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Sequence
The following sequences are available for this feature:
gene from alignment at scaffold_6:46790..56179+ Legend: gene Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044221 ID=XLOC_044221|Name=XLOC_044221|organism=Clytia hemisphaerica|type=gene|length=9390bp|location=Sequence derived from alignment at scaffold_6:46790..56179+ (Clytia hemisphaerica)
GAATTATCATTGAAACAAGAGAAACTGGTGGATGAATCAACAAAACGAAG
AAGAGCACTTGAACATGAAATCACACAAACTCTAACAACTCAGGTGAGAT
GATTTTAACCTGAAGACATATCTCGATTTTCCAGAAATAAATAtaagaaa
ttctttttgctaAAGGATGAGAAGTTTAAGCCTCATTCTAATACTGACAG
AAGGTGCAAACTTACCTCAAATTTAAGAAAGTTAAGAGAAAAGTCGTACT
GGAGCGGAGGTGAAAGTTTTCAAACActcgaaaagtaaacaaaccgtTAA
GAGGGGTTTTTTATACTGCAGTGAAACTTGATTCAATTGTAGGAGCGAAA
CTCATTACTCGGTCCGTTATTTTAACCCCCaccggctgaaaaaatcctat
cgGGTCTGTAAGAAGGGGATGTAGATTTGACTGTATTATTATTTATCTTA
CAGCTTGAATTGGACAAAGTATCAGAGGCATTTCGCGAAGCTCACCAAGC
ACGACAAGAGTTATTAGAACAATGGGAAAACACTATCAAACAAATGCAAA
GGCGGGACAACGAAATCGATGAAGCATCATTACGTTTAATGGAGTTGAGA
GTTAacgtcaaaacaaaacaagaagaTATGAAAGATCGCCAACAATTCTT
AGATGATGAATTGAATAACAATaaagagaaagagaagaagATTTCAATGG
CTGAACGAAATGCTGCTAAATTGAGATTGGAgtatcaaaatattgaaaac
tcAAGACAACAATTTCAAGATGAGgttagtgatttttttttactaaggCA
ATCAAAAGTCTTTCCTCCCATCTAAATAAAAATAAGgttattcttaaatt
gttcttttctttgacatttttcgagtctaaatgttcttttaaaattcttc
tttttgttcGCGTTTTACACGACCTTAGTTCTGAGTAGTTGGAATTTact
aacattaaaaaaaaatttcaacccgTGTATTGTGCAAtgatcaaaattat
tttcatttttttgtatagCTGGAAACGTTGAAATATAAAGTGGATCGTAC
GGCAAAGGATCTGGAAAGCACTCGTAAGAAAGCTCACGAATTGAAAAACG
AGGTTGCTATAAGACAAGACAAGTATGTGAATTTTGACATTAGATTTCAT
CGTGTCCAATAATGGAcaattccattttatatccatacagggagtaataa
acatttccagggggtaacctGCGAGAAGAGTTTCCAGGGGCTCTAAAGGA
gtattctttcatttttccaatgggggtaaaaagttattctaaaatttcca
ggggttaaAACCCTGACTtttgttcgtccaccctcactttaagggaaatt
taatggaattgCCTGNcccggggggggggcactcatgtgatctggcctac
gtcatgtgccgcgcttaagggtggggtttttcaacatcccaaaatgcact
gtaagggtgtgtttctgtgagattgtactgcaagggtcgaattttaaaac
aaatccaaaataagtgttaaaagaaaggtttttacttctcgtttatttga
aaaagtttctattgtctgataattacagctctgacaagaataattttctc
agtttttctttgaaacagaaaatttcccaagcttcttctttcgCGCAggt
ttacagctgagaaatatagtgcactataagggttgggtaaatcaagagaa
atgcactgaaagggtaccttttcagccattttgaactgcactgtaagggt
acgattttcaaaagcaaattttgcgcggcacataccgtcgtttcgaaatc
gagtgccccccccccgggttaaaACACTGACTtttgttcgtccaccctca
ctttaagggaAATTTAATTGAATTGCCTGATCAACTTCGGTatttgttcg
attgagattcggtTGTAGTCATTATTCGATTGAAATGAATCTTGATTCTT
TGAAACGTAATTTAACAAATCGAGTTTAGAGGGCTTGAAAGATACCTTAA
AACTTCGGGGCGTCTTCGCAAATTCGCTATTTGTTAAGATAATTAAATGT
GATTGGATATACGGTGGAAAtgtccataactcgaacacgcacgggggtGG
GCACAGATTTGTTCGAGTGAGGGAAATTTCGAGttcataaggcattgtta
aactgaagggactagaaaacttgttcgagttaaggagacatgcaagttat
agaggttcgagttaaacaGACTCCCACTGTAACtagtgtttttgattttt
tgtgcttttgtatcaaaactgaaaaattatttaggTATATATCTCGAAAA
TGGTGTATTAAGGCCGGTCTGCACTTTCATGcaaaatgagcgaaaacttt
ttaacgtttttgtaaggatattggtcggttgaaaaatgtagcaattccat
tggtcgaaattgacgtaacggttgaaaaaagttgaacttttGTTCGcgtg
aaacttttttatgacgtaatcttttcttcaggcaaaaacggTTGAGAAAA
TAACTGTCGCCAaattcgcgcgaaagtggagaccggcctttagcaATAAT
ACCAATCAATACAATATTTTCTAAATCACCTTTGTTAGATTATCACGTGC
TGTGGACGTCAAAGAAGAATTGATTGAACAATTGACATTGGCTGAAGATT
CCAAAATGACAGCTGAAGAAAGATCAGATCGTTTGGAAGCAGCTTTAAAG
AAAGAACAACAACGTATTGTAGATGTGGAAAAAGAATTGGCAAAACTAAG
AGAGATGCAGGTATTATTATGACTGAGTGTCACCAGAAATTAATACAGAC
CTTACATCAAACATAGGAAACTAGCCTCAGCTAAATTTAAAAAACGTAGC
TCCCACcttcacaaaacaaaatatgGAAGAATTTTGCATGCAAATTCTCA
AGAAATTTATTGCGCCGCAGacaaatctttttgtttagagGGGTCAAAAC
CTTCCCCAccgcatagatttttaacataatttaaaatattttttataacc
tatcagctctgcccccagttctattactCAACACTCGGcccccctagcaa
gctagcccccattattaaaaaaagccccaaattaatcaaaaatggtttag
ctCTCCCCCTAATTTTAAAGGGGAGGGTGCATTCTATACCAAAAGTTCCA
TCTTGAAGAGGGATTGGTTCCGAGTTTACCAGGTTTGAATGTCTGgagtc
attgcattgacatcACTCACAGATGTGACTTCCATGAATATCCCTGTATT
AATTTGTAACGAGATTCAACTTTATCAATGCCCCTGACAAGACAAAATGT
CTCGTATACTAGAGAcaacttctggctgaactttgcttattaataatttt
ttttatgaagtaGACTAGGAACGCTTGGTGAGAACGCCATTTTGAAAGGC
aatcacaaaaattcaaaataacaaaaaatttctttttaagttaAATACAT
AACAAAAAATGGGAAACCAACAAAAATAACAGGTTTGCAATGCAATcctt
tattttcaaatgaaaatattgcttaacctatttttaccttaaaaAAACAA
TAAGTAAAGCTCAAAATTGGAGAACTACCAGATGCCTTTGAGCCACTTAA
TCGCGACACCCAGTCTATAAAAAAGCTTTATGTGAACCCCGGGCTAACTC
GTTGCTAATTCGCTATCATTGCTTATGAATTTTCAAACAGTTCAAGAAAA
CACAAGATCTTTACCAAGTACGACAGATGGAAACCAACACAAATGCTGAA
ATCCATGGTGCCAAAGCTGCCAGTCGTAATTTGAGTAGTAAACTCTACAA
GTTGGATCAAGAATCTCTCAAACAACAAGAAATCGTCTATAACCAGGTAA
ATTGTCACTAAAGTTTTTAAGTTTCCATAACCTGTATAGTAAGTCTGCGA
CCACAGTTGGAGGCAACCCGAAGGTAGAGGAGGGCGCCACTCTTTCTCCC
TGAATTGCTCCACTTACCCATGATCCTTCTCTTAGTTGGTGAGCAtcaag
cagagaggcatcaagtaccattttggaaatctttggtatgatccggctgg
gggttgaacccacaaccttgcgcatcgtagccggatgctctaccattgca
ctacggtcgcttgaaacttgaaacaaGTTATCTGTTCCCCTGAATTTATA
ACCAACTTTATTTAACAACAACCTAACCGAGCATCTCGAACAGAGTTCAc
ccataaactcgctaatgactGAATGTTTGTTGATCACTCCTCAGTGGGTG
GGATCTATTCCGAAACATCTATCTCTATCTATCGAGTGATCACAGAAAGT
ACTCATTGGATTTGTATTCTTTGACTGATTATTCCTCTTATCCGAAATCT
TCATTGACTtgttttttcaggattttcaacTTCAACAAGCAGAACGCAAG
CTGATACGTTTACAGGGCGATCGTACGAATGAAGAGAAGAACCAATTGAA
TGAGAAAATCAAAGTATCTTTTTTNCTCATTGACTtgttttttcaggatt
ttcaacTTCAACAAGCAGAACGCAAGCTGATACGTTTACAGGGCGATCGT
ACGAATGAAGAGAAGAACCAATTGAATGAGAAAATCAAAGTatctttttt
tgtcttttcttttctGTTAATATTAGCTCTAAAATTGTAATTAGAtggtt
tatttttacattttaaggaTACAGTTAGCGATCAAACACGTTTTTGTAGG
TCACCCGGTAGTCTAGCAAGTTTATTATATTAAAGAAATGCACGAATGCA
TGAaaatagcctggagatccatgttatgatttcttattttatatactgat
ggcaaaatatatagcatggcttgggctgacagtttgaatttcctagatcc
taataacggttaaaaacatagccaatcaaattttgttattcttttactgg
tcacactttcttagagaaagcttAAGTTcagaaatttggtttttatttta
gtaagcgaggacagcgctaaattcgaatttttcactttaaattttttgaa
gcagAAATCTGCTTCACAACTCGtacccgtcctgtatatatcggattata
aaaatacaggacgggtctcctgtctagcaTGAAAAAGTATTTGATAATCA
GCTATTAGTCCATATATACTATTCGTTTGTCTTTCTTTAAGCAATTGACC
GGCATCTTAGAAGGTCACCAAAACAAACAGACCATGTTGACAGCACAGCT
GAAGAAGTTAGGTGATGACTTAAGAAGAGCAAACCGTGATTTAAGCAAAG
GAGAAGATGAAACAAAAAATCTGACCAATAAAATCGGTATGTCTTTAGGG
ACGAttaaatctcaattaatttttcatGTGATATActagaaattacatca
aaaaagAAATTTCTCATGTGATATACTAGAAATTACATCATGAAATATCA
TAATTTAGAAGCGCCGTAGATACAGTTTTGACTTAATTCTGTTTACTGTA
CAATAGCAAAAACCCCTCTTGTACGTTTACAGTAGTACTAAAAATCAAGG
CACAGGAACCAAGGTTGGTCTAAGTACAATTTCACTTGGCAAGTTCTTGA
TTCTGCATTAAGACTTGCTCGTGCCATTTCATCTGGACAGGGTTTGCATG
GGATCAAACCCCCCCCCCCCAGGAAGATGGGGAAAATCAACTTTTGCCCT
GGAGGGGGGAGTGAATATGGGGGGACTTGGTGGAGGACTAATGCAAATGG
GGCATTATAGAAAATCTTATGGGAAGTGGGGATAGAAAGTGCAAAAATTA
GGTATAATATTTCAAATAGATGATTAAGTGTGTTTATATTTCCTGCATTT
GTGCGTTCATTACAGGAAATTGTTATTTTTGTTAAGTCATAATGCAAAAT
ATAGCGAATCGTTTGGTCACAAAATATTCTTCCAATAGGGGGAACCCCGG
AAAAACGGTAGGTGGAGGAAGAAGACCAAATAGGGGTTTTAGGTCCCAGA
TGGGGGGACCTGAAAACCTGGAGGACACCATGGTTCGGGTCTGATACTAC
AACGTGGCAAATGGATTATCCGATGGTGACATCGCTATCACATTTTAAGA
CAACATTTGAATTTTTTCCCCGTGAATAATCGGGTTATCGTGCTGTTGAA
TCTCCATAGCTCTTTTATGTCTGAAAGCACCTGGGATTTTCCTATCCTAC
GGTGAACGACTTTCTGTTGATTAAGCTTAAATTACAAACCATTTTCAGAG
ATAACTTTACCCTCCTTCTTTAAGGCGAATTGACTCTTCATAACGATTCA
TCGGAGCGTGAGTTACGAAACATCAAAAACAAAAAGGAAGATCTAATGGT
CGACGAAAATCTACTCAAGCTCGAAATTAAACGATTACGCGACCAGCTTT
TTAACCGTGCGACCGAAGTTCTTTCGCTTGAAGACCGCCGCTTGTTACTT
GAAACAGCAATGAAGGAAAGGCGTCAGGAAATCTACATTCACACTGACAT
GTTGAAAGCACAAGTGAAGACATCGGAAGACGAACGTCAAAAAATTAGGT
aaagttggttggttggttgctTGGTTGGTTGGTTAGTTGATAAAGTAAAA
AGAGGTTTTTATAGGACTGAGCCTTCCATGTGAAactatttgtttttctt
tttttcatgaaaCTCACTTTGCTTTTTGTTGAACgtctttttaaatgatt
ttcccTCAGAGAGAATGTACTTCACAGTAGGTTCGTCTTGcaattcctgc
attaataacacgcatgcgtaatttgttgTTCCTTTAAACCACATGGAatt
taattcccgtgataaacaaagaggaataaatctgtaggggtggtacaggc
aCGGCGAAATATAGAGatatttgttttgaataaaCACACCTTCTAGAGGA
TAGCGAGACGTCAGGTTCttttatttaaagattttcaatAATATCATAAG
GAAATTCTTTTAGTGCTGAACTTCACGAACGTATCTCAAAGATTGAAAAG
CTACGAAAACGCTATGAAATTCTCATGGTCTCGATGGCACCGCCTGAAGG
AGAGGAAGAAAAAACACAAGCTTATTATGTTATCAAGGCAGCTCAAGAGA
AAGAAGAACTCCAAAGGACTGGTGACCAATTGGATGCCAAAATTAGGAAA
GCTGAGAAAGAGATAAGGTATAATTTTGTCTTTTCGTCCGTCTAGTAGTT
AAACGACACCAGGCTTTACCCTGTTTTCTCTTGGTATTTGAACAGCCTTT
TTCagagcatttttcatttttctaacaCAGAGCATTGAAAAACACAGTCA
AGTTGATGAATGATCGTAATTCCACTTATCGTAAGAGTTTCAACAACGTA
GAAGAAACTTCTGAAGAATATGAAAAGAAAATGCAACTTGAAGAACAATT
ACGTGCTGCAATGGATAAATTAAAGTAGGTGAACatggtttttttatata
aaaacaaaccttataaggcttcgatgaccaaaatattaagaacaaggcTT
TGCGAACATCCGATTCCTTAAGAAATTGCACTAAAATACAAAaagggtga
aaataaaaacatcataagaacatttctaggcttaacagggcttaaagctc
aaaaattaaagaacTTGCGacgacttcaaaaattttggatgctttcttaa
aaaaaacgtgtaggcatTATTTATGCGATAGAGGTTTTTTCAGTTTGTCT
GATTGATATCTAACTCTTTGACTAGCATAAATAAGAAGCGTGACCGGTAT
AAGCTGACTAATCCACCatgttattttttattcgggttgTAGACAGTGGG
atttaaatgtttcgaattgaAACGTTCGAAAGTCTAAGCTAAAAAATAGA
AATCAGCACGGTGGAGTAGTTGATTTTAAAACTGGACTGGTTTCACAGGA
AATCTGTAAATAGTTAGCCTATAAAGTTAAGTTGTGCTACTTCGGGAAAA
CTTGAAAACCCCCCTGTACGATCTCATGTCGTtccaaaatcaaagaaaac
caTTCTAATAGCCAAGTAGTATATAGAAGTATATAGGTTTTCTCCTCACT
CATCAAGTGCtgctcttattttttttggcttctttaatacttgaaatatt
cttatcGTGTTCTTATTTTAAAGAACAAATTTTTTGCATCTTAAGTTTTT
ATCCTTCTTATTACCCTACTACAACTTACTTATCGTTTAAACTTAAAGAT
CGCACGCTTAAATGGGAATCTTCAGGGTAATTCTTTTCTTGCTATTTTAC
TTGAGAGATTTCTGAAAAAGAAACGTAAACTCGACCCGTTTTTTTTATCA
TCGTTATATTTCTTTAGATACAAGAAACGACAAATGAAAGAATTACAAGA
AGACCTGAGAGTGATGCAAGCCACTGCTGAATCCTTGACAGTCGATGAAA
ATGAACTTGTTGTAACCAtggaagaaaaacaaagaactaTTGATAGGTAA
GAATTGTGATTTTGTGTTTGTCATTCATTGATTGGTTgaatcgatatttt
acgtggatagtcAAGTAAGCTAGGACTTTTTAGGcaacattttgtttgtt
ttcatgaGGTCCATGGTGAGCCAACAGAGTTATCTGTAAACTGAACTTAA
GGGAACATTTAGAGGCATAGCCGACGTAACTCAGCTATCTATGAGCTGAA
CTGAACGGAAAATTTACGAAATTATAAATCCGACATCGACGGAGCGAGGC
CTCGGACAGAGAACCCTTGTTTGTGGCCGTGAAGCTTTATACTAGTCGGT
GTAAATTACACAATGTTTCTGATTCATCGAAATcccattttggaaaaatg
atcAATGTTATACTGAACAGACTTGATACTTAAAAACACGTGTGTCACAG
ATCCTTTGGGAGCACTGTTCCTCTGAAAAATTTggctccaaaaccatccc
catcgGTGTATTTGACCtatgaacaatagaatttctatccccttgAGATT
TCGATAAAAATCTTTATCCCTACTGTGGAAACAATTGCCACTAGGACTGT
GAGACTGGGgtgtaatatttctttttttgaattttagcttaCAAAAAGAG
CTTGACGTTCAAGAAGAGAAAAAAGAGCGAGCGGACAAAATGACACGAAA
AGTAATCCGTGATGTTAAGGGAAGCAGTACTGCATcaaagaaatctaaaa
aaggATTCGAAGAAGGAGAGGCTGNAAGGGAAGCAGTACTgcattaaaaa
aatctaaaaaagcaTTCGAAGAAGGAGAGGCGGACATCAAAGTACGAGAG
CTACGAGATTTTAATAACAGTTTAATGAAGAAATTGGGTCTCATTTGTCG
AGATTATCCAGACATTGCCCCCGTCTTAACAATGTATTGTCAACAATCAG
GACTTCCGGTTCCTCCATCACCCGGACCAGGTAGTTCCCGTGGCTCATCG
ACTACTGGAAGTGTTCGATCGAATTTGAGTTCAGCTAGGT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
The following polypeptide feature(s) derives from this gene:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_6 | supercontig | scaffold_6:46790..56179 + |
Orthologs
The following orthologs are found for this feature:
| Ortholog Name | Description | Organism |
|---|
| CCDC39 | coiled-coil domain-containing protein 39 | Homo Sapiens |
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