XLOC_043972 (gene) - C. hemisphaerica

Overview
NameXLOC_043972
Unique NameXLOC_043972
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_57:422592..426354-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043972 ID=XLOC_043972|Name=XLOC_043972|organism=Clytia hemisphaerica|type=gene|length=3763bp|location=Sequence derived from alignment at scaffold_57:422592..426354- (Clytia hemisphaerica)
GTAGTGTAGACATGTCATATATTATCTGCAGAGAAGAGTAAACAATTTTC ACTGAATTTGATAGTAGTAAATTTAACTGGAAATAAATTAATCCTTTTTT TAAGTGAGAATAAAACAAAAAAAATATGGATTGAATTAAAACAATAATTT GAGTAAAATCAACTTTTGTCATGGCTAACCCTAAAAGACCAATAGGGACT GCAAGCCCTAACACCATCAATGCAGTTGTGCCTATGTGTACAAACCAAAG TAGCTCATCAAAGCATGGTAGTTCTAGTCCAAACAACCCTGATTTGGCAT CATTATTTGAATGTCCAGTTTGTTTTGATTATGTTTTACCGCCAATTTTC CAATGTAGCAGTGGGCATTTAGTATGTTCAAATTGTCGGCCAAAATTGGC AGGAATCTGTCCAACATGTAGAGGACCTTTAGGGAGTATTCGTAATTTGG CAATGGAAAAAGTTGCAAATACTGTTTTGTTTCCATGCCGTTATGCAAAT AATGGATGTATTGTTGCTTTACCGCATACACAGAAAAGTGAACACGAAGA AGGATGTGAGTTTCGTCCTTATGCTTGTCCTTGTCCTGGAGCATCATGCA AATGGCAAGGTTCTTTAGATGCAGTCATGCCTCATTTAGTACATGCGCAC AAGTCAATAACAACATTACAGGGTGAAGATATTGTATTTTTAGCGACAGA CATTAATTTACCAGGTGCGGTTGATTGGGTTATGATGCAATCATGTTTTG GCCATCACTTCATGTTGGTCCTGGAAAAACAAGAACGATTTGAAGGACAT CAACAATTTTTTGCTGTGGTTCAACTGATAGGGAGCCGAAAACAAGCTGA AAATTTTGCTTACAGACTTGAATTGAATGGCCGTCGAAGGAGGCTTGCAT GGGAAGCTACCCCAAGAAGCATCCATGATGGGATCCAATCAGCAATCATT AATAGTGATTGCCTGGTGTTTGATACCAGCATTGCTCAATTATTTGCTGA AGCTGGTAATCTTGGCATTAATGTGACTATCTCAATGTGTTGAGATGAAC TAGTGTAGTTAGATTATGCATTTGAAAACAAAGAAGTGGATATGATGAAT TAAACTGGGGTAATAAATTCATATTCAATTCATGAATGCTGGTTTATATG AAAAGTTTTTATAATTTTGAGAGGTATCATGAAACATGTTTTACTGCAGC TTGTTTACTTCAACCTGTTAGAAAATCTTACAGCGCCAACTTTTTTAGAT TATTTTTACAGAATTTCGCTTCTATTTTATGGAACAGCTTCCTTGGTTAT TCCTTTTTAACATTTTCATCTTTGGTCTAGCTTTTATCAATGTACGAATC AGCCTTTTAAATTTCAAATAAAAAAGGTTTTTTTAATCTAGGNGGGAGTA TTCGTAATTTGGCAATGGAAAAAGTTGCAAATACTGTTTTGTTTCCATGC CGTTATGCAAATAATGGATGTATTGTTGCTTTACCACATACACAGAAAAG TGAACACGAAGAAGGGTGTGAGTTTCGTCCTTATGCTTGTCCTTGTCCTG GAGCATCATGCAAATGGCAAGGTTCTTTAGATGCAGTCATGCCTCATTTA GTACATGCGCACAAGTCAATAACAACATTACAGGGTGAAGATATTGTATT TTTAGCGACAGACATTAATTTACCAGGTGCGGTTGATTGGGTTATGATGC AATCATGTTTTGGCCATCACTTCATGTTGGTCCTGGAAAAACAAGAACGA TTTGAAGGACATCAACAATTTTTTGCTGTGGTTCAACTGATAGGGAGCCG AAAACAAGCTGAAAATTTTGCTTACAGACTTGAATTGAATGGCCGTCGAA GGAGGCTTGCATGGGAAGCTACCCCAAGAAGCATCCATGATGGGATCCAA TCAGCAATCATTAATAGTGATTGCCTGGTGTTTGATACCAGCATTGCTCA ATTATTTGCTGAAGCTGGTAATCTTGGCATTAATGTGACTATCTCAATGT GTTGAGATGAACTAGTGTAGTTAGATTATGCATTTGAAAACAAAGAAGTG GATATGATGAACTAAACTGGGGTAATAAATTCATATTCAATTCATGAATG CTGGTTTATATGAAAAGTTTTTATAATTTTGAGAGGTATCATGAAACATG TTTTACTGCAGCTTGTTTACTTCAACCTGTTAGAAAATCTTACAGCGCCA ACTTTTTTAGATTATTTTTACAGAATTTCGCTTCTATTTTATGGAATAGC TTCCTTGGTTATTCCTTTTTAACATTTTCATCTTTGGTCTAGCTTTTATC AATGTACGAATCAGCCTTTTAAATTTCAAATTGAAAAGGTTTTTTTAATC TAGATGGAAAAATTCACATTTTTACATGAAATGATTTGTTCTTTGCAAAA TGTTTTGGTTCAATGAAAGTTTCGATGATTTTGCATTTGAATACACCTAT AAACCCTTAAAGCCTAAGGAGACTTTAGAGTTTCACAGGCGGTACGAACT TCAAAGCTCTTTGATGATGAGTAAATATCAATGCACAGCTTTAAGGGGTA ATTAATCTCACAAGAGATCATCCATTCTGCACATACCACGCTCTGCTCCA AAGGACTAAGGTGAATTTGGCAATCTGACTTGGTGTTTCAGAAAAGCGAA ACTATCAAAATGGCAATACCTTTGCTTGAAGGAGAAAGCGACTGGGTCCT AATGCGATTGGTTTAAAGTTCAAAGTGGTGCGCCAACCTGAGCAGATTCT TTTACTGAGCCATGGCCTTTAGAGTAAATACCTGCCATGCGCGGAGTATA AGAATTTATTCGTAGATTAAGAGTTGATAGGTGTATTAGAACTAACTTGA TCACTGAGATTGTTTACTTTTATCATGTATGTTAAGGTCTGGTAAGGAAT CTATTCTTGTACATATTTATTTTGAAATTATACATTTTTAGCAGTTTTTT TCTTGTTCCTTTGATAGATTTGATACTTAGTTTTTTTTCAGTTCCAGGTG CTTTGTTTGGTATTATTTTTCCCATGATATTTTGAAATTTCATTATTCAA GACATTTTTAAAATAGTTACATAGCTACTCTTCAAGCATTTCGGGGGCGA AAATATTTATCCAATTGGCTTAAAAGCTTGCAAGTCTGCACCAAATTTGA ACTATTTGAGTCTTTGATACTTTGTAAATGCCAAAAATAGGACCCCCACT ATTTTTTTGGTAAAATATGGACCGGTTTTTAAAATACCAACTACGTGACC AAACTAAAAATTTGCCTTAAATGGTCAATATCCTGTCACTGGTGAAAATT TCAAGTCAAAGGCTCCTGTAGTTCCTAAGTGCCTGCAGGGTTGACGTGTA TTTTACTGACCAGTCTGCAAAATACCAAATACTTAAGTGACTGACAAACC AGCCTTCAAAACTAATTTCAATCAAATCAAACAAGTCGATCGGTCAATCG GTGCAGGCACAACGCACCGGGTACGGCAGGTACGGCGGCCGTCGGGAGAG CTTTCACGAATCCAATTATAGAAATGACTTAATATTGTTATTTTGGTCAT TTTTTTGTGTTTTTATGACTGTTATATATAATATGATAAACAAGAAACAA TATGAAGATGGCTTTTTTTAAGTTATTGATTTTTTATACATGTACAATGT GCAATTTATTAGTTTCGTCCATACCTTGTTTATTATATTAGTTTTACAAA AAATCTGAATATTTGAATGAAAAATAATACAAAAATACATTGTGTTGACT AAATTTCTATTTC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00070680TCONS_00070680Clytia hemisphaericatranscript
TCONS_00070679TCONS_00070679Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00070679-proteinTCONS_00070679-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_57supercontigscaffold_57:422592..426354 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
SIAH1E3 ubiquitin-protein ligase SIAH1 isoform b Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.36 3.19 6.51 8.27 19.27 14.46 16.97 18.77 11.54 15.36 11.32 9.95 8.72 7.79 7.59 8.48 10.24 10.99 6.54 8.09 8.65 9.77 9.27 9.99 9.7 10.61 18.33 17.17 21.72 19.91