XLOC_043976 (gene) - C. hemisphaerica

Overview
NameXLOC_043976
Unique NameXLOC_043976
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_57:510146..519271-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043976 ID=XLOC_043976|Name=XLOC_043976|organism=Clytia hemisphaerica|type=gene|length=9126bp|location=Sequence derived from alignment at scaffold_57:510146..519271- (Clytia hemisphaerica)
TTGAGAAAATGGAAACATTTAAAATAAATCACTGATTTGGTTAATGAAAT AACAAATCTTAATTATTTTTTTTGAGACCGCGTTTACTTTTGATTTATCG GAGATCAGAAATTTGGTAAATTTTATTGAATTCACCTTGGACGTTTTGAT TTTGCGGTAAGTTATTTATTGATCTTTTTAGTTGACACTCTATGGTTCGA AATTCGTGGGGAAGTGAATTTTGATTAGATACGGAAACGTATTGAATATT AGAGCGTCGTTTATGAATGTTTCTTGTTGACGTTGACTTTTAATATTATT GAACAATACACCCCTGTTTCACAGCCTCGGTGGAACTTCTTATCACAGTG GCGATGAACATTATCATCGAAATTCCTAATGGGGATATAAATTCTTTTGT TCTCGTGTCAAAAGAAGCAGTGGAGATGGTTTTGGTTAAGAACATTTAAA GGCTTCTTAAGAAAATGGGCAAAAATACTCATAAAATGGGGGAAAATAAG AACATGTTAAGAACATTTTTAGGCTTGAAACTCGAAAAATTAAGAACATC CAAAGGCTTCAAAAACTTTTGATGTTCTTATAAAAAAGCGTGTAGACCAA GATCAATTTAATTCTAGTAAACCCTCAAGATTTATAGCATCTTTTGCGAA ACACAATCGCATGTGACTGGTTCGAAAGTAGATAGGATTTATTTGAGACC GAGAATAAGGACTGGCAAAAGTTTTTATGGCCAAAGAACTGACCTTGGTA GGCAAAAACCTTAATTCCAAAAATGAGTAAAAAATTTACGATTTTTCAAA GTCAAATTAAACGAAAATGAATCATAACATCGGATAGAGCATGAAAAGGT ATACTACGACAAGTCTTATACTTAAAATTCATACAGGGTGTCCCTAATTA AAGTATCGAGTTTGAACATACGATTGAGTAGAAAAGTTTGTGTGTGTTAT CGCTAAAATATAAGAACGTTCTCCATCACACAGGNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNAAGAGGGAGAGCTTAAAATACAATTTTGTGAACACGCA CATAAAACTTTCTACTCAATCGCATGTTCAAACTCGATACTTTAATTAGG GACACCCTGTATCAAGATCATCAAGAAAAAAACAACTACTGCGTTTTCTC ATAGAGGTATAAAGAAAGATATACCTCCATGGTTTTCTTCAGTACTCTGT GTTTCATGTTTTTACACGACAATCATCAGCTGCTAAATTGAAAAAGAATT TATTAAAGTCTATTCACGATAAGTGTGCACTCTTTTTTCATTTACCTATA ACTTTTGAAGGAATTCTTCAATTTTTATANNGAAATTAAAAAATCTTTAA AAAAATTATAAAAATGAAGATGAAAATAAAGAAGAAAAAAATGAAGATCT TGTAGAAAGGTGATATGACTTTCATTTTCACAAGTTGTCAGTTGCATTGA GAAAAATAATTATTCAAAACAATAACTAATCTTTTGATTTGTAATTAGCT AAAAAAAATTTATTCCCACTTGCTCAAAATGTCAGAACGTTTGTGTAGAA GTTCCGTTTTGACGGAATAAAGCTCTGATTAGCTGAAAACTACACACATA AACAATTTTTTTTCTCAAAAAAAAACCTTGAAAATTTTGTAAATCTTGCG TGTCTCAGCCAATCAGATTTTTACTCGACGCTTTTTCGTGACTTTTTTTA CAAGAATCTGCTAATAGGAAATTCGTGTTATCAATTCTAATAAATTCAAA AATTACTTTATTTACTACCAGGTTGTGTTTTTTGGACTGAATGAGCAGCA TTACAAAATCTAGATGAATGTTTCCCAAAGTGGAAAATGTTTTTCATCGT AAAACGAAGAATACTCGACGAAAAAGAAGAATGGTTTATGCAATTGGTGT TATTTGGAGTTTGATTGGAATAACTAGTTTATTGTTGTTAGATCCATTCA CATTCACTGCTGTAGTTGCTGCATTTAGTGGTAAGGGTTGGTATTCACTT TAACAATTTATTTTCATAATGATTTAGCCTGGGAATCCAAGCTCATACAA TTTTAGAAAAAACAAAAAATACCTCACCTCACAATGTTCTAAAATTATAG AGCTTGGTGCAGGTAGATAGTCTGACTGAGAATGTTATAAACAGTCTGTG TATGAACCCTTGTTGACAGACTTTCTGAACTTTGGAAACCCAGGCAAACA CACTTAATCAACTTACCATAAAAACTCTTTCAAAAGCTCTAAAGACTTTC AAAACTATTAAAAACCACATCAAAACATCAGCCACATGTATTTAGACACC AGCCAACAGCCATTTTGTTTTGAAATCCCGGGGGGGCACTCAAGGTAAAT GACCTAACANTCCCTGCAGGCGAGTTACCTGCACCAAGCGTTAAACCAGC AGCAAAAATATCATAAACTAGACTGTGAAAAAAGTTTAACGCTTGGATTC CCAGGCTAATAATGATTCTACTGTATGACGACAGTTCTAATCAGGAATCC TTTGTAAAAAACCGCATGTCATTATCATTGCACTATACTTTAATGATTTG CTTTTATAATCNAAGGGTAGGAAATTACAAGACTGCACTGAACTGCACTG TAAGGGTAGGAAATTGTGATAAAAGGCCAATTTTTTGGTAAAATTGGCAC AAAATGGGTNGTAAAAAACCGCATGTCATTATCATTGCACTATACTTTAA TGATTTGCTTTTATAATTATTTTACAAACTTCAACTTTGATCATTTGTTT GCTTACTGTTTCTACCGATGTTCGATTGTAAGGTCTGGTATACATATTCA TGATATTTGTAGCGAAAGTGGATTTTCAATGAGTAAAATTTTAAAGTAAA TGTCAGCCTACTCTAGCTAAGGTTAAGGCTAAGGTCCTAGAGACCTTTTT TCTCAGATATAAAGGAGTTTCAAATTATTCCTTCGAACGAACTTCAGCTT TAAAAAATTATCTACTTTTTTTCGTTTTTTGCAGATGTCCACATATCAGC AGCTCAACCTATTCCATGTAAAATCATTCGAAAACAATTTACTGAAGGCG TTATTCAGTTACCACAGTACCTTCAACAAATCAAAAGTTGCAAAGAAAGT AAGTTTTATGCATTGTGAATTACATCCTCCTTTCACAGACTAGCTAAAAC CTGTGCCCCATTTGAAAATTTGAACAAATCTCATACCCGGTGGAAAGAAT ACCCTACAATTTCACCCACTTGGAAATTGACTTTGATTTCATCCCCATTT GAAATTCGATGACAAAAATTGTAATCCAAAACCATCCTCACTGGATTTTC TGAGCTGGAAACAATATAATTTCTATCCCCAATTTGGATTTTGATAGACT TTTTCATCCCCGCTGTAGGAAAAAGTTCCACTTGGGCTGTGAGACAGGAG TGTTGACCTGTGTACCCCCTTTTATACGAGCTCAACCTTCACTTGTAAAT TTTTTGAGAATCCCTCAAAATGGAGCTCAGTCCCTTAGTTCACTTTTTTA TGATAATATCCGTTAGATTAACGGTGAAGGAAAGCTTTTATTACATCCCC TTCTTACAGACCCAATGAGACCCCTTCCCACTAGAAATATTGACCAAAAT ATCATCCCAAATAGAAAATAAGACTCAAATTGTCTCTGCTGAATATAATG TAATAAACAAATCCTAATTGCAAAATATTGTGCTATTTTTCTATTTCCAT TGAATTTTCCGGCTTAAAAACAATGAAATTGGAAACCCCAGCCATAATAA CTGCACCAAATTCCATTCTGTTTTTACTACCCCAACAGGAAAATTCTACC AGGTCTGTAAAAGGGCTGTACTTTTTTGGATAGGGTTCTCAGCGAATCAT ATTTTCATTTTTGTTTTGCTTCTTATGTAGTACCTTCTTTGAAACGACAA ATACCAAAACAGAAAGACACGACGACACGACAGCTACGACAACTCCCGAC AAACAACCGGCCTCTCTTACCATGGCAACAACTNATAATGATTCTACTGT ATGACGACAGTTCTAATCAGGAATCCTTTGTAAAAAACCGCATGTCATTA TCATTGCACTATACTTTAATGATTTGCTTTTATAATTATTTTACAAACTT CAACTTTGATCATTTGTTTGCTTACTGTTTCTACCGATGTTCGATTGTAA GGTCTGGTATACATATTCATGATATTTGTAGCGAAAGTGGATTTTCAATG AGTAAAATTTTAAAGTAAATGTCAGCCTACTCTAGCTAAGGTTAAGGCTA AGGTCCTAGAGACCTTTTTTCTCAGATATAAAGGAGTTTCAAATTATTCC TTCGAACGAACTTCAGCTTTTAAAAATTATCTACTTTTTTTCGTTTTTTG CAGATGTCCACATATCAGCAGCTCAACCTATTCCATGTAAAATCATTCGA AAACAATTTACTGAAGGCGTTATTCAGTTACCACAGTACCTTCAACAAAT CAAAAGTTGCAAAGAAAGTAAGTTTTATGCATTGTGAATTACATCCTCCT TTCACAGACTAGCTAAAACCTGTGCCCCATTTGAAAATTTGAACAAATCT CATACCCGGTGGAAAGAATACCCTACAATTTCACCCACTTGGAAATTGAC TTTGATTTCATCCCCATTTGAAATTCGATGACAAAAATTGTAATCCAAAA CCATCCTCACTGGATTTTCTGAGCTGGAAACAATATAATTTCTATCCCCA ATTTGGATTTTGATAGACATTATCATCCCCGCTGTAGGAAAAAGTTCCAC TTGGGCTGTGAGACAGGAGTGTTGACCTGTGTACCCCCTTTTATACGAGC TCAACCTTCACTTGTAAATTTTTTGAGAATCCCTCAAAATGGAGCTCAGT CCCTTAGTTCACTTTTTTATGATAATATCCGTTAGATTAACGGTGAAGGA AAGCTTTTATTACATCCCCTTCTTACAGACCCAATGAGACCCCTTCCCAC TAGAAATATTGACCAAAATATCATCCCAAATAGAAAATAAGACTCAAATT GTCTCTGCTGAATATAATGTAATAAACAAATCCTAATTGCAAAATATTGT GCTATTTTTCTATTTCCATTGAATTTTCCGGCTTAAAAACAATGAAATTG GAAACCCCAGCCATAATAACTGCACCAAATTCCATTCTGTTTTTACTACC CCAACAGGAAAATTCTACCAGGTCTGTAAAAGGGCTGTGCTTTTTTGGAT AGGGTTCTCAGCGAATTATATTTTCATTTTTGTTTTGCTTCTTATGTAGT ACCTTCTTTGAAACGACAAATACCAAAACAGAAAGACACGACGACACGAC AGCTACGACAACTCCCGACAAACAACCGGCCTCTCTTACCATGGCAACAA CTTTACAACGAATTATTACAACGGAAACGACAACAGACCGATCAACAGCG ACAACGATCGTTGATTGAACAAGAAAATTTACAGAAACAATTTTTACAAC ATACCACACAACCTATGGTACAACAGAGTGGACTTTATAAACCACAACAA CTGGATAAAACTGAACATAAAAAGCAATCGTTAACAGAAAATTTCGTCTT TAAGCGTCAGAAACAGCAACAACAGCCACAACAAAGACGACTGAATAGAC GACAGTTCACACAACCTATACAACCACCAACATTTACATTATTACCAACC CAGAAACAAAGACAGGACTTACAACAGAAAGAACTTATACGACGTACACA ACAGCAATTTGCGTACATGAAATGGTTTACAGCTTTAAAAGAACACCAAC AACAGTTACTACATCAACAACAGCCTGCGATTAAGCGAAAACAAGACAAG ATACAACCAACAACATCATACATTACACAGGCGTTGGGCTACAATCCAAA GTCGCCATTCACTAATTACCCACTCTCACCAGGAAGAGGGAAAGTTACGA ACCAGTTTGCTTTCAAAACTCAGCAGCAAAAGGCAGCAAAGATTACGACA AAAGCTACAAAAATGCCACCGAAAACTGACTGGAAAATTTTGAAAATACC AAAAGGGCTTCTTCAGTTGAAAAACAAAAACAAACCTATTAAAGCAAGAG AAAATAATAAAGCTCATGAGAAACTTGTCTTTAAAATACAAAGCCATCCT TCTAAGACAAAATCTGTAGTCCGACCACTAAAGAACGCTGAAAAAATCTT AAAAGTCATGCACCAAAAATCACCTAATAAACAACACACTCCATATATTG CTGCAGTAAAAATCCGGCAAAAACTACAGCCAAAACAAATAACAAACAGT AAAGTGACACTCGTTGAAAATAAGATATCACCAAAGATATCACCGAAAAA ATCCAATAAAATGTTGAATGATGGTGAGAGATCACTAGGGAAAGGAATGG AGGATGAAAAATCAAAAACCCAATTACAAGATTTACTAAAAACAATCAAA ATAAGCGATTTTCAAAAATTACATGGGAAAACGCACCAAATCAAATCAAA TAAATCAAAGCCTTTAAATACACCTTTACTAACCAAGGACAGTCAATCAC GAAAAGGTAAACCAGACGTCGTAACTGTAGCTAAAACAAAGTCCCCAACA ATTACTCAAATAGAGACAACAACAACAACAATGACAACAGCAAACCAGGA ACTACAAACGACACCTGCCAACAATCAGCCATCAAAGAATGACAACAAAA TCCCTCCTCCAGAGATCAAAACAAACACTGAACTCGAGCAAGCGTTACAG AACTTACTATCAACCGACACACAACAGAACATAAACAGTTATTACCCAAA TTATGCTTCACCATACTACGACCAAAATGCAGTACAAACACAACCCAATT TCTACATTCCACCTTCCACCTATCCATGGTGGCAACAACCTTATAGAGAA TATGGTAGAAGTGTTATCCAAGACTTACCAGGAGCTTTTAATCCACATAT GACTTCTTTTCCATCTTTCAGCCAGCATATAGATGATTCAAGGGTCCGGA AAACATTTGTTGATGAGGAAGCTAAAATTGCGGAGAGTGAGGATGGTATA CGTTCGTTTTTAAGTAAACACAAAAGTGATACCTCATTGTTCCAGAATGA AGTGGAGGCAAAGGACGATATTTTACCTTCTGAAGGAGGACCTGGTAGTC CTGAAAACGGACATTTATTAACTTTGAAAGACTATGAAGCATTTATTGCG CACCCTACGAATTCCTCTTTAAAGTCTATCGAGAATTCGCCTGAAGTGGA GCTTCAGGAGCCTGGGGAGACTCGAACAATGGATAATATAGTCAACGGTG ACGATGATGATGAGGTTATCGCAGAGGCTAAATTAATCAAGGAACAGAGT CTAGCCAAAGCAGCCATTCAATCAGATAACGGGCGACGTAAGGATGTGTT AAGAGAACAAGAATCATTACGGAAACTTGAGCATGATAAATTGATTGAGA GATACGGTCATCCACCTGCCAACCCCATGGAATATCTAGCACAAGTCTTT CAAGAGTTGGATGATGATACGAAAAACTTGGAAACAGCGAATGCAATAAA GAAAGAGGACATTCAAAATGGCAGCAAAGCTGCCTCTGGTATTGATAATC GTAAAGTGGCTCAATCACCCTCTGAGCCTATCTTAGGCGAAACAAAATCG ACTTTAGAACTCAAATCAAGTGATAATCAAACTTCTAAAACACTTAATAT AAATTCAACAGATTCTGGCGTAAATGATGCAAATCAGACTTTATCAAGAA ACGGCGCTTCATTAAAAGGTGTCGATCCTTTAACTGTCAAAAATGATGAT TCATCTTTACTAGATTCTGTTTTTGAAAAAATCAACGTTCAAAAAGATAA TAGTACAACCAAGGTTAAGCGATCCCCGATCATTGATGCTGACCTTGAAC CGTGGACGAACAGACATAAATATAACCAACCTATAAATATACCAAACTCT GATAAAGCAAGTTTGACCAGTACAAAGTTTCCATTAGGAGATATAGCTGA TATAGCACAGCAGGTCAATAAAAGAAGCGATATTCCCAAAGCTTGGACAG CAGATGATGGTGTTTCTATGGGAGCAAACACAGACCATTCTAGACTAACA TATTCGGAGGTTAAAAGACTTTTTACAGATATTGAATCAAATAAGAAAGG ATCTTTATGGAAGCTCTCTGTCACTAAAAGATCAAATGGTTTGAAAGGAG AGACAAATGCGAAATTATTGGTCAACGAAGGGAATGCTGATGGATTTTTA AGATAGTCGAAAATCTTGATAATAAAGTAAAGTCTCGAACCACTATAACT CGAATGTCTCCTTAACTAGAACACGTTCTTTTGTCCATTCAGTTAATAAT ATCTTAGAAACCTTACTCCATATCTCGAAATTTCCATAACTCGAACAAAT TTGTATTCCTTGTGCGTGTTCGAGTTATGGAGACTCAACTGTATCGTTAT TGAACATGTTATGTGAACATCCTGTGACTTTAATTCTTTGGTTAAATGGT CAAGAAGGGTTTTTGCCAAGTCTGTACCAAACCGATTTTCACATCAGCTC TAATGTTTTCCAAGTGAACAACTTTTTAACAATTATTTCATAATTTTCTA AAGATTTCGTTGGTCATTGACTTATCCACACCTAAATTGTACAAAAATGA ATTTTTGCTTCGGAATTTCACTATTATAAAGTTTTTTTCCCCTTTTTTGG AATTCATACATGAAAAATCAAATTAGTCAAAAAGAGGAACAAAACCTAAA AAATCGGTATCGGAATAGTATTTCTTACGGAATCTCGGAAATTTTAGCAA AATTATTCGGTATTTCGGAAATCGCAAACTCCATACGCCCCCTCCCCCTT CTAAGGTTGTCGTGGTGATCATTTCGCTTAATTTCAGGATTTTTATACCT TAAATACTGCAGATGGGGAAAAGAGGGAACAAATTTGGCGATTCAACCAA ATTAGTTGTCATTAAAATACAGTTGCCTCTCTCTAATTTGATCTTTAAAG GATTACAACTTTGCTTCGAATTTTAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00070691TCONS_00070691Clytia hemisphaericatranscript
TCONS_00070690TCONS_00070690Clytia hemisphaericatranscript
TCONS_00070689TCONS_00070689Clytia hemisphaericatranscript
TCONS_00070688TCONS_00070688Clytia hemisphaericatranscript
TCONS_00070687TCONS_00070687Clytia hemisphaericatranscript
TCONS_00070686TCONS_00070686Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00070690-proteinTCONS_00070690-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_57supercontigscaffold_57:510146..519271 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.03 0.03 0 0.05 1.18 0.66 5.2 5.91 0.72 0.94 2.53 1.81 4.33 3.47 2.62 7.11 2.04 2.55 0.08 0.05 1.56 2.07 1.25 1.27 2.11 2.63 0.52 0.37 0.11 0.07