XLOC_044076 (gene) - C. hemisphaerica

Overview
NameXLOC_044076
Unique NameXLOC_044076
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_58:1092205..1099673+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_044076 ID=XLOC_044076|Name=XLOC_044076|organism=Clytia hemisphaerica|type=gene|length=7469bp|location=Sequence derived from alignment at scaffold_58:1092205..1099673+ (Clytia hemisphaerica)
GGCGTATCATCAAGTAGCGGAATACCGGCATGGCTGCTGATTGAAGAAGg
caattttttaatgatttttggtCGTAGGACTTTTTGGACTTTTGGTGGTT
TTTGACTgtcattttggtgttttttgtaATACTCCTAGGTAGGTTGATCT
ACATTTGATTTATTTAGAGGTTAAGTCAGCTTTATACTGCTTTATATCAA
GACTGTTAAATCTCTAGTTTGCGCGATATCAACAAAGAAGTGtacgaccc
tgccggtgcacccgacagtcgggtgttttgtcgggtgctgaaatttctaa
atttgcgaaaacacccgacaaatagtgcacccgacagtcgggtgttttgt
cgggtgctgaaatttctaaatttgcgaaaacacccgacaaatagtgcacc
cgacagtcgggtgcttaAATTCCTAACTTAGTAAAAACACCCGACGATCA
ACACCTGACATCGCCTAATGGGCATTTTGCGGGTTTACGCCCTATACTAT
TTCCCGCTATCTTTGCCATCTTTGCCGATGCCGTGGACGTCAGTCAAGGC
GCTATTGTCACTGGGGCATAAAAGGGCTGGCGTGTAAAATCGAATCTGCG
ATCGGAACTACCTGAGGCTTTGTAGGGGTCTTCGATTCCTAATCGGTGAA
AACAATTTCGGGGGCAgaggaaagtgacgaaaattctaataagcttcggc
gtaataagggccggtgcaTCTATCACCCAAACTCGAGTCGAACCTTAGTT
TgcttttttgatttatgatattCTGACAGCACTCTGTTGTTATCCGTGAA
ACGATTGTATCGCATCCatcagtaaaattaaaaagtgcgaTGCAAGTGGT
CCTGGGTACGATTTGGGCGCGCAACCTCGTCCTGTGTATCCTAGGTTCTT
TTACGATATTAATTATTACTGATCGATACGATAGAAAGGCCATACCTGAC
ATTAACCTTTACCCCCGGGAACCGACCTCCCATGTCAACTAAATCTCTCA
ATATCaatcattattttttcagaGTCGCAAATAAGAGAAAATGAATCAAT
TAGCGGAACAGGTGATCACTTTTAATTTGATATTTACATTTTAGTCGTAA
AAAATTTGCTGTGTCTTTCTTTCGATTCTGTACTTTGATCAAATATCAAA
TCAATGTTtcgatattcttaaattccagCCTGCACTCGATGGTCAATCTA
GTTCTCCGTGTTTAGGTTTGAGCATCGATGGTTTGAGGCATGACAATCCG
TTCacttttttctcttcttttcttcgTTTTAGTCTTACATTCTGATGGCG
AAACACGCTGACGTGCTCTGGCTTATCCAAGTAANATTGTCtgtaagacc
atgttcagacgttacggtttcatATCGTTCCGGTACGATTTCTGTTACGG
ATCGATAGTGTTCATatttggtttcggaacgtttcggggCAAGAAAATGG
AGCGGTTCCGTTCCAATGAAACCCTTTTGACCTGTTTTGCTTAGTaattg
taacgtcttcttttttgatgttTCAAATTTTGGCGCTCACAATTGTTTTG
CAACCGGTCGTTTCGGAAcgatacggaaccgtaacgtctgaacatggtct
aaattattgttaaagaataaaaaggttgttccaatttcttcttttgatca
gCATCACACATTGACCATAGCGATATACACCCACTTTTTTCTTttgggtg
ataaaagagaagagaaaaattgCCCCAGCCATCCAAACAGTTTGCATGTA
CGTAATGGTTACTTGTACAAGAACAGTGGTGGTACGCTAAATAGATAGAA
CAAAAAATTCGGCAAAGTAGTGTGTCGTTACAATACGAAAACCCAGGTAA
TATATAGCGTCAAGTTGACGAAGTTACTCAATCAGCTCAGGACAAATTGA
ACgttgcttaaaaatttaaagacACGCAATTNgataaaagatcgatgata
gatcgataactaatcataagcttgaaaaaatcttgagtatcgatcctcta
tcgatctcctatccggatcgttaagtaatccatccatcacatatcgatcc
gtcatcgagccattccgatgatcgatcctatcacAAGTATCACAAGTGTT
ACgcacgcgtaagccaaatcgggAATTACGAACTACCTCTAAATTGAcaa
gtacaggagaaaaaaaatcaaaattcaaaatggcggccaagcccacgctg
ataactataaaaaatcttcgtttttcaatcagctattgcagctcaattaa
tcaatgaaataatttgaattaaaaagctggccattccagaaaatttttgt
taccccccgtcggacgacgtgcattttaaaatttttcctagtcagaaagt
ctgccgtatactatcttcgcttttttgatttgatttgattgatagCGCTG
CGATAGAACTACTTTTCCACCATCAGATTttcaaaggcaaaaagtagttg
agctccagctcctggactaAATTTTTCCTAGtctcggaaataatttttct
tttccagttatggtcggaaattccgataaaaatccatgtacttttgcaaa
atgcatcagaaattccactcttttttaccttttttaattcaattgcctta
gaaattcatacattttcttctatCGCANCGACAAagtgcacccgactgtc
gggtgttaaaatttctaacttcgagcacccgacaacagcacccgactgtc
gggtgcaccggcagggtcgtaGAAGTGTGCACTTTTTAACTTTATTTATA
GTTTTATTGTTCGATTCCCATTCATTAGAGTCCcttgcccagttggcgac
cgctCTAGCTGGCAACCAAttgtctttgaacccagaaagtacaaaaacaa
acctctgaagaatttcttttgacttAGTTATGTACCGTGACCTATCAGTA
TAGACCaggtccgcgctcgataggatcgatcatcggaacggctcgatggt
ggatcgatatgtgatcgatggattacttaacgatccggatgggAGATCAA
TGGAAgattcaagactttttaatggctacattaaaaagtcttgagtatcg
atccttcgttggaTCCATTAAtcaagctagtatttcaatcaagtatatcg
attcgtcatcgatcgttaattNgaacctttcatgaatcgaaataaataaa
agtatttatctaaagtgaagattacatttcaaaataaaacgatttccaaa
ccaacctaaagtcattgtctgccaactaaaaatttctctgcagGGTCACT
GGTAttaaggagttacgacttcagactttagattccaattcttgtatagg
ctgcaactacactgccaaatgatctgtattacaaatacttccaaatgggt
ccataagttacgaaaatgaaattatcatctagcacgggggttttgttttt
aaaaacaaacttcaaaataaaattatcaCTTACTTATATAATCCATTTGA
TGCTGGTCAAAAATGGAGGGGggtatttgtgacatttttgttgAGGTTTT
TCATTTAGCCCCATAAAATGTGCTAAGTTTGAGGTTGACAACTGAAACTT
TAGTATGGTTAGGCTGAATAATTTTGCTTTCTAGACATATAAGTATCTTT
TATGAGGTTTACTTGAGATATGCTATTTTGAAGTAGGAGCCAAAGTTTAG
GTTAACACGGCCTGAGGTTGACACTATTAGGGTTCTTTGACTCCCTGTAA
GTTGACTTTTGAATCAGATTTTGGATATGTTAAAGCTCTGAAATTATCTC
AAAGGATTGAAAATTGCTCTGAAGGGTGTTATTTGAGGTTGACATTTATT
GAATGGCTCCAATTAGTTTTGTTGCATAAATGAATCAGGGAGTCAAAAAA
GGGATCGAGGAGCAAAAAGGGACCAAGGAGTGAATCAGGAACAAAAGAAA
TGGCAAAAAGGGATCAAGGAGGGAAAAAAAGATTAGGGATAAAAAGGGAT
CAGGGAGCAAAAAGCGGGAAGGAGCAAGGACTTGATGAACTACTCTGTAT
ATTAAGGCAGTatatagacttaaactccttTATCAATGATATTATGGGAT
TTGGAGTGCAAaccgattttactttcattttcagtagtttcattttttat
ctcaagccaacatcttagcaacggggtgattgcccatagttacaggagTT
TTGATAATCTTTGACAATCTCACtaaattatttgaattttttaaattttt
acaatcAAGTCCACATTAGGAAATGTATGAATCATTCAGCTGGCCAGAAT
CTTCAGAATACCCTGCAagattttgctttattttttttggataaaGAAGT
CAGTTtcaaatacaaaggaatcttgaTTCTGGATAGATAAGTTTTTCCCA
TtacatgtttacaaaaatttgaaaacgggCTCAAAGATGCTTGGTTTGAG
GGCTTGACAAGACTGAAAAATGCTTATAAGGATGCGTAAATCCCAAgcaa
aattttaggaaaattccAACAAATTCTGATCCACACTAGACCGTTCCCGT
TgtcataaaatttagtaaatACTGCTTGCGCTTGGAATAAATCACTTTAT
TTGAcaaggaagattttagtcagGGGATTGAGAAGTGTTGAATGCCCTTC
ATCCTGGAAACCTAGTGTTAACTCCCCAGGTAGTTTACAATAAGCTCTCT
ACCGTCAAGAATAACATACAAAATAAGTGAGCAAGCAGTCGAAGAGACTa
cttcgtttttgttgcagcaTTGAATTGTTGTTAAGGGAAAAAGAGAAGTA
AGTCTaacctagtttctaatcctggtNCCCTAATATGATATTTTACAGAt
aataaataaacaataaaatatataaagacGATGGCACAGTCACATGGAAG
CAATGGAGCAGACCAACAGCAAACTGCAGCAGTTGTTTGGTTGATTGTTG
CTTTGGTCATTGGAATTGTTCTTTATCTATCCTACTTCTTTTCAAGTCaa
gggaaaaagaaaaaagaaagtaagTCAACCTCTACCCTATAGCGCACTTT
CTAATATGCCCTTTACGTTGCGTTGGGGTTGTTCATTAGAGCTTATGACT
TTAGTTTGAATTGAATATTTGTTTTGGAGGACGCAAcggcctattgaata
actaattattcCACAACTGTtacagttacctagagacaagatcatttatc
acgtttttattggccgagggaaagtaatgtatgtggagtaatttgttatt
caataggctgtagcattctccaaaacaactatcaTAGAGGTTATTAGTAT
GGCTTTCGTAAAATGTATCATTAATCAACCacttttttgattgattttac
taGAAAAGACACCAGTTCCTGCAAGACCAAATGAGGCATCTCAAGGACCG
GCAGTTGTTGGGCCAAGTGGGCGCCGGAGAGGTCCAAGAATGAGAGTTCA
AAGGAGAGATGAACCTGAACCTGATGATAATTTTGgtaaaagaaattgaa
tttgattGAATTACTATAATCATTATACTATCATTGGGGATAgaattttg
tttagaaataacTGTTTGTATTTCTTTCTCTCTCTCCCTTGTTATCTTTC
AATGTTTCCTTCTTTACAGGAGACTTTGGAGGAGAAAGCGATAACGAAGT
AATAGATGCATCAGGAGAAGGTGGAGGGAAAATTGGTGCCAAGAAACGCG
CAAAGATGATTGCCAAAGCTGAGAAGAAAGCCGAACGAGAGGTTTGGAGC
CTTCGAATGAGTTTTTTGTTGCTTCTAACGCATTCTCTCCTTCATTGATG
GCTCTTTCTCTGAAGTCTTGACTCTCTACGCAATTACTACAAAATTAATG
TTAGGTCAGAGAAAAAACTTGAATATGTTTTTCCCTTTGAACTCGCACGA
CTTTCTttaaacaacgctttttttcaTTGCAGGCGTTGGAAGAAGAAAGA
GCAGAACGAAAAAAACAAGAAGCACTTTtagagaaagaaagagaaaaaga
tgcAAAACAAAGAGAAGCTGAGGAACTAGCCAAGGTTTGAACAAAAAACT
TGCTACTgatatttatgaaaataatattGATCTAAGTcatgataaactta
aattttattatcTTCTCAGACATCGTCGAAAAAACCTGcatccattcatt
cattcattcgtcCATCCATTCTTTGTTCTTGTAGGAAGAAGAGCTTcgcc
ttttgaaagaaaagaaagaaaaagaggaATATGAAGAATATTTGAAACTG
AAAGAATCTTTCATCATCGAAGAATCTGGCGAAATTGGAGTGCTATCCGA
GGAAGAGGTAAAGTCCTCTCTTGTGAACTTCGGTCTTATCAAACTTAACA
ACATCTTAAGAAAATACCAGAGTACAAAGTACAATTGTATAGTGAAGCAT
AATGTttgaaatttactcaaatataccttTTAATTTATCTTTTAGAGTCA
AGCCTTGCTACAAGAATTCATCGATTTCATAAAGGTACGGGTGTCTACCA
TGGACAGTTTTTTTTAGCGTCAGCTTTAATTTGATCTTAGGTGCTTGTGT
AAAGCTCTTTCCAATCAGAATAaacaatataacagtttttggAGAATTCC
TAGAAGTAGccctcgaaatattttttttgcccTCAACTTTCAGGATTTAA
TGTTTGCTTACAGCAAATATATACAACTTccatatttttctcttcttgtA
GGGGGCCAAGGTTGTACAACTAGAGGATTTAGCTTTGAAATTCAACTTAA
AAACACAAGAAGTTATTGAAAGATTGGAAAACCTTCAAGAAGCAGGACGG
ATAACAGGTATGTACCAACGAGCGTGGacccttttctttttcagggaATA
AAGCCCtcacaaaatttacaaaaacggAGAATTTAAATGAAACCTTTTAA
AGAAGTAAGCAACCACAGGGGCATATTTATGAGATGAGCtcgagttttta
caagatacttcactaattggtcatttgaagtggtagagatgacgcgttct
ttagaaaaagtagcaaaattgttttatcactggttaacgaccaaccaaat
caaataagagttTGTCCCATATTTATATGGAGGGCAGGGGTAGGGATTTT
GAAATGAGAAAATGTACATTATATCAAAGCTTTTCTTGCTTACTGTGAGT
TTTTTTCAAGAAGAAAGAATTAGGTGGTTTTTGGGATGATCGACTCATCT
TCTTGTAATTTATTTTCTTGCAGGGGTGATGGACGATCGTGGgaagttta
ttttcatttctgaaGAAGAGCTGAAAGCCGTCGCGAAATTCATCAAACAG
CGTGGTCGAATTTCTATCGCTGAACTCGCCGAATCTTCCAATACCCTCAT
CACGTTACAGGagaaagaaaattcgaaatCTGTTATTCAAACCTCTGCTT
AATGGAGAGAATTTTTAGAGACCTTTTTTAAATGAATGGTGTTGGCCTTT
TTGTAAATAGAATTTTATCTTGatattatttatttcttttttggaataaa
ttatgcaatcaatcaaatt
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00070870TCONS_00070870Clytia hemisphaericatranscript
TCONS_00070871TCONS_00070871Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00070870-proteinTCONS_00070870-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_58supercontigscaffold_58:1092205..1099673 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
77.42	69.53	56.51	61.65	55.66	45.79	101.12	102.84	54.66	56.27	43.09	37.96	26.38	25.6	35.63	39.17	41.93	38.57	18.87	25.17	25.02	28.94	54.04	48.4	40.03	39.1	22.08	18.58	50.73	44.01