XLOC_044121 (gene) - C. hemisphaerica

Overview
NameXLOC_044121
Unique NameXLOC_044121
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_58:880273..886385-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_044121 ID=XLOC_044121|Name=XLOC_044121|organism=Clytia hemisphaerica|type=gene|length=6113bp|location=Sequence derived from alignment at scaffold_58:880273..886385- (Clytia hemisphaerica)
AAAAAAAAAAACTTCGAATAATGGTATAAGAATGTTTGAGCATGAATTCT ACCATCACAACACCGTACACATTCCAATCAAGTACGGTCAACAAAACAAC CACTTACACAGTCCAACCTAACACGAACCCTCCGTCCACCACACCTTACA CAAGCATGGTAAATACGACAACAATGAACGGACTGTCAACAACGGAAGAG TCCGAGCATGGTGTGATAGATCTGCCATTGGGGGCAAGTCTGCTTGTAAT CAACATATGTATCATTGTTTTAAATGTTTTCATTATCGCGGTCATCGTGA GATTTCGAACGAAAAACGCAATTGATGTTTTCGTGCTGGCTCTTGCGACG ACCGACCTTATCAAAGGACTGATTCCCGTTCCGATGTCAGTTTATATTTA CCTAACGGAATGGTATTTGATCGAAGGTAAGGAGACGAGCACGTTCCGCT TACGACTTGCAGATTACGATTAATCCAAACGCAATGGAATATGATTATGT TTGGATTGGCACTTTTAGATGTTAATCCGTTCTAGATTTAGCTTTCGTAT AAATTGATGTTTTTTTTCAAATAAGATTGATTTCATAAACCAGCTGATAG AGAAAAAAGACCTGTGGCTGAAAAATCATTTTCCTAAGCGAGGCTAGCTA TATAATTGCACTTCTTGAGATTGTTATTTGTTAAAAGCAGAAAATTCAAT TGAAATTATCTCAAAGCAGAAGAAAGTTTTTTCGGAAACAGCAATGTTTA AAATGACAACACTTCAAATTTGAATTTGGCGAAAATATTTCAACCTCAAA TATGAAACGGAAATTAAGGACTACAAATTTGGTTTTCCAAATTTTAACTT TCTCATCAAAAATGTAAAATGAGAGATTACAACGGAAATTACAATGATTG CTTTGTGCTGATTCTAGCTTTTAGAGCTGCATTAGTCGATAAACACAGGG TCAAAGGGGGTGGATGACCTGGAATCAATTATTGAATACAATAAGAATAA GCCTTTGTTCTATCATACCCTTTTTCACTTTTATTCAGGTTCGTACGCGT GTGATTTCTTCGGTTGGATCGCCTTCACCACAAATTCTGGTTCAATGTTG TTGCTAACACTCATGTCCATCGAACGTTTCGTTGCCATAGCACACCCCTT CGCGTACAAAGCTTGGGTTCGACCTAACAAAATACTCGCCATTATTCTAA CAGCTGAGGTTTTCACGGGGATTCATTCCGCCCTCCCTTTACTGGGTGTT GGGCGTATTCTACCGTACAACGGTGGCGCTTATTCACACTTCGATTATTC GCGTTATGATTATGGTACAATGGCTTACTCGGTGTTCATTATCTGTTATG GTTTCAGTATGATACTGGTTGTCATGGTAGCGTATAGTTTCGTCTTCCAT AAAATTCGTGATCTGATACACCGCCACAAGCGGATGACGAACGCACGGTC AGATGGTTCTGTGAGACGCGATAAATCGATAAGACAGTTGAACTTGAAAA CGGAGACAATGTTTTCGTATTTGACGGTTGCACTGATGGTTTTGTTCTGG TTCAGTTGGCTCCCATTCTTGGTAAGTTTGTTTTGTCAATGATGAGTACA GTGACTATAATCACAAATCAAAGTAGGGTGGAGCAAAATTAAACATACCC CAACCTCGTTCCCTGTGTATAACCAGCTTTGCTTACTTATAGTGCTAGAT AATAATATTCTCTGGCATCTATCAGTAACGTAAATAAAGGGATCCAAATA AAGCCTTGAATACACGGGGACGAGGTTGAACATACTCATGGGTCCAGTAA CCTGATACCGGTTGGGCCAAGATGAAATAGTTGAACGCATAAACTGATTA AATTATAGGGTCTTCTCATCAGTGCATCTTCCCAATATGAATGAGTTTTA AGTACTTTTCAACTGAAGCAAATTATCCTGTGGTTGAGGGCTGGACCAGG TTTTGTGACAATTTTTGAAAATATACAAATATTTTTTTAGATGGTGGTGG TGGCAAGCCAGATTGGAGCCAAGCAACCCCATGGGAAGCTCGATTTGTTT GCCATACGAATCGCAGTTGTCAACTCCATGCTGAATCCGATTGCATGTGC TGCTCTATGTAAACCATACCGAAACGGAATCATGTATTATTTTCGGGTTT TTTTGTCTTACTTCGGATTCAAGAAACCGGACGACAATGTATGGGGTGAG TTATGTAAAACACTCTTGTCTCGATGACCCAGTTAGAACTCTAGCCAGTC AGAGTGAAATAAAGGAGCTAAAAATACCGTTGGCTGTCTTGTTTTTAGTG AGGGAGTTACCTCAAAACTTCGTTTTTCTTTTAGACCCGTGGAAGAAGAA CACTCGCCGTCATCACACGCGACGTCACAAACCAAGCGTTGTCGACTTCA ATGAACGTGACTTCGCCCGATCGGAAATCTTTGCTTCTTCGTACGATGAT TCGGGTTTGGGTACGGGTGAATTTTGTCGGACACGAATCCCTTCTGTTCT CGATTCTTTTGAATGTTATCGTCAAAAAATCTCATCTCGGTGTGAAGGAG AGCCATTACTTTCAAGCACTGAGAAGGAGGGTTTCATGAATGGAGATCAT CATAAACACATCGCACTTTCATGTAACCATGGTAACTACATATCATATAA TAACTCATCCACCCATCCATTTGTTCATTTACATTCAGTTTCATTGTGAT GGAGTCAATAACATTCGCAGTTTTTCCACAAAACTTTAATATCAATTTAG CATACCATGAAATGCCATATGGCCAAGTCACGTATTTAGCCTTCTTTCTG TCTCGTATGTATTATCTTGACCTCATTCAAAATTTACCAAAAATTCAAAT ATTCAAAAATTATAATGTTGCTATATATCCGATTACTTAAGCACAATAAT TATATTTCTTTCAAACACGGAGTTTTCTCTTCATCTAGGCTTCTGCTCAT CCTCTAGCGAAAAAAGGAAGTATATATATAGAGGTCTGTGATTCAGACTA CTCTTTATCTAATTTCAATTTCTATTTTGTTTGTAGCTGCGCAAGGGATT TATCGTAAGCAATCGAAAGATCGAGAAAGTTTATCCACTCTGTCTTCCCA GGGATCGGAAACTTCCGATTTAGAGGACGGCAGGCGAAGTAAATCTTCAT CTCGTAAAAATTCAAAATATCGAAAGAAATCCAGTGTGAGGGAGGGTCCT GATGCCAATAAACTAGTGAATGGAACGCCTACTCCGTTGCAGAGGCGTAA AAAGATTTTCGTAGAGAAAGTTCAGAAATATATTCATCAGAAAAAAGAAC GCAAACACTCGTTTGATCTATTGGACGAAAAACCCGTTCGAAAAACCATC TCTGCGGGGGATCTTTTGGATCCAGATTACATACAAATGCAAGAGAGACA TCGAGAGAAACGAAAAGTGAAAAGTTTTCAAGTCAAGTTGAAGAAAAATG AAGACTACGAATCGAGTGGAAATGAGGCTGAAGAAAACGACCGCCTTCTT GTGGCGGTACACCCAAGACGTGAAAGGGCGTCCACCCTGGGTGAAATGGA CGAACTTGTAACCACCTTATCCAACAAGCATCCTTCTTGGAAAAACCTGA ATCAACAAGAGGATATCGAAACACCTGATGTAAATGACCAACACTGCTCG GATGACAAGGGCCATCATCAAGACAAAGTGCTGTTGCCAAGACAACCGTT CGTTGCAAATGGCAGCGCGTACACCATAATAGATGGTCCAGAAGAAGAAC GACTAAAAGGTGAGTGGAGAAATGTTCTGATGTCAACATCTTGAAGTTCT GATGTCAACATCTTGAAGTATTTGAACCGGGGGAGTACTTGGGCACAAAG GGGTACGGAATGTGTCGCTGGTCAGGGTACCTTTTTTCGCCTCCCAAAAC ACCAAAACCCTACTCTTGTAGAGTACCTTTTCGGGGATTTGGAGAAAATA TGGAGAAATATGGAATTTCAGTCCCATTGAGTGTCACTTTTTTAAAAAAT GAGTCCCTTTTGGGGTCCATTTTTCGAAATTCAGCGCCACACCCCTGTCT GTCGGAAAGGCTATTACTCCCCTCTCCCGGGGTATTTGAGACAGTTGGTT GAGGATGATGGAGTGAAATAAAATTGTGAGAAGTTATTCATTCATATCGC AGAAGATCGTAAAAATCCCATTCTATTTTTGACAGGATATTCAACACAAA AGAGTGAAGAAGAGAGGCGATGTGTTTCAGAAGCATTTTCGGACGACACC ACCATCCCTTTGGACAATATGGCGGCAAAAGCTTCGAAGAATGGGAAAGT TGCTACACATACGTCCGCACATTCGTTGAAAATGATTGATCACGTGACTA AAGAACTGGTTGAATTTTCACAAAACTCTTTGAATAATTCAGCCTCCAAT CAACCAATCACGTAAAGAGTTGAAGATCACGTGATATTTGTTCGTGGAGG AGCTGAAACATGAAGCCAGAACAAATGGAAGTTTACAAGCAGTTGAAGTT TACAAGCAGTTGAAGTTTACAAGCAAGTTGAGAATCACCTTCTTGAAAAA CAAACTATTGACATTATGAAATGAAGCTGGTTGATTATATTGTACTTTCG AGGTACGGAGCTCTCAAAATTGAAAACTATTTGATGAAGATCTAACCCAA TAGAATGGGTGCAGAAACCCCCATTGGACCGGTTTTTCCCCTCTCATTTT GAGCTTACAGGACCGATTGAGCTCTTCAGAACAACTAACTTTTCCTTCCA NCTTTTTCCCATCTCATTTTAAGCTTGCAGGACCGATTGAGCTCTTCAGA ACAACTAACTTTTCTTTCTGCCCTGTATTTAACAAGTAATCGAGATTATT CCTCGATGTAAATTATTAGAGCTTTGTATTTTTGTAAGGTAGAATTTTTT TATTTCAAATGTAAAACATAGATGTGCGAAAATATTTACAGTACCAAGTT CCATTATAACGAGGACAAAAAATTTTCCACAGAAAGTGGTGCTTCGATAC ACCCCTGTCTCACAGCCTCGGTGGAATTTTAACAGCAGGAGTAAAAAAAT TCTATTGAAGTCCCAATGGGGATAAAATTCTATTGTTCCATTGTGGATGG TTTTGGAGTGAAATTGTTAACAAAGAATTCCGAATGCGGATGAAATCAAA GCCAATTTTCCAGTGGGGCTGAAATTGTAGGGTATTTTTCCCTCTGCAGA TGAAATTCTGATCAAATCTTTTCTAGTGGGTTAGGGCCTTGCCTGGTCTG TGACGCAGGGGTCTTTCAATTAAAAAAATCGAATTGAATTATCATCGGAA AGGAATAAGTTTCGGATCCGAGGAATAAGTATAAAATCTATCAAAATCCC TGACTTTACGCTCAACGAAAAAATGTCACGTTTGAATCAAATTTCTCCAT CCAAAATTGTTCAGAAGTTTCTGTTCCTTCCGCTGCCACTTAGTGTCCGC TTCAAAGTCTGTCCAAAAAAAAAGCGGGACATAAGATGCATTGTAAAATC ATTATAGCAATGCTTCATTTTAAGACATAGATAACTTGAAGCTTTCTTAT CTTAAACACAGCCATGATTTTTTTGGATATCGAATACAAGCTGAGCGAAC GAAGGATAATTGGAATAATCACGAAAAAAAGACTGTTGACTGAATCACAT CTGGATTCCTGGCCCGCTTTTATTCGGACAAACCGGACACGCTGCATTAA AGAAAGTTCTAAACAAAAGGCGCTATAAGCCGTCCTTTGCAAGCTTGTTC TGCATTCAAACAGAATTAAAGGAACGATCCTACTTTTCGTTTAGTTTGCT TGAACCATCATATATTCAAGCCCAACTCTTGATCGAGTCTTATCCATTTC TCACAAAAAGAAATCTTTCAATGAACCATGATCTTGATTTTGTGTACTTT CGATTTTCTGTGTGACGTGTGTCCAATAGATGATGTTGAAAAGGATGTAA GCTGTCGGGAAGAGAACCATACTGGCTTTATCCACCAATCGGACAGCTCG CTTGGTCACGTGCATACAAAACGGGTTGCCATAGATACAGAGCTTCAAGT TGGGCCAAAATTTGCAGAAAGAGCTGATCTGTTGGATACGGGAATTCTTT TTGGCGGGAATCT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00070995TCONS_00070995Clytia hemisphaericatranscript
TCONS_00070994TCONS_00070994Clytia hemisphaericatranscript
TCONS_00070993TCONS_00070993Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00070995-proteinTCONS_00070995-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_58supercontigscaffold_58:880273..886385 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.04 0.02 0.03 0.01 2.52 2.05 3.01 3.48 2.2 3.38 1.95 1.81 9.81 9.21 3.31 5.06 2.63 4.07 9.82 13.72 2.52 2.31 0.25 0.26 0.49 0.64 0.02 0 0.01 0.03