XLOC_044220 (gene) - C. hemisphaerica

Overview
NameXLOC_044220
Unique NameXLOC_044220
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_6:40743..44409+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_044220 ID=XLOC_044220|Name=XLOC_044220|organism=Clytia hemisphaerica|type=gene|length=3667bp|location=Sequence derived from alignment at scaffold_6:40743..44409+ (Clytia hemisphaerica)
ATCAAATCTTAGTATAAATATCGACTAACTGTTGTTACTGAATCAGAGTA
AAAATGAAGTACCACATTATAGTGTTATCGTGTTTNtcatacccgtcacc
tcgtaaACCCAGTACCCCCCCCCTTCCTAATCAAGGAGGGGACTGTATGC
GCCACAATTGTACCAAAAAATAGGTGTTCTAGTAGGTGAATGTAAATAAA
TTTGTTAATTTCTAAATAGTTCATAATGAATTTTACATATTGAATGATTA
TATGATTATACTAATATTATATTTCCTCGAAAAGATTGAAAAGGATAAGT
TATTCCACtagtaaaataatttaaatattTGATACCGTTTTACGTCAATA
AACTTAGTACTTATCAGTTGAGCAATTAGCTTTCAGAAGCTTTTTTAATT
ATCTTCAATCAACGATGTCATCAAAATCAAAAATGAAACTTGATTATTCG
TTCAAAAATGACGTCACCAAAAAGTTAATTGTCAAGATCATCTCGAAAAT
CATATCAAATCTTTGTATAAATATCGACTAACTGTTGTTACTGAATCAGA
GTAAAAATGAAGTACCACATTATAGTGTTATCGTGTTTGCTATGGATAAA
ATTAACAGGTAATTACAATTTTTTTGTACAGTAGAGTCTCGAACCTTTAT
AACTCGagtgtctccttaactcgaataagtTCCCTCGTCCCTTACCGTCG
TTtcgtataagattcccatttcctcATTAagattttcgtcacttttccgg
GATAACTAGCACGAGATCAGAAAGGGTTTGCTTCTAAAAGTACGGAAGGT
GTTGTAGTACTCACGAAATtgcctaactttccgaagcttaATTTTCAACC
ACCCAAAGTtctggtctttttccgctagaaaagtggAAAAGGAATCTTAg
tacggaaatgggaatcttatacaaaacaacggtatTTATACCGTATATTA
TAAAGTAAGGTTTATACTCCGTAACTAGAATTTtcctaactcgaacaaat
ttgtgttcccctggcgacttcgagttatggagactcgacTGCATTATATA
TTTTCTAAGTGCTATGGAATAATAGTTTTTTTAGTCTTCACTATCATAAA
TACTTGGAAGTATTCTTAACTTTAATTGAGCCTGactctgagaatgtctg
tctttatgtttcaaaacctttaaaaggCAGAAACTTTGGAAATCGTCAGA
TTCGGATGAAATTTAATTAAGCTTGCTCCTTGTGtgccttttttcatttt
ttcaaaaatttttatctttaagGCCTAGAACGATCTTTTCACTATACCTT
CGATTTAGCCCCCGTTTGTCTGtgtacaaaataatttttttttttaactt
tcagaatgttttcaatggGACAATTCAGTTAGTGATTCATCCGTTTATGC
TAACAACTCAGGCTCCGCAATTATCAAGTTCAGATATAGCTATGGAGCTG
AAGACCGTTCAAGTGTTTATATTACATGTGGAATATGGAATACAAATCAA
TCCAAAATCATTCCCATGGTGAATAAAATGGGTAACCAACCTGCACAAAG
AAGAAGTGGAGTTACTGGCGATGTTTTAGGGAATAATGCAGCTCTCTATA
CAGAATCTACACAACCAACTGTTATTGGATTAAGATTGAGTAATATTGCA
AAGACCTTCCCAACTCAGTACCGTTGCGATGCATCTTTTACTAAAGCTGA
TGGTGTGGCTGATAGTGAAGCAAGTGATCGTGTCAATCTTATTGTCTTAG
GTAAATGAAACCCTTCACTTTAttgtgtttgaaatttttaatcaaaCATA
ATTGATGACATTATCAGAATCAAATACACTCAATTCAACCAAGCTTTCAG
CAAATGCGTCTCAAGGAATACTATTGATTGAAGTATTGTATATAGCGTTG
TCCATAGCTAGATGTtgagatatttgactttgaaaacTCGCTCATGTATT
TGGATGCTTCTGGCCCTTCTCTGATTTTTTCTTAGGGATAAAGCTGACAA
AATTTATTAGCCACCCCGTTATGAAGATTTACTCCATCAGGTGGTAAATT
AAGTCTAAGAACTTCAAACTTTCTAACAGTCTCTAAGCTACAAACCCTTC
AAAGCTCTCCATAGAAAATTTTTGCAGGCTTGTTAGCTCAGCATTGAAGC
AATTGAAGcaacatttttagatttcattAATCCATCtgtaatattttatg
ttttcagATCGTCCAAAATTTGTAGNAATATATCaaacagccttaagtcc
taaattttaggccaaattttattttctatgaagcattgacatggaatgtg
tagccttaagtccaacacatctcaacctttaaagtcaattatctaaaaat
gggaaaaatggacttaaggctgttttgaattgacacggcgatatGGTCTT
TCCTCAATAGGATATACAGTAACAGTGTTAGTaaaagtacacattttttt
cttaagaaaaattattgaagcctTCGGGTATTCTTAGCTTTTTAAGTTCT
caaaatgttattattttcaccattttgtgagaatttttgttcaatttcat
aaaaatttggtACTTTAGAGTTTAAgacttgaaatgttcttaatttgtac
TTAATATTTTGCTTAGCGAAGCCATATGTTCTTATCAAATCTATTCtgat
aaaaaagcgtgtattgatAAATACGATGTTAttgtccgttacagtgatag
taaaggcgggaaaatacgGCGGTATGTGGAAAAAAAATCGGTGGGCGAGT
TTtgaagactggcaactctaccgactttAAACTCTTTTCCGCAAAAAAct
cgtttgcgaattttcttcgctTTTGGGTGgccttttttcttagatagtga
ttcgtcttagactatagcatagtctagtaTTGATAGTGAGACTTGCCAAC
TGAAAAGGAAAGATACATTTTAATTTTGACTGTCATGTTTAGCAATTTTG
ACTCAATGGGTAAAAGCCATGACATAAAGCAAGAAATTACTTTCAAAAAA
GTGCTTTGAAAGTTCAAAAGTTGAACTACTCAAAAGCTATTGTACTGTAA
TTATAGGAAGGCGAATTTTTTACTTTCGACCAATATTCAATTAATTTGTC
TGTTGAACCATGACAATTGATTTTTGTCAActtcaaacaaaattgaaaaa
tcaaaatgtgggcttaaaattttttaaagatactcCAACGATAAATTGAA
TGCTTTAAGGCTGGGGAACCagaagtttttttcaacaatgcaacatgctt
ccatcccaccaacctgaaacgctttctcgtgtctccatcccatttttcat
ttaataacatttgtgcttctctcacttttatcccagggacaaaatcagcg
tgtcttttgggtatttccctcactttttgtcccatgaaataaaaaaagaa
accatgagacacgcaccttttttcttgtgttggtgggatgaagcatgttg
cattgcaccaacgcaaaaaaaagGTGCGTGTCCACAAGCCTTTACTATAC
CCTTATACTATGCTATACCTCATGTTTTGGATTTTTGGTCATCGATTTTT
TGATTCGTAATAACTCacctttattattttatattttcagaaCGTCCAAA
ATTTACAAACTGTTTGCAAAACATACAATCCAAAGAAACTGTGGCTGGCA
ACTCACTTGATATAACA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00071140TCONS_00071140Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00071140-proteinTCONS_00071140-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_6supercontigscaffold_6:40743..44409 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.13	0	0.37	0.31	0.93	0.85	0.2	0.93	0.56	2.22	6.02	0.15	55.39	33.02	26.54	79.59	15.34	16.38	0	1.46	0	0.21	0	0.14	0.15	0.3	9.51	3.24	7.19	5.23