAAAAACATCCATCTCCCATATCAAAAGGTTTGTATATCAAGATTTTGAT ATAATGATGATGACTGGCTTCTCCTTACAGAGGATGCTAGATTCTATATT GAGCAGCCTAGGAGTCGTCTCGTTATTACTGTCTTACACTATAGTTTATA CTGCCTGCTCTGGCTCACTTTGATATCATGGTATGTCCTCTAGAAGCAGA ATCTGCGCACTTTTTGGTATTTACATGTCGACGAAACATAGATGGATTTA ACAGGCTAGGTATATAAAAGGCTATATATAATATTAGCAGTCATTGAAAG AGTGGCTGACACGGTGTATAAATTAATTTCAAAATCAAACAAAATTGCCA CTGAAATTTTGAAATTAACCTGTCAAATTAAGACTTCATTGACACAAAAA TTCATACACACCGCCAAGCATTTTCAGAACACTTTAACTGATGTCAATAT CTAATTGATTTTGTAGCTTCTGCAAAAACCAATAACACAAAGAAAAACAA TCAAAGCATTGTCAAGAGAAACAATAGGAAGAATATCAGCAAGAATTTAC AAGTCACCTTTAATGAAGAAAGTATCTGCAAACAAGTTTTTGTTCCTTCT GAACCATTAACCAAAAAAGGTTTGTTTAAGTCGTGGCTAAATTATTCAGT TCTGTCTAATAGCGATTCTTAGCCTTACCAAGTAAATTTCCTATTTAGAA AAATCATGTTGCAGCTTTTGTTTATGTCTTAGCTTAAGTTTTTTTACTCA AGGTTTTACATTGATTGATTGAAAATAATTAATGAAAGTTTTCTTTGGTA TTTTTAAAAGAGTTAAAAGTTGGGGACTGATGACGAGTGGACATTTTTAG TTGAATTCGATAATCATCTATTGGATTTATATATATAAATTTTACCAAAT ACTATTCCTAGTAATATAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAACCAA AATTTGGGAAAACAGTTACTCCACCAGTGGACTAACTGCAACATGGGTGG TGCCTTAACATGAAATTTGGAAAATCAGTTATTATTTTGTGGAGTAACTG TTAAAATTTTAGCTTATTTCTGCAAAGATTGTGAAAATTTTTCTTATAAA AAATAGAAATTTTTTTTTCTGTCCTAAAAACCTTAAAGATACTCATAGTT CCAGCTGATAGTTCTCCTTAATAATAAGTGTATCCAGCAGCAGGTGTATC TGAGTTTATTTTTCATAGTTTGTGTTCTCTATCTATTCCAAAACATTGTA TTTACACAGGTTTGTTCAGGTTTTTACCAATACTTCCATCAGGTGTTGTT TTCCTTTTCAATCAAAAACGGACAGATTTTTTTCAATCAATGTGAAGAGT TTTTAATTGAACTAACCATTGATTTGTACAGTTTTAATAAAGACATCTCA ACTATATTTATATTTAGAATTTTTGTTAGAAATTTAATTCAATGTTTTGA AAAGTACTGTATTGAAGTTCTCAAAGTTATATCGCTTGAGTAGGTTTGAA TGTTTTGGGAGTTGGGAAAATGTTAAAAGTAATTATTTATGAATTTGATT AATGGAGATTATATGTACCTTTGTTTTTTTTAGAAATAATTAGAAAGAAA CAGATATAAAATGGATAGAGTAGAAAATGCAACAGATAAAGATTTAGCAG TATCTGACAGTGACAAGGAGAATGAAGAGGAAGAAGAAATTGTTAATAAA TGCAGCTTTTGTGAAAAAACTTTTCATGGAGCTGGTCATAACAGAACTAA TTTTGAGCGTCATGTTGAGTCTNAAATTCATACGCACCAAGTTTTAGGAT TTTCAGCACGCTTTAATTGATGTGAATATCTACTTAATATTGTAGCTTCT GCAAAGACCAACAATGTCACTACCTTTAACAATCAAAGTATTGTCAAGAG AAACAATAGGAAGAATATCAGCAAGAATTTACAAATCATCTTTAATGAAG AAAGTATCTGCAAACAAGATTTTGTTCCTTCTGAACCATTAACCAAAAAA GGTTTGTTTAAGTCGTTTTCAAAATTATTTAGTTCTATCTAATAACCATT CTTAAGCCTTATCAAGTAAATTTTCTATTTAGAAAAAACAGGTATTTCAA TTGTTTTTTGGACCTACCCCGGAGGTCCTTTTAATTTTTCGTTCGTTCGT TCGTCCGTTCGTCCGTTCGTCTGTTCTCTGTTACCAGCTTTTCTCGGGAT TGGCTCATTAGTTATTTCAGATTTTTTGCACAGTGATGCAAAATGGTTAT TCCCAAAAAGCGACGGAGCCCGATTTTCGAAAAGATTTAGGCCAAAAAGT GCCTAAAAATGGGGTTTTTTGGACTTGGACTAATGTTGCTTGTTTGATCA AAAATTTCTAGCAGCTTCTGTTCTGTCTTTACAATTTTTTTTTCGAGGTT TATTGACTGAAATTAATTAATGAAAGCTTTCTTTGGAATCTTTAAACGAG ATAAATGAAATAAATGAAAAATTGTTCTTTTCTTTTCCAGCAAAAAGAGC CAAGCGTAAGCGGGTGTGCATGCCGACAAGTA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00071163TCONS_00071163Clytia hemisphaericatranscript
TCONS_00071162TCONS_00071162Clytia hemisphaericatranscript
TCONS_00071161TCONS_00071161Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00071162-proteinTCONS_00071162-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_6supercontigscaffold_6:162993..167774 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
11.96 11.76 130.23 142.47 240.8 213.77 104.1 119.35 63.73 75.16 53.36 46.68 28.15 29.6 29.79 35.63 56.65 46.65 9.38 16.1 17.57 23.38 22.05 24.32 55.27 75.96 12.54 7.81 15.83 12.84